mRNA_L-elsbetiae_contig10185.233.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10185.233.1
Unique NamemRNA_L-elsbetiae_contig10185.233.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10185.233.1 vs. uniprot
Match: D7G2V0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2V0_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 3.010e-119
Identity = 168/207 (81.16%), Postives = 185/207 (89.37%), Query Frame = 3
Query:    9 KRFVSEMEQEYGRVDILVNNAGTAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKSSAGRIVNVASMSGHLSILESQSRKDAFTDPALTKEELSSMMTDFVADAKAGRHREQGWPNTCYGMSKLGLIAYTKVAAGAEQDAGSTVLVNACCPGYCDTDMTSHRGTLTPEEGARTPFMLAQMKSLQEGGFTGRFFRIGALSEW 629
            +RF SE+EQE+GR D+LVNNAG AFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKS AGR+VNVASM+GHLSIL SQ R++AFT+PALTKE LS+MM  FV D KAGRH+  GWPNTCYGMSKLG+IAYTKVAA  E++AGSTV +NACCPGYCDTDMTSHRGTLTPEEGARTPFML QMKS+ EGG TG FFR  AL+EW
Sbjct:   98 ERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKSDAGRVVNVASMAGHLSILGSQDRRNAFTNPALTKERLSAMMAQFVGDVKAGRHQGGGWPNTCYGMSKLGVIAYTKVAARVEREAGSTVTINACCPGYCDTDMTSHRGTLTPEEGARTPFMLTQMKSVDEGGLTGEFFRKEALAEW 304          
BLAST of mRNA_L-elsbetiae_contig10185.233.1 vs. uniprot
Match: A0A7S0XB88_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XB88_9STRA)

HSP 1 Score: 224 bits (570), Expect = 4.510e-69
Identity = 113/199 (56.78%), Postives = 141/199 (70.85%), Query Frame = 3
Query:    9 KRFVSEMEQEYGRVDILVNNAGTAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKSSAGRIVNVASMSGHLSILESQSRKDAFTDPALTKEELSSMMTDFVADAKAGRHREQGWPNTCYGMSKLGLIAYTKVAAGAEQDAGSTVLVNACCPGYCDTDMTSHRGTLTPEEGARTPFMLAQMKSLQEGGFTGRFF 605
            K FV++++ +YG+ D+LVNNA  AFKGSDPTPFK QAEPT+KTN+F T + T+ MLPL++ S++ RIVNVAS +G L IL S  RK  FT  +LT +EL+  M  FV D K  + +E  WP +CYG SKLG+IA TKV A    D    +L+NACCPGYC TDM+SHRGT T E GARTPF LA   +L  G  TG+FF
Sbjct:   85 KAFVNKLQSDYGKCDVLVNNAAIAFKGSDPTPFKLQAEPTIKTNYFGTLSLTKLMLPLLQNSTSPRIVNVASQAGALGILPSNERKKFFTSESLTVDELTEAMNQFVNDVKNDKLKENDWPGSCYGTSKLGVIALTKVLARNYPD----ILINACCPGYCQTDMSSHRGTRTAENGARTPFYLA---TLTAGSVTGKFF 276          
BLAST of mRNA_L-elsbetiae_contig10185.233.1 vs. uniprot
Match: A0A7S2UVT3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVT3_9STRA)

HSP 1 Score: 219 bits (558), Expect = 4.200e-67
Identity = 111/195 (56.92%), Postives = 142/195 (72.82%), Query Frame = 3
Query:    9 KRFVSEMEQEYGRVDILVNNAGTAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKSSAGRIVNVASMSGHLSILESQSRKDAFTDPALTKEELSSMMTDFVADAKAGRHREQGWPNTCYGMSKLGLIAYTKVAAGAEQDAGSTVLVNACCPGYCDTDMTSHRGTLTPEEGARTPFMLAQMK-SLQEGGF 590
            +RF+ EM+ EYGR+D+LVNNA  AFKG+DPTPF+ QA PTL+TNF+ T   T+ +LPL+R+S A RIVNVASMSGHL IL S  R+D F+  +LT+  L  +M  F AD +AG H + GWP+TCYGMSKLG+IA+TK+ A  E      ++VN CCPG C TDM+S  G+ T EEGARTP++L QM    + GGF
Sbjct:   98 QRFMQEMQSEYGRLDVLVNNAAIAFKGADPTPFQYQAAPTLRTNFWATVQVTDALLPLLRQSPAARIVNVASMSGHLRIL-SHERQDIFSSSSLTRPVLYDLMRAFEADVQAGVHHQNGWPSTCYGMSKLGVIAFTKILAREEPG----MVVNCCCPGGCRTDMSSGSGSKTAEEGARTPYLLTQMPPGTKSGGF 287          
BLAST of mRNA_L-elsbetiae_contig10185.233.1 vs. uniprot
Match: A0A7S2U7F4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7F4_9STRA)

HSP 1 Score: 212 bits (540), Expect = 1.700e-65
Identity = 109/205 (53.17%), Postives = 138/205 (67.32%), Query Frame = 3
Query:   15 FVSEMEQEYGRVDILVNNAGTAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKSSAGRIVNVASMSGHLSILESQSRKDAFTDPALTKEELSSMMTDFVADAKAGRHREQGWPNTCYGMSKLGLIAYTKVAAGAEQDAGSTVLVNACCPGYCDTDMTSHRGTLTPEEGARTPFMLAQMKSLQEGGFTGRFFRIGALSEW 629
            F  +ME+ +G+VD+LVNNAG AFKG+DPTPFK+Q +PTL  NF  T  FTE+MLPL+RK S  RIVNVAS SGHL  L S+  +D F+ P+LT  EL+ ++ +F +D + G+HRE GW N+ YGMSKL LIA TKV A  E      + VN CCPGYCDTDMTSH+G   P+EGA+   + A M+    G F   F     + EW
Sbjct:   17 FRQQMEENFGKVDVLVNNAGLAFKGADPTPFKEQTKPTLDINFRGTINFTEQMLPLLRKGSDARIVNVASGSGHLGQLPSKELRDKFSAPSLTMPELNQLVDNFESDVQQGKHRETGWGNSNYGMSKLALIAATKVLAREE---APRIAVNCCCPGYCDTDMTSHKGHRHPKEGAKNAIIPATMEDPPYGEFFSDF----KVGEW 214          
BLAST of mRNA_L-elsbetiae_contig10185.233.1 vs. uniprot
Match: K0SJD2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SJD2_THAOC)

HSP 1 Score: 209 bits (532), Expect = 1.440e-64
Identity = 105/192 (54.69%), Postives = 131/192 (68.23%), Query Frame = 3
Query:   27 MEQEYGRVDILVNNAGTAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKSSAGRIVNVASMSGHLSILESQSRKDAFTDPALTKEELSSMMTDFVADAKAGRHREQGWPNTCYGMSKLGLIAYTKVAAGAEQDAGSTVLVNACCPGYCDTDMTSHRGTLTPEEGARTPFMLAQMKSLQEGGFTGRF 602
            M + YG+VD+LVNNAG AFKGSDPTPF+ Q +PTL  NF+ T  FTE+MLPL+RK +  RIVNVASM+GHL  L S+  +  F+ P LTK+EL S++ +F  D  +GRH E GW N+ YGMSKL LIA TK+ A  E+     + VN CCPGYC TDM+SHRG   P EGAR   + A M+S   G +   F
Sbjct:    1 MTERYGKVDVLVNNAGIAFKGSDPTPFEGQCKPTLAVNFWGTVDFTEEMLPLLRKGNDARIVNVASMAGHLGQLRSRGLQRKFSSPDLTKDELFSLVEEFQRDVLSGRHTEAGWGNSNYGMSKLALIAMTKIWAREEE---GDISVNCCCPGYCATDMSSHRGNRHPSEGARNALIPAMMESAPSGEYFADF 189          
BLAST of mRNA_L-elsbetiae_contig10185.233.1 vs. uniprot
Match: A0A7S3GV84_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GV84_9STRA)

HSP 1 Score: 210 bits (534), Expect = 8.660e-64
Identity = 106/209 (50.72%), Postives = 143/209 (68.42%), Query Frame = 3
Query:   12 RFVSEMEQEYGRVDILVNNAGTAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKSSAGRIVNVASMSGHLSILESQSRKDAFTD-PALTKEELSSMMTDFVADAKAGRHREQGWPNTCYGMSKLGLIAYTKVAAGAEQDA--GSTVLVNACCPGYCDTDMTSHRGTLTPEEGARTPFMLAQMKSLQEGGFTGRFFRIGALSEW 629
            RF  ++  EYG VDILVNNA  AFK SDPTPFK+Q  PT++ NFF T   TE ++PL++K+ + RIVNVAS SGHL IL+S+  K+ F + P++  + L +++ ++V+  + G H E+GWPN+ YG+SKL +IA T++ A  E +A  G   L+NACCPGYCDTDMTSH+G    E GARTP MLA +  +     TG+FF   A  EW
Sbjct:   67 RFSRDISDEYGHVDILVNNAAIAFKESDPTPFKEQTLPTIEPNFFGTMRITESLMPLLQKAESPRIVNVASQSGHLRILKSEELKERFVNCPSI--DALENLVNEYVSSVQDGTHTEKGWPNSNYGISKLAVIALTRILAKREAEANPGKNFLINACCPGYCDTDMTSHKGPRPAEHGARTPAMLALLSEVGPVAPTGKFFFDEAEVEW 273          
BLAST of mRNA_L-elsbetiae_contig10185.233.1 vs. uniprot
Match: A0A7S0F9Q4_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0F9Q4_9DINO)

HSP 1 Score: 210 bits (535), Expect = 1.690e-63
Identity = 108/205 (52.68%), Postives = 144/205 (70.24%), Query Frame = 3
Query:   15 FVSEMEQEYGRVDILVNNAGTAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKSSAGRIVNVASMSGHLSILESQSRKDAFTDPALTKEELSSMMTDFVADAKAGRHREQGWPNTCYGMSKLGLIAYTKVAAGAEQDAGSTVLVNACCPGYCDTDMTSHRGTLTPEEGARTPFMLAQMKSLQEGGFTGRFFRIGALSEW 629
            FV  +  +YGR+D+LVNNA  AFKG+DPTPF+ Q  PTL+TNF+ T A T+++LPL+R+  + R+VNVASM+G L  + S S +  F+ PALT++EL +++  F  D  AGRHR++GW N+ YG+SKL LIAYT + A  E   G+ +  NACCPGYCDTDM+SHRG  +P EGAR   MLA    L++ G TG F R   +SEW
Sbjct:  110 FVQYIASKYGRLDVLVNNAAIAFKGADPTPFQGQTLPTLRTNFWGTVALTDQLLPLLRRGRSPRVVNVASMAGRLGQV-SGSLQRRFSSPALTRDELFALVRKFQDDVAAGRHRQEGWGNSNYGLSKLALIAYTLLVAREE---GNAMRANACCPGYCDTDMSSHRGPRSPAEGARNATMLAL---LRDDGPTGAFVRDMQISEW 307          
BLAST of mRNA_L-elsbetiae_contig10185.233.1 vs. uniprot
Match: W7T5T2_9STRA (Carbonyl reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T5T2_9STRA)

HSP 1 Score: 208 bits (530), Expect = 2.020e-62
Identity = 109/215 (50.70%), Postives = 141/215 (65.58%), Query Frame = 3
Query:    9 KRFVSEMEQEYGRVDILVNNAGTAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKSSAGR-IVNVASMSGHLSILESQSRKDA-FTDPALTKEELSSMMTDFVADAKAGRHREQGWPNTCYGMSKLGLIAYTKVAA------GAEQDAGSTVLVNACCPGYCDTDMTSHRGTLTPEEGARTPFMLAQMKSLQEGGFTGRFFRIGALSEW 629
            + FV E++++YGR DILVNNAG AFKG DPTPF+DQA PT KTNF+ T    + M PL+RKS+    IVNVAS SG LSIL++   K A  + P LT++ L  ++  F  D + G H E GWPNTCYGMSKL LIA+ +V A      G E++  +++ + +CCPG+CDTDM+SH G  T E GARTP  LA M+  Q+G   G FF      +W
Sbjct:  120 EHFVKEIQKDYGRADILVNNAGIAFKGRDPTPFRDQAAPTFKTNFWGTVELIDAMTPLLRKSTGCPCIVNVASQSGRLSILDTDRGKQAEISSPILTRDRLFELVRQFEHDVRTGTHAENGWPNTCYGMSKLALIAFGRVFARNEMEGGTEKEGKTSIWLASCCPGWCDTDMSSHSGPRTAEHGARTPAWLA-MEGRQQGATAGGFFYDEKEIQW 333          
BLAST of mRNA_L-elsbetiae_contig10185.233.1 vs. uniprot
Match: K0TIM0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIM0_THAOC)

HSP 1 Score: 211 bits (536), Expect = 3.570e-62
Identity = 106/196 (54.08%), Postives = 133/196 (67.86%), Query Frame = 3
Query:   15 FVSEMEQEYGRVDILVNNAGTAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKSSAGRIVNVASMSGHLSILESQSRKDAFTDPALTKEELSSMMTDFVADAKAGRHREQGWPNTCYGMSKLGLIAYTKVAAGAEQDAGSTVLVNACCPGYCDTDMTSHRGTLTPEEGARTPFMLAQMKSLQEGGFTGRF 602
            F++ M + YG+VD+LVNNAG AFKGSDPTPF+ Q +PTL  NF+ T  FTE+MLPL+RK S  RIVNVASM+GHL  L S+  +  F+ P LTK+EL S++ +F  D  +GRH   GW N+ YGMSKL LIA TK+ A  E+     + VN CCPGYC TDM+SHRG   P EGAR   + A M+S   G +   F
Sbjct:   99 FIAGMTERYGKVDVLVNNAGIAFKGSDPTPFEGQCKPTLAVNFWGTVDFTEEMLPLLRKGSDARIVNVASMAGHLGQLRSRELQRKFSSPDLTKDELFSLVEEFQRDVLSGRHTGAGWGNSNYGMSKLALIAMTKIWAREEE---GDISVNCCCPGYCATDMSSHRGNRHPSEGARNALIPAMMESAPSGEYFADF 291          
BLAST of mRNA_L-elsbetiae_contig10185.233.1 vs. uniprot
Match: A0A7S2A0J2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A0J2_TRICV)

HSP 1 Score: 204 bits (519), Expect = 3.210e-61
Identity = 106/207 (51.21%), Postives = 138/207 (66.67%), Query Frame = 3
Query:    9 KRFVSEMEQEYGRVDILVNNAGTAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKSSAGRIVNVASMSGHLSILESQSRKDAFTDPALTKEELSSMMTDFVADAKAGRHREQGWPNTCYGMSKLGLIAYTKVAAGAEQDAGSTVLVNACCPGYCDTDMTSHRGTLTPEEGARTPFMLAQMKSLQEGGFTGRFFRIGALSEW 629
            + F + +E+ YG++D+L NNA TAFKGSDPTPF+ Q +PTL  NF  T   T ++LPLVR+ +  RIVNVASM+GHLS L S+  +D F+ P LT  EL  ++  F AD KAG H ++GW N+ YG+SKL +IA T+V   A ++A + V VN CCPG CDTDMTSHRG   P +GA+   + A MK       TG+FFR    SEW
Sbjct:   97 RNFRNVVEERYGKIDVLCNNAATAFKGSDPTPFEAQCKPTLDVNFRGTVDLTLELLPLVRRGTDARIVNVASMAGHLSQLRSKELRDQFSAPDLTMSELRGLVDKFEADVKAGTHAQEGWGNSNYGLSKLAVIAATRV--WAREEAKNGVTVNCCCPGCCDTDMTSHRGPRHPADGAKNAVLPATMKDPP----TGQFFRDLRPSEW 297          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10185.233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2V0_ECTSI3.010e-11981.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0XB88_9STRA4.510e-6956.78Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S2UVT3_9STRA4.200e-6756.92Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2U7F4_9STRA1.700e-6553.17Hypothetical protein n=1 Tax=Attheya septentrional... [more]
K0SJD2_THAOC1.440e-6454.69Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3GV84_9STRA8.660e-6450.72Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S0F9Q4_9DINO1.690e-6352.68Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
W7T5T2_9STRA2.020e-6250.70Carbonyl reductase n=2 Tax=Monodopsidaceae TaxID=4... [more]
K0TIM0_THAOC3.570e-6254.08Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2A0J2_TRICV3.210e-6151.21Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10185contigL-elsbetiae_contig10185:169..3956 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score346.7
Seed ortholog evalue7.5e-93
Seed eggNOG ortholog2880.D7G2V0
KEGG rclassRC00154,RC00205,RC00823,RC01491
KEGG koko:K00079
KEGG ReactionR02581,R02975,R04285,R09420
KEGG Pathwayko00590,ko00790,ko00980,ko01100,ko05204,map00590,map00790,map00980,map01100,map05204
Hectar predicted targeting categoryother localisation
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
EC1.1.1.184,1.1.1.189,1.1.1.197
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons6
Model size817
Cds size606
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10185.233.1prot_L-elsbetiae_contig10185.233.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10185 195..3771 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815249.0149448-UTR-L-elsbetiae_contig10185:168..1941622815249.0149448-UTR-L-elsbetiae_contig10185:168..194Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10185 169..194 +
1691682795.0440068-UTR-L-elsbetiae_contig10185:168..1941691682795.0440068-UTR-L-elsbetiae_contig10185:168..194Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10185 169..194 +
1622815249.0992796-UTR-L-elsbetiae_contig10185:3771..39561622815249.0992796-UTR-L-elsbetiae_contig10185:3771..3956Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10185 3772..3956 +
1691682795.1286225-UTR-L-elsbetiae_contig10185:3771..39561691682795.1286225-UTR-L-elsbetiae_contig10185:3771..3956Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10185 3772..3956 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815249.0296133-CDS-L-elsbetiae_contig10185:194..2771622815249.0296133-CDS-L-elsbetiae_contig10185:194..277Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10185 195..277 +
1691682795.0576172-CDS-L-elsbetiae_contig10185:194..2771691682795.0576172-CDS-L-elsbetiae_contig10185:194..277Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10185 195..277 +
1622815249.0417862-CDS-L-elsbetiae_contig10185:673..7541622815249.0417862-CDS-L-elsbetiae_contig10185:673..754Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10185 674..754 +
1691682795.0662198-CDS-L-elsbetiae_contig10185:673..7541691682795.0662198-CDS-L-elsbetiae_contig10185:673..754Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10185 674..754 +
1622815249.052341-CDS-L-elsbetiae_contig10185:1281..13861622815249.052341-CDS-L-elsbetiae_contig10185:1281..1386Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10185 1282..1386 +
1691682795.0744846-CDS-L-elsbetiae_contig10185:1281..13861691682795.0744846-CDS-L-elsbetiae_contig10185:1281..1386Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10185 1282..1386 +
1622815249.0644572-CDS-L-elsbetiae_contig10185:2474..25981622815249.0644572-CDS-L-elsbetiae_contig10185:2474..2598Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10185 2475..2598 +
1691682795.0832715-CDS-L-elsbetiae_contig10185:2474..25981691682795.0832715-CDS-L-elsbetiae_contig10185:2474..2598Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10185 2475..2598 +
1622815249.0773673-CDS-L-elsbetiae_contig10185:3161..32221622815249.0773673-CDS-L-elsbetiae_contig10185:3161..3222Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10185 3162..3222 +
1691682795.0945036-CDS-L-elsbetiae_contig10185:3161..32221691682795.0945036-CDS-L-elsbetiae_contig10185:3161..3222Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10185 3162..3222 +
1622815249.0887794-CDS-L-elsbetiae_contig10185:3619..37711622815249.0887794-CDS-L-elsbetiae_contig10185:3619..3771Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10185 3620..3771 +
1691682795.1133525-CDS-L-elsbetiae_contig10185:3619..37711691682795.1133525-CDS-L-elsbetiae_contig10185:3619..3771Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10185 3620..3771 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10185.233.1

>prot_L-elsbetiae_contig10185.233.1 ID=prot_L-elsbetiae_contig10185.233.1|Name=mRNA_L-elsbetiae_contig10185.233.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp
MEQEYGRVDILVNNAGTAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKML
PLVRKSSAGRIVNVASMSGHLSILESQSRKDAFTDPALTKEELSSMMTDF
VADAKAGRHREQGWPNTCYGMSKLGLIAYTKVAAGAEQDAGSTVLVNACC
PGYCDTDMTSHRGTLTPEEGARTPFMLAQMKSLQEGGFTGRFFRIGALSE
W*
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mRNA from alignment at L-elsbetiae_contig10185:169..3956+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10185.233.1 ID=mRNA_L-elsbetiae_contig10185.233.1|Name=mRNA_L-elsbetiae_contig10185.233.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3788bp|location=Sequence derived from alignment at L-elsbetiae_contig10185:169..3956+ (Laminarionema elsbetiae ELsaHSoW15)
GTTTTCCGAAGCGTTTCGTGTCGGAGATGGAGCAGGAGTACGGGAGGGTC GACATCCTCGTGAACAACGCCGGAACTGCTTTCAAGGGCTCCGATCCGAC TCCGTTCAAGTAAAAAGATACATAGTCTAGAGTGTGACCGCCTCCTCTCC CCCTTTTTTAATCTGCGCTCATTTGCCCTGCTACCAAAAATAATGGACTT GTCAACGTCCTCCGCAGTGTGTTCGTTTTCAAACGAGAGATAGACGCCCC GATTAGCTCTGGGATATGGCGGTGAGGGTCGGGAAGATTTGGTGGCTTTC CTAAGGTAGCTGATCACGCAGCTCTGGCAGAGGGATGACGGGGAGACCAA GCGCCCACGGGTCTCCCTGCCCTCAACCTTGTATTTCGCTTGTCGGATTT CCGCGCAAGGGCTGTGTCCGTCCTAGTCAAAATACACCCTCGTCATTTGG GGCCTTCCCGCTTCTTATTTCTCGGCGTGCCGCGGGGTAATTGCTCTTCT CTCAGGGATCAGGCCGAGCCCACTCTGAAGACGAACTTTTTCGACACTGC GGCCTTCACGGAAAAGATGCTCCCTCTCGTCAGAAAGTGAGCGGATGTCA CTCTACGTATGTAGTATGTCACAGAGCGGTGGCCCTTCAAGCACCAAGCC CTATGTCTACCTCCTCACGGCATGGCGCCATCGCCCATCCAACCACAACA TTTGCGCGGAAGAACAAAAGGAATTCCAGATCACGAAAAACGTCGGGTCT TGAGCATGTGGTGACCTATCGTGAAGCTGTTTCATACCCTGTCTCACGAT TCATCGCTTTGTTGATAATAACAAACGGGTCTCCACCCGGCACGAAGTGC TCCATGTCGTGGCGGCGGCACTCTTGGAATACGAACGGGGTGAAATTGAT TGCGTGATGCGCATATTCCCGCGGGTTTTCGCCGGTGTTGCGCGCTGTAG ACCCACTTTTGGAACGCATTGGGGGTAGTTGAACTTGGCAGGTTCAGGAG CTGATATTTATGGGCTCAGCAGGGGCTCAAGCCACGCACACCCTCCGCTA GGATCGATATACGGTGATACAAATTTTGCCGGTGTACCAAAATCTTGACA AACCCGACCACAGGAGCAGCGCCGGTCGGATCGTCAACGTCGCCAGCATG AGCGGGCACCTGTCCATCTTGGAAAGCCAGAGCCGGAAAGATGCCTTCAC CGACCCTGCCCTCACGAAGTGAGACCCGTATATCCCCCCTGTCGTCGTTG TCGTTGTTATTTGTCGCTACTGTTGTTCACATTTGGCATGCGTGCAAAAT AAAGGCAGAGAGGGAAGCGGAGGGGTTGGGCGTGGGTGAGACATGAAGAA GAAAGTCCTTTGCCCCTCGTTTTTTCCTTTTTTTTTCGGTATTCGTCGAG AAAACTATGATACCGAACGGGAAATAGTTCTGCTTCCCGTCGCCGCCCCT CCTTCCGCAGCTCGTCACCCATTGCCCCGCAACAGCAGGGGTGGGGTAGG GGGTCCTTACAAAGATAATGGTTGTGGTGTAAATAGAGAGAGAGAGAGAG AGGATGCCTTCCAGGTTTTGAGAACCGAAGGCCATCAATGTTTGTCGAAA CCCTAGTATACTTTCACCAAACGTTCCACCGCATTTTTGGTATGCGCGTG TTGCTGCCTTCCTCTCTCCTCCCGCGGAAGCTTTTTCCCATAGCAGCGCA CGAACAAGATACAGACAGAGTAACACTCACGCATATACACACGCACAGAG ATAGGGGGGTGGGTAGAGAGAGAGGCAGAGAGACACAGAGAGACAAATAC AGAGTGGAGACACCAATCTCTCCGCGCCTGAAATCACAGCGCCGGGTCGA CCACACGGACCATGCGGACGCTGCAGACATGTCCACGAAGGCAGAGGAGG AACAGCTAGTACGGGTGGAAGCAGCAGTGGTGCGTTCGGGGAAGGGGCCT TTGGACATGTCACAGGAGATGAGCAGATGAGCACTGATTATCTGTTTCGT CTGCGGAGTGGGGGCGTCTCTCCTGTCCCATGGTTGAACTTCTTCCGAAC CCAGATCTTTGCGAAAAACCATGGGAGCTTTTTCTGGGGTTCCGCAAAGT GCAGCCGCGAAATGCGGAAGCGAAATCATCCGGTGTTACATCGATGGCGT TGGTAAAGATATGACCGGCCGGGGTGAAGCAGTTCCAAAGTATAACTGTT CACGCACGCAGGCTTGTCCATACGAACCATATTTTGGCGCCGATCAAGCG TGTGGTGGTTGCGGTGATACCCACTATGTTTCTCACTCGATAACGCACTG GTGCAGGGAGGAGCTCTCTTCCATGATGACGGACTTCGTCGCCGACGCCA AGGCCGGTCGGCACCGCGAGCAAGGGTGGCCTAACACCTGCTACGGCATG AGCAAGCTTGGCCTGATCGCCTACACGAAAGTGAGAGCGAGAGTTGATGA CCGTTGCCGTCTTCGCCGGGAACACTATCGCTACGCCCTTCTGCCGTACA ACCACTGCTGTCCGCATCGGCTGTCGATATTGTTTCGTCTATTGTCCGGC AGGCGGCCTTATCCTCCACCCTCATTTCGTCATTTTCTTCTTTGCACAGG CGGTTTTGTCTCAAGTCCCACCGCTCCACGTGGGGCATACACAAGGCCCG TGTTCTCGCTTCCATCCGTATTTATTTATGGTTCGGTTGTGTTACTTGGG GCCAGCACCCTTGTGCCTTGCAAGCAAGTACATATGAATGCCTTATTAAC GCCATTACCCGCTACCAGGTTCCAGTCCCTTCCGCTAGTCAACAGATCCA ACAAGACAGTTTAACGATAACAGGGAATCAATCACCCACGAGGAGCGTGT TCCAGCGAAATGTTTTGCCATATGTGCATGGTCTAGGATATACATCCCCG TCCAATCGCGAAGAGTATGCAACAAAACTTGGAGATGTGAAGAAGTGTCG CCGTCATGTGCCTGATTTGTTTTTCTCGCCGGCGCTTACGCAGGTTGCCG CGGGAGCCGAACAAGATGCAGGCTCGACGGTGCTGGTGAACGCATGCTGC CCAGGTGACGCACTCATATTTCGCGTCTCTTCGTTTGTCTTGGAGGGGAA AGTACCCTCCGTGCCTTGGTGGCGATGTGATTTTTCTTGTTTTTCTGGTG TGGGCTTTTCCCCCTATTCGACGTTTTGTGTTTGCTGTCCGCGTCATGCA GACGCGAGGCCCCGCCACTCACGGAGCGCACGTCACGGCACTCTCTCGAG CTTGCCGAATAGCTCTTTCGATGATAAGAACCTCACACGGTCGCCCCCCT CCCCATTATCCATAACATGCTGTTGCATTCCTCCGTCTTGCTTGTCGCCA AGCTCCACCTGCCGCCCATGTTCCGATCCACACTAACGCGCACAGTTTCG TCGACCACTGCATAACCACCCCTCGTACACGCGCTCGCACACGCACCACA GGGTACTGCGATACTGACATGACATCTCACCGCGGGACGCTGACCCCGGA GGAAGGGGCGCGCACGCCGTTCATGCTGGCGCAGATGAAGAGCCTCCAAG AAGGCGGGTTTACCGGGAGGTTCTTCCGCATAGGAGCTCTGTCGGAGTGG TAGACGAGCAAGAGGCAGGAAGCCCAGGGAGGAAAGAAAGGGCAATAACC TTTGAGGGAGGGATGTGGTGCAGTTTGTCGGGCGGGTATCTACATAGGAG GTCTACACATCAACAGTGGCAAAGGGGAAAAGAAGAAGCACCGCACGTGG AGGGACGTTGTAAATCGATTGCATCAGAGTGGCAGGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10185:169..3956+

>mRNA_L-elsbetiae_contig10185.233.1 ID=mRNA_L-elsbetiae_contig10185.233.1|Name=mRNA_L-elsbetiae_contig10185.233.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig10185:169..3956+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGCAGGAGTACGGGAGGGTCGACATCCTCGTGAACAACGCCGGAAC
TGCTTTCAAGGGCTCCGATCCGACTCCGTTCAAATGGAGCAGGAGTACGG
GAGGGTCGACATCCTCGTGAACAACGCCGGAACTGCTTTCAAGGGCTCCG
ATCCGACTCCGTTCAAGGATCAGGCCGAGCCCACTCTGAAGACGAACTTT
TTCGACACTGCGGCCTTCACGGAAAAGATGCTCCCTCTCGTCAGAAAGGA
TCAGGCCGAGCCCACTCTGAAGACGAACTTTTTCGACACTGCGGCCTTCA
CGGAAAAGATGCTCCCTCTCGTCAGAAAGAGCAGCGCCGGTCGGATCGTC
AACGTCGCCAGCATGAGCGGGCACCTGTCCATCTTGGAAAGCCAGAGCCG
GAAAGATGCCTTCACCGACCCTGCCCTCACGAAGAGCAGCGCCGGTCGGA
TCGTCAACGTCGCCAGCATGAGCGGGCACCTGTCCATCTTGGAAAGCCAG
AGCCGGAAAGATGCCTTCACCGACCCTGCCCTCACGAAGGAGGAGCTCTC
TTCCATGATGACGGACTTCGTCGCCGACGCCAAGGCCGGTCGGCACCGCG
AGCAAGGGTGGCCTAACACCTGCTACGGCATGAGCAAGCTTGGCCTGATC
GCCTACACGAAAGGAGGAGCTCTCTTCCATGATGACGGACTTCGTCGCCG
ACGCCAAGGCCGGTCGGCACCGCGAGCAAGGGTGGCCTAACACCTGCTAC
GGCATGAGCAAGCTTGGCCTGATCGCCTACACGAAAGTTGCCGCGGGAGC
CGAACAAGATGCAGGCTCGACGGTGCTGGTGAACGCATGCTGCCCAGGTT
GCCGCGGGAGCCGAACAAGATGCAGGCTCGACGGTGCTGGTGAACGCATG
CTGCCCAGGGTACTGCGATACTGACATGACATCTCACCGCGGGACGCTGA
CCCCGGAGGAAGGGGCGCGCACGCCGTTCATGCTGGCGCAGATGAAGAGC
CTCCAAGAAGGCGGGTTTACCGGGAGGTTCTTCCGCATAGGAGCTCTGTC
GGAGTGGTAGGGTACTGCGATACTGACATGACATCTCACCGCGGGACGCT
GACCCCGGAGGAAGGGGCGCGCACGCCGTTCATGCTGGCGCAGATGAAGA
GCCTCCAAGAAGGCGGGTTTACCGGGAGGTTCTTCCGCATAGGAGCTCTG
TCGGAGTGGTAG
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