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Homology
BLAST of mRNA_L-elsbetiae_contig10117.167.1 vs. uniprot
Match: D8LKE8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE8_ECTSI) HSP 1 Score: 428 bits (1100), Expect = 5.310e-146 Identity = 205/257 (79.77%), Postives = 227/257 (88.33%), Query Frame = 1
Query: 1 KVKEGLEGATIVALASGDCQMIALDISGKVYGWGCYKDKEGKQWFQPPSGSSSKACKGASKSPVLISGLPSNVVDIKCGASFCVALAAKGDVLSWGIGEIGELGRDVCSMKAPAVPGSDDEPPYDFDGILRDHLTPGGMYREAADGGGARMENVKAIGCGEYHSMVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVEDLGGRNTMAAAGGAQHSLVLTTEGLFSFGRNDSGQLGCTASLSKDDWGAFEKNPMKV 771
+VKEGLEGATI+ LASGDCQ IALD+SGKVYGWGC+KDKEGKQWFQ P+ SKACKGA+K P++ISGLP +V DIKCG SFC+AL G+VLSWGIGEIGELGR+VCSMK P VPGSD+EPPYDFDGI RDHLTP GMYR A DGG ARMENVKAIGCG++HS++VTRADADVYACGLNSYGQLGLGDTDNRKRLALV DL NTMA AGG HSLVLTTEGLFSFGR DSGQLGCTA+++K DWGAFE +PM+V
Sbjct: 194 EVKEGLEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQAPADKGSKACKGAAKRPIVISGLPPHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGREVCSMKVPPVPGSDEEPPYDFDGIQRDHLTPAGMYRAAEDGG-ARMENVKAIGCGDFHSLLVTRADADVYACGLNSYGQLGLGDTDNRKRLALVRDLAALNTMAVAGGGMHSLVLTTEGLFSFGRKDSGQLGCTAAINKGDWGAFETSPMEV 449
BLAST of mRNA_L-elsbetiae_contig10117.167.1 vs. uniprot
Match: A0A835YVE8_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE8_9STRA) HSP 1 Score: 198 bits (504), Expect = 5.800e-57 Identity = 114/253 (45.06%), Postives = 147/253 (58.10%), Query Frame = 1
Query: 16 LEGATIVALASGDCQMIALDISGKVYGWGCYKDKEGKQWFQPPSGSSSKACKGASKSPVLISGLPSNVVDIKCGASFCVALAAKGDVLSWGIGEIGELGRDVCSMKAPAVPGSDD-EPPYDFDGILRDHLTPGGMYREAADGG-GARMENVKAIGCGEYHSMVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVEDLGGRNTMAAAGGAQHSLVLTTEG-LFSFGRNDSGQLGCTASLSKDDWGAFEKNPM 765
+ G I +A+GDCQ +A+ +SGKVY WGC+KDKEGKQW P K K ++P+++ L V +++C AS VAL G + SWGIGE ELGR C +K + E YDF I++DHLTPG MY + + KAIGCG YH++ VT A A V+ CGLN+YGQLG GDTDNR+ L V L G + GG HSL L G + +FGR+D GQLG S+ D GA P+
Sbjct: 149 MRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQWQTPLPREGPKTAKRKQETPMVVVSLD-RVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGS----SEVDKGAGGSEPL 396
BLAST of mRNA_L-elsbetiae_contig10117.167.1 vs. uniprot
Match: H3GSC6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSC6_PHYRM) HSP 1 Score: 192 bits (487), Expect = 3.140e-54 Identity = 112/255 (43.92%), Postives = 152/255 (59.61%), Query Frame = 1
Query: 13 GLEGATIVALASGDCQMIALDISGKVYGWGCYKDKEGKQWFQPPSGSSSKACKGASKSPVLISGLPSNVVDIKCGASFCVALAAKGDVLSWGIGEIGELGRDV-CSMKAPAVPGSDDEPPYDFDGILRDHLTPGGMYREAADGGGARMENVKAIGCGEYHSMVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVEDLGGRNTMAAAGGAQHSLVLTTEG-LFSFGRNDSGQLGCTASLSKDDWGAFEKNPMKV 771
G + AT V + GDC + ++GKVY WGCY+DKEGKQW S S ++ K P LI L NVVD++CG++F +A G V SWG+GE+G+LGR V MK D + Y + + R+HL P + G + VKAIGCG +HS+ T ++ +Y+CGLN+YGQLG+G T+N L LVEDL +N GG+ HS+VLT +G ++SFGR DSGQLG +L + G F+ P KV
Sbjct: 191 GPDQATAVQVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCD--SASPKESFKKKQVEPFLIKALD-NVVDVRCGSAFNLARTNDGRVYSWGLGEMGQLGRKVDAEMK-------DSKGDYKVEMVFREHLAPKPVML-----GKDPLPVVKAIGCGSFHSLFATSSNGYLYSCGLNNYGQLGIGSTENCTELQLVEDLSSKNVAYVDGGSHHSVVLTNDGDVYSFGRADSGQLG---TLETCNTGEFKDRPQKV 427
BLAST of mRNA_L-elsbetiae_contig10117.167.1 vs. uniprot
Match: D0N6R7_PHYIT (Regulator of chromosome condensation (RCC1)-like protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N6R7_PHYIT) HSP 1 Score: 192 bits (487), Expect = 3.880e-54 Identity = 110/254 (43.31%), Postives = 146/254 (57.48%), Query Frame = 1
Query: 13 GLEGATIVALASGDCQMIALDISGKVYGWGCYKDKEGKQWFQPPSGSSSKACKGASKSPVLISGLPSNVVDIKCGASFCVALAAKGDVLSWGIGEIGELGRDVCSMKAPAVPGSDDEPPYDFDGILRDHLTPGGMYREAADGGGARMENVKAIGCGEYHSMVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVEDLGGRNTMAAAGGAQHSLVLTTEG-LFSFGRNDSGQLGCTASLSKDDWGAFEKNPMKV 771
G + AT V + GDC + ++GKVY WGCY+DKEGKQW PS + A K P LI L N+ D++CG+SF +A G V SWG+GE+G+LGR V D + Y D + DHL P + G + VKAIGCG YHS+ ++ +Y CGLN+YGQLG+G+T+N L LVEDL +N GG+ HS+VLT +G +++FGR DSGQLG + S D F+ P KV
Sbjct: 192 GPQQATAVQVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCDAPS--AKDAFKKKQTEPFLIKALD-NIADVRCGSSFNLARTNDGRVYSWGLGEMGQLGRTVDDQM------KDFKGDYKVDMVYNDHLQP-----KPVTLGNDPLPVVKAIGCGSYHSLFALSSNGYLYTCGLNNYGQLGIGNTENCTELQLVEDLSSKNVAYVDGGSHHSVVLTIDGDVYTFGRADSGQLGMLETCSTGD---FKDRPQKV 428
BLAST of mRNA_L-elsbetiae_contig10117.167.1 vs. uniprot
Match: A0A7S2WNI2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNI2_9STRA) HSP 1 Score: 192 bits (488), Expect = 6.980e-54 Identity = 110/265 (41.51%), Postives = 155/265 (58.49%), Query Frame = 1
Query: 13 GLEGATIVALASGDCQMIALDISGKVYGWGCYKDKEGKQWFQ---PPSGSSSKACKGASKS---PVLISGLPSNVV-DIKCGASFCVALAAKGDVLSWGIGEIGELGRDVCSMKAPAVPGSDDEPPYDFDGILRDHLTPGGMYREAADGGGARMENVKAIGCGEYHSMVVTRADADVYACGLNSYGQLGLG----DTDNRKRLALVEDLGGRNTMAAAGGAQHSLVLTTEG-LFSFGRNDSGQLGCTASLSKDDWGAFEKNPMKV 771
GL+G +V ++ GDCQ + + + G VYGWGCYKD+EGK+WF PPS S +A K + P+ I LP +V D+ CGASF AL G VL+WG+GE+GELGR +MK D YD G+ RDH+TPG + G + +K++GCG YH VV+ + + VY+ GLN YGQLGLG N+ +L V+ L G+ GG HS+ LT +G +F++GR D GQLG + + G ++ +P++V
Sbjct: 242 GLQGEQVVHVSCGDCQTLVVTVDGNVYGWGCYKDREGKKWFDSSLPPSASPQEAVKTIKRQQDVPMKILALPETMVADLCCGASFNAALLKDGRVLTWGLGEVGELGRPAAAMKP-------DGAEYDKTGVFRDHVTPGAPVLAS----GEALPAMKSVGCGMYHLFVVSASGSSVYSAGLNVYGQLGLGYVGDGLSNKDKLEAVQSLDGQGVACCTGGNHHSMALTGDGRVFTWGRADYGQLGIARADTAA--GGYQASPIEV 493
BLAST of mRNA_L-elsbetiae_contig10117.167.1 vs. uniprot
Match: K3WZG0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZG0_GLOUD) HSP 1 Score: 191 bits (485), Expect = 7.920e-54 Identity = 111/258 (43.02%), Postives = 150/258 (58.14%), Query Frame = 1
Query: 13 GLEGATIVALASGDCQMIALDISGKVYGWGCYKDKEGKQWFQPPSGSSSKACKGASKSPVLISGLPSNVVDIKCGASFCVALAAKGDVLSWGIGEIGELGRDVCSMKAPAVPGSDDEPPYDFDGILRDHLTPGGMYREAADGGGARMENVKAIGCGEYHSMVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVEDLGGRNTMAAAGGAQHSLVLTTEG-LFSFGRNDSGQLGCTASLSKDDWGAFEKNPMKVCGVG 783
G A V + GDC + ++G+VY WG YKDKEGKQW + S+S K P LI G+ +N VD++CG+SF V +G V SWG+GE+G+LGR+V + A G Y D + DHLTP M G + VKAIGCG YHS+V A+ +Y GLN+YGQLG+G T+N+ +L LV+DL +N + GG HS+VLT +G +++FGR DSGQLG + D F+ P KV +G
Sbjct: 203 GPAAACAVQIVGGDCHTAVVTLTGQVYTWGSYKDKEGKQWCDAATPSAS--FKQKQVRPFLIKGV-NNAVDVRCGSSFNVVRTNEGHVYSWGLGEMGQLGREVNAEMKDATTGD-----YLVDMVFHDHLTPARMML-----GKEPLPAVKAIGCGSYHSLVALAANGYLYTTGLNNYGQLGIGSTENQVKLQLVDDLATKNIASVEGGTHHSVVLTNDGDVYTFGRADSGQLGAQDTCQTGD---FKDRPQKVEFLG 444
BLAST of mRNA_L-elsbetiae_contig10117.167.1 vs. uniprot
Match: A0A0W8D136_PHYNI (Regulator of chromosome condensation n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D136_PHYNI) HSP 1 Score: 189 bits (480), Expect = 4.190e-53 Identity = 109/254 (42.91%), Postives = 146/254 (57.48%), Query Frame = 1
Query: 13 GLEGATIVALASGDCQMIALDISGKVYGWGCYKDKEGKQWFQPPSGSSSKACKGASKSPVLISGLPSNVVDIKCGASFCVALAAKGDVLSWGIGEIGELGRDVCSMKAPAVPGSDDEPPYDFDGILRDHLTPGGMYREAADGGGARMENVKAIGCGEYHSMVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVEDLGGRNTMAAAGGAQHSLVLTTEG-LFSFGRNDSGQLGCTASLSKDDWGAFEKNPMKV 771
G + AT V + GDC + ++GKVY WGCY+DKEGKQW PS + A K P LI L N+ D++CG+SF + G V SWG+GE+G+LGR V D + Y D + +HL P + G + VKAIGCG YHS+ ++ +Y+CGLN+YGQLG+G T+N L LVEDL +N GGA HS+VLT +G +++FGR DSGQLG +L + G F+ P KV
Sbjct: 192 GPQQATAVQVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCDAPS--AKDAFKKKQPEPFLIKSLD-NIADVRCGSSFNLVRTNDGRVYSWGLGEMGQLGRIVDDKM------KDSKGDYKVDMVYTEHLQPKPVML-----GNNPLPAVKAIGCGSYHSLFSLSSNGYLYSCGLNNYGQLGIGSTENCTELQLVEDLSSKNVAYVDGGAHHSVVLTNDGDVYTFGRADSGQLG---TLETCNTGEFKDRPQKV 428
BLAST of mRNA_L-elsbetiae_contig10117.167.1 vs. uniprot
Match: A0A0P1AXU7_PLAHL (FOG: RCC1 domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AXU7_PLAHL) HSP 1 Score: 189 bits (480), Expect = 4.190e-53 Identity = 110/255 (43.14%), Postives = 146/255 (57.25%), Query Frame = 1
Query: 13 GLEGATIVALASGDCQMIALDISGKVYGWGCYKDKEGKQWFQPPSGSSSKACKGASKSPVLISGLPSNVVDIKCGASFCVALAAKGDVLSWGIGEIGELGRDV-CSMKAPAVPGSDDEPPYDFDGILRDHLTPGGMYREAADGGGARMENVKAIGCGEYHSMVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVEDLGGRNTMAAAGGAQHSLVLTTEG-LFSFGRNDSGQLGCTASLSKDDWGAFEKNPMKV 771
G + A + + GDC + ++G+VY WGCY+DKEGKQW S + A K P LI L N+ D++CG+SF + G V SWG+GE+G+LGR+V MK D + Y D + RDHL P + G + VKAIGCG YHS+ A+ +Y+CGLN+YGQLG+G+TDN L LVEDL +N GG HS+VLT +G +++FGR DSGQLG S G F+ P KV
Sbjct: 192 GPQDAIAIQVVGGDCHTAVVTLAGEVYTWGCYRDKEGKQWCDARS--AKDAFKRKQTRPFLIKALD-NIADVRCGSSFNLVRTNDGRVYSWGLGEMGQLGREVDAEMK-------DAKGDYKVDMVYRDHLQPKPVML-----GKDPLPVVKAIGCGSYHSLFAVSANGYLYSCGLNNYGQLGIGNTDNSSELQLVEDLSSKNVAFVDGGTHHSVVLTNDGDVYTFGRADSGQLGVLESCCT---GEFKDRPQKV 428
BLAST of mRNA_L-elsbetiae_contig10117.167.1 vs. uniprot
Match: G4YWG2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YWG2_PHYSP) HSP 1 Score: 188 bits (478), Expect = 8.370e-53 Identity = 111/255 (43.53%), Postives = 147/255 (57.65%), Query Frame = 1
Query: 13 GLEGATIVALASGDCQMIALDISGKVYGWGCYKDKEGKQWFQPPSGSSSKACKGASKSPVLISGLPSNVVDIKCGASFCVALAAKGDVLSWGIGEIGELGRDV-CSMKAPAVPGSDDEPPYDFDGILRDHLTPGGMYREAADGGGARMENVKAIGCGEYHSMVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVEDLGGRNTMAAAGGAQHSLVLTTEG-LFSFGRNDSGQLGCTASLSKDDWGAFEKNPMKV 771
G E AT V + GDC + ++G+VY WGCY+DKEGKQW PS + A K P LI L N+ D+KCG +F +A G V SWG+GE+G+LGR V MK D + Y + + ++HL P + G ++ VK+IGCG YHSM ++ +Y CGLN+YGQLG+G TDN L LVEDL +N GG HS+VLT +G +++FGR DSGQLG + S D F+ P KV
Sbjct: 195 GPEQATAVQIVGGDCHTAVVTLAGRVYMWGCYRDKEGKQWCDAPSAKA--AFKQKQTRPFLIKALD-NIADVKCGNAFNLARTNDGRVYSWGLGEMGQLGRKVDAEMK-------DADGEYKVEMVYKEHLQPKLVML-----GKDQLPVVKSIGCGSYHSMFALSSNGYLYTCGLNNYGQLGIGSTDNCSELQLVEDLSFKNVAFVDGGEHHSVVLTNDGDVYTFGRADSGQLGMLDTCSTGD---FKDRPQKV 431
BLAST of mRNA_L-elsbetiae_contig10117.167.1 vs. uniprot
Match: A0A8K1FPQ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FPQ1_PYTOL) HSP 1 Score: 187 bits (474), Expect = 2.620e-52 Identity = 111/243 (45.68%), Postives = 141/243 (58.02%), Query Frame = 1
Query: 49 GDCQMIALDISGKVYGWGCYKDKEGKQWFQPPSGSSSKACKGASKSPVLISGLPSNVVDIKCGASFCVALAAKGDVLSWGIGEIGELGRDV-CSMKAPAVPGSDDEPPYDFDGILRDHLTPGGMYREAADGGGARMENVKAIGCGEYHSMVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVEDLGGRNTMAAAGGAQHSLVLTTEG-LFSFGRNDSGQLGCTASLSKDDWGAFEKNPMKV 771
GD + ++G+VY WG YKDKEGKQW + SS K P L+ GL SNVVDI+CGASF + G V SWG+GE+G+LGR V MK +D+ Y+ D + R+HLTPG + G + VK IGCG YH +V A+ +Y CGLN+YGQLG+G T+N L LVEDL N GG HS+V+T G ++SFGR DSGQLG L + G F+ P KV
Sbjct: 211 GDSHTAVVTVTGQVYTWGAYKDKEGKQWCDSIAPKSS--FKNKQNHPFLVKGL-SNVVDIRCGASFNIVRTGNGQVYSWGLGEMGQLGRKVNAQMK-------NDKDEYEVDMVFREHLTPGRVTL-----GTDELPPVKDIGCGSYHMLVTLAANGYLYTCGLNNYGQLGIGTTENHDVLQLVEDLTSTNVAYVDGGTHHSVVMTNNGEVYSFGRADSGQLGM---LDECQTGDFKDRPQKV 435
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 432.6 |
Seed ortholog evalue | 1.3e-118 |
Seed eggNOG ortholog | 2880.D8LKE8 |
Preferred name | RCC1 |
KEGG ko | ko:K11493 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000054,GO:0000082,GO:0000226,GO:0000228,GO:0000278,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0005085,GO:0005087,GO:0005088,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005737,GO:0005819,GO:0005856,GO:0006403,GO:0006405,GO:0006406,GO:0006407,GO:0006606,GO:0006607,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007088,GO:0007096,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007346,GO:0007399,GO:0007417,GO:0008104,GO:0008150,GO:0008152,GO:0008536,GO:0009790,GO:0009792,GO:0009987,GO:0010389,GO:0010467,GO:0010564,GO:0010948,GO:0010972,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0015931,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0016973,GO:0017016,GO:0017038,GO:0019899,GO:0022008,GO:0022402,GO:0022607,GO:0022613,GO:0023052,GO:0030154,GO:0031090,GO:0031224,GO:0031267,GO:0031291,GO:0031490,GO:0031491,GO:0031492,GO:0031503,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032886,GO:0032887,GO:0032888,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033157,GO:0033365,GO:0033750,GO:0034504,GO:0034613,GO:0035556,GO:0042254,GO:0042393,GO:0042886,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044087,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0044877,GO:0045184,GO:0045595,GO:0045786,GO:0045930,GO:0046822,GO:0046824,GO:0046825,GO:0046827,GO:0046907,GO:0046982,GO:0046983,GO:0048518,GO:0048519,GO:0048523,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050657,GO:0050658,GO:0050767,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051028,GO:0051029,GO:0051049,GO:0051050,GO:0051128,GO:0051168,GO:0051169,GO:0051170,GO:0051179,GO:0051222,GO:0051223,GO:0051225,GO:0051233,GO:0051234,GO:0051236,GO:0051239,GO:0051259,GO:0051262,GO:0051290,GO:0051291,GO:0051493,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051960,GO:0051983,GO:0060236,GO:0060284,GO:0060341,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070201,GO:0070507,GO:0070727,GO:0070925,GO:0071166,GO:0071426,GO:0071427,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072686,GO:0090087,GO:0090169,GO:0090224,GO:0090316,GO:0097064,GO:0097159,GO:0098772,GO:1901363,GO:1901673,GO:1901681,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902115,GO:1902749,GO:1902750,GO:1902850,GO:1903047,GO:1903827,GO:1903829,GO:1904951,GO:1990023,GO:2000026 |
EggNOG free text desc. | guanyl-nucleotide exchange factor activity |
EggNOG OGs | COG5184@1,KOG1426@2759 |
COG Functional cat. | DZ |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko03019,ko03036 |
Exons | 6 |
Model size | 789 |
Cds size | 789 |
Stop | 1 |
Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815243.364247-CDS-L-elsbetiae_contig10117:98..215 | 1622815243.364247-CDS-L-elsbetiae_contig10117:98..215 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10117 99..215 + |
1691682791.8935094-CDS-L-elsbetiae_contig10117:98..215 | 1691682791.8935094-CDS-L-elsbetiae_contig10117:98..215 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10117 99..215 + |
1622815243.3747206-CDS-L-elsbetiae_contig10117:2174..2252 | 1622815243.3747206-CDS-L-elsbetiae_contig10117:2174..2252 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10117 2175..2252 + |
1691682791.9052575-CDS-L-elsbetiae_contig10117:2174..2252 | 1691682791.9052575-CDS-L-elsbetiae_contig10117:2174..2252 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10117 2175..2252 + |
1622815243.3880277-CDS-L-elsbetiae_contig10117:3020..3092 | 1622815243.3880277-CDS-L-elsbetiae_contig10117:3020..3092 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10117 3021..3092 + |
1691682791.913723-CDS-L-elsbetiae_contig10117:3020..3092 | 1691682791.913723-CDS-L-elsbetiae_contig10117:3020..3092 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10117 3021..3092 + |
1622815243.399883-CDS-L-elsbetiae_contig10117:3900..4098 | 1622815243.399883-CDS-L-elsbetiae_contig10117:3900..4098 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10117 3901..4098 + |
1691682791.9245884-CDS-L-elsbetiae_contig10117:3900..4098 | 1691682791.9245884-CDS-L-elsbetiae_contig10117:3900..4098 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10117 3901..4098 + |
1622815243.4127505-CDS-L-elsbetiae_contig10117:5125..5269 | 1622815243.4127505-CDS-L-elsbetiae_contig10117:5125..5269 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10117 5126..5269 + |
1691682791.93243-CDS-L-elsbetiae_contig10117:5125..5269 | 1691682791.93243-CDS-L-elsbetiae_contig10117:5125..5269 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10117 5126..5269 + |
1622815243.422869-CDS-L-elsbetiae_contig10117:6448..6628 | 1622815243.422869-CDS-L-elsbetiae_contig10117:6448..6628 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10117 6449..6628 + |
1691682791.9400883-CDS-L-elsbetiae_contig10117:6448..6628 | 1691682791.9400883-CDS-L-elsbetiae_contig10117:6448..6628 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10117 6449..6628 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10117.167.1 >prot_L-elsbetiae_contig10117.167.1 ID=prot_L-elsbetiae_contig10117.167.1|Name=mRNA_L-elsbetiae_contig10117.167.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=263bp
KVKEGLEGATIVALASGDCQMIALDISGKVYGWGCYKDKEGKQWFQPPSG SSSKACKGASKSPVLISGLPSNVVDIKCGASFCVALAAKGDVLSWGIGEI GELGRDVCSMKAPAVPGSDDEPPYDFDGILRDHLTPGGMYREAADGGGAR MENVKAIGCGEYHSMVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVE DLGGRNTMAAAGGAQHSLVLTTEGLFSFGRNDSGQLGCTASLSKDDWGAF EKNPMKVCGVGR* back to topmRNA from alignment at L-elsbetiae_contig10117:99..6628+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig10117.167.1 ID=mRNA_L-elsbetiae_contig10117.167.1|Name=mRNA_L-elsbetiae_contig10117.167.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6530bp|location=Sequence derived from alignment at L-elsbetiae_contig10117:99..6628+ (Laminarionema elsbetiae ELsaHSoW15) AAGGTGAAGGAAGGGCTCGAGGGAGCCACCATCGTCGCGTTGGCGTCCGG
AGACTGCCAGATGATCGCGCTCGACATCTCGGGGAAGGTGTACGGCTGGG
GCTGCTATAAGGACAAGGTGGGGTCGATATTTCGGATGCGATAGATGGGA
CATACATACGGATATACAAGTACCATACAACAGCTATAATATTAGGACGG
ATCGAAGAACCCTACAATTTCAGGTCCTTCGCTTCTTAATGTCCTTGCCT
TCTTATAATGTACACACGCCAGGATCTGTCTGAGCTGTGTTCGCCTTGAG
CGGCCTCGGCGGCGAGCGCATCGTGTCGTGTCGTGGATCACACACACCGT
ACCGTGCATACACTCGCAGACGCTGAAAATGGCGCGTGACCGCACGAAGA
AAGCCTGCGGTACTCCGGATGGATGTCGATGTTGTTTTTTTAGTTAAGTA
CCATACATATGTATGTAGCGCTACTACTGTTGCTGTGCTGCTCGCTCTTT
TGCCAATCAATCTCTCCGCCTCCGTCGCACGATATCTGCATGCTTTGTAA
GTATCATATGCATACATACGGTAGTAGCACTGTTTAGTTGTGCTCGTTTC
CGCCGATCAATCTCTGCGCCTTCGACACGAGCTGCAACAAATAAATACGA
TGCGATAAGAGCAGGCAAGACCCTTTCGGTGCGGACGAGATTGTGCCGTT
CGGCGAGACGCAGAGAAGATAACCTGTGAAGGGACGTCGGCTGGTGTATT
GGGTCCCGTTAGGGGTTGAGTGTGGGGGGTTCGCGGTCAGGAGTGGGTGG
GTGGGGGGAGAGGGACAAGCCCACGGGAGAAGAAGAGACTGCTGTTGCCG
GAGAGGGCACGCCGGCGCGGGCTTTGGTGGTCACACGTCGCTGTTGTGTT
GCTTGTTGCCGATGGCCGATTTCACCCGGAATGTGGTTTTTAATTAATGT
ATATAAATGTCAGCAGTCTACGTCCGGTCTGTGAAAATATTAGGGCTGGG
TACTGGACCAGTACCTACTGGCAGTAAACTGGTTTTGGAGCCGCCAGTAC
GCCAGTACTTTACCCGCTTAGTAGGTGGGCCGCGACGGCACGCATATCTC
TTGTAAGGCCGCCTCCTTATTCAGCGGAAACCCGTCCTCTCGTGCCATTC
ATTTATTTTTCAGTAAGATTATAGATTGAGACGCCAACATTTTACGATCC
TTTTAATTCAATCCTGGCTTGCTGCCTTGCTGTTAGTTCTTTTCCGCCGA
CTCTCTCAGTCACACACTCTCAATACGTGAATGCCGACAGAAAAACGGAA
CATGCGTAGTTTAGATACGTCGTACTCCGGAGTATACACATTTTTTCTCA
GTCAACATTCAAAGAGAGTCGACTCTCTTGGCACCGTTTGTCGGTGAGTC
ACCATAGCCAAAACCAACGTAATTTTTTGCTTCTAGTGAAGCCAAATCGC
GAAACAAAAAACGCCTCCGGGGGCTACCCAAAGTACTGGTAGAGTACTGG
TGTACTGCTGACGCAGCCAGTACAAAAGGTACTGGCGCTGCGCGCCAGTA
CCTAGCCCTAGAAAAGATCGTCCCAGAGGGATCTGTTGTGGGCATACTGA
TGTGTTTTTTTGACTCTTTTCTGTTTTTGTAATCTATTGCTTTATTGTAC
CTACACATGGCAGGCACATTGCACATTAAGTCCCTTCGCCGGCTACTCCC
TCAGGCACGTTTACCTCGCTCAGAGGAGGAGAGCTGCCCTTCATATTTAC
GTCTCCCATGGGCCAGGCTGTGTCGCTCTTGTGTTGCATGCATGCATGCA
GGATTCCGGGGTAGAGAAGAGAAGTCTTGTCGATCCGCGCAGTTTTTATT
TTTTTCTTATTCGCATTCCGATCTCGATCTCGGCATTCCAATCTTGGCGC
CTGCGGGTGCCCCCCCCCCCCCCCCCCACCCCATCCGTCCGTGCCCCGTG
CGCTGAAACCGATGCCTGACGGGGTTGGGTTCCCTTCCCCGCGTCGCGTG
TTTTTCATTGTCTTTTGATGGTCGTGTGTTTCGCGACTGCCTTCCCTTCT
TCCGGTGTGTGACGTCGTGGTGTCAGGAGGGGAAGCAGTGGTTCCAGCCC
CCCTCTGGCTCGAGCTCCAAGGCGTGCAAGGGGGCGTCCAAGAGTCCCGT
GCTGGTGAGGGGCGAGGCAGAAAAGTCTATGCAGGCTGCTGCACCCACGG
CAATAATCCGAAAGTTTTTTTTTTTTCATTTTTTTTCTTGTTGTTGTTCC
CCTGGACACCCTATGGATATAGCGCATGCACCCCCTCAATAGGCAGGTAT
TTCGCCGCTCGCTCGTAGGCAACCTCCCCTCTGTTTTCTTGTGGGCTCAG
ATTGCGCCAGGCCAAGAGCGCCGGAAATTGCAGTACTTTTTCGTACGTAC
TCTATACTGTACATTCGAGGTACAATTTGTACGAATGTATGTATTGTTGT
TTTTTAAATTCTCCATTCGTGCCCCTCGAAGTCGTTCAAAGCTGTAGGCT
TCCTGCAATAAAGCCAAGCCCCCAATTCTCGAAGAGAGCCGTGGGAGCAG
CGGGGGGGGGGGGTATTTATCTAGGAAATAGAGTGAAAAATCCCCCACGG
GGCCACTTTTTCAGAACTGGGGGCCCTGCTGCAGGAAAAGCATATTTATT
GCCTTTCCACCAATGAACGACCGAATGCGTTGGGAAAACACACCGCCAAC
TCTGTTTGTTTCAAAAGCAAGGTATAAGCTGAAATGTAGCGCCGCTCTTC
CTTATTCAATACTTCGAAGTATTTTGCACCCGGACAACGTTGTCTGTTCC
AAAGCAACGCGTAGCAGTTGATGGCACTCTTCCTTCTCTTGCCTTTTCCG
CGCATGTTTCACATGTGCCCCCCACCCCCGCCCCCCCCCCGCCCCCCGCC
CTCTTCCCTGCCGGCGTCTCAGATCTCCGGTCTCCCTTCGAACGTGGTGG
ACATCAAGTGCGGCGCCAGCTTTTGCGTGGCCCTCGCCGCCAAGGTCGGT
TTCACAGGGTACCCTACGCACCTACCCCCCAAAGCAGATTTTGTTCGTGT
ACTTGGCTGTCGCACACAGGCACACAAAACTGTCGGGGTGACGCCGTTCC
ACGCCACGCTATTTACGCCCCCGCTCTTTTGTGTATCTCATCATCAAATT
GTCGCCGCTGGTCGGAGGAAGCAACACTATAATCGTACATACCACCGGCA
AGCAGTACTGGCTGCTGTAGCATGCTGTAGCAGGTTCACCAGCCGAAGGC
AAGAGCCCTGTTGTTGTACCGAAAACTTGTATTCCTCGCCGTCGACTCCG
TACGCATCGTTCGTTTTATCGGTCGTTTTTTCGGTAAACAGCTGTGCTCT
CTCTCCCCGCCCCCCCCCCTAACCCCCCCCCCGCCAGAGCCTCGAGCCTC
GTTGCCTACAGTTGTCGTGCTGTCTTGGCCTTTGCTGTCTTGGTGACCGC
GCGTGGTGGGAGCGTTCTCGGTCACGGGTCGAACATTTATTCGGCGGAAT
AATATTCATACTTCTATTTATTTAGGCCTCGACAGGGCTAAGCCCTCACC
CTAACCCTTCCATGTTCGGCTCCTACCCCCCGCGGTGTACTTGGATCTCT
CTCCCCCCTCTCTTTGCTCTCTTCTCTTCCGGACGCACGTCGGGAGGAGG
AAGCGGTGACATGACCCGAGATCTGAAATTGCAGGATAAAAAGAGTCGAC
CCCCCCCCGAAAACCCATATTTTGTTTTAATGCTGTGCTGTGTATGTATG
GTTGTGCTGGGCTTATAGATATAGACTAAACCATGGCGTGGTGTTGTTTC
AGGGAGACGTTTTGAGCTGGGGCATCGGCGAGATCGGCGAGCTCGGCAGG
GACGTGTGCTCCATGAAGGCGCCGGCGGTGCCGGGCTCCGACGACGAGCC
GCCGTACGACTTCGACGGTATCCTGCGAGACCACCTCACGCCGGGGGGCA
TGTACAGGGAGGCGGCGGATGGGGGCGGCGCGCGGATGGAGAACGTTAAG
GTGTGTGTGTGTGTGTCTGTGTGTCTGTGTGCGTGTGCGTGTGCGTGTGT
GTGCATGACTATACATAAAGTATGCATCTGTACCTGCATCTTTCTTGTGT
CTACATATCTGTATGTTTGGAGGGGGTACTTGTGTTTGAACAACACAAAC
GGAAGTTGTTTATTGTTTTTTCATATTGTCGTGTTACGGACATACATATG
TATGTACCAGTACACGGGTGGTTAAAACACACATCTGAAATTTGACAGAT
TGACCCCCAACTTTGAACTCCCAATCTGCGTCCAACTCCCATGTCGGTCA
CTCGCGGAGGGAGGTTCCGATATAGTTTCTCGGACACAGGCGGGAATGTT
TTGCTTTATCCGTCGGACTGGAAAGGGCAGCCGAAAGGCAGGCAAACCAA
TGCCCAACACTAAACCACATTACATACGTGCAACTGCTTTTCGTGTAAAG
TCAGAGGTATTATAGAAGATAAACTTACACGAAGGTAAGTTACACATCTC
GGGGTGCGGGGTGTTCATATCTGTTGTGTTGACTGCGGCTGCGTGAACGG
GTCGTCGTCAGGGATGGGTGGGTGTTTTTGTCGATGCGATGCGGACGGGA
GAGCTTGGTGGCTCAGAGGATGTCGCGGGTTTTGCCGACAATATATTGTT
GCGAACACTGCTGCGTTTGTACGGCAGCAGTGTTGCTGCACTTCATTCGC
ACCCCTGTTGCACCTCCGGTTGCACCCTGCAAAAAGGTTTTGCCACAACC
ACCGTTATCTGACCCCTCCACTGACACTGACACGCAGGACGATCTCGGAA
TCTGACTGTTCGTGCTCAGCTCAGCTCAGCTCAGCTCCCCACGAAGCCTC
TTCTTAGTACCTCCTTATCCCTTGCTAAGCAACCCGCCGCTCTGCTGACA
GCCGGCCTGACCCCCCCCCTGCGGTTCTTGTGATTACGCCTCCGCCCCCG
CCCCCGCCCCCGCCCCCGCCCTCGCCCCCGCCTCTGTCCCCGCCCCTTGC
CCCTTCGAAACGTGGTTCACGAAACAGGCAATCGGATGCGGAGAGTACCA
CTCGATGGTGGTGACGAGGGCGGACGCCGACGTGTACGCCTGCGGGCTTA
ACTCGTACGGGCAGCTTGGGCTGGGCGACACGGACAACCGGAAGCGCCTT
GCGCTGGTGGAAGACCTCGGCGTGAGTCTCGAAGGGGTTAGATGTACTGT
TAAAAAATGCCTGGTGTTGGTGTGCGATAGATACTACGTGACTACGGCTG
TGTGAGTGCTGTAGCTTACGCACGGCAAGTATAAGGTAAACATATAATGA
TAGAAGTATGTACATAGCGCAGTGCAACGGTTGTCGGCCCGAAATACTGT
TTTGAGTGCTGCCGCGCACCTCACGTCAAGAAAAGTACCGGTAAGAGAAT
AGCTTGTAGCGAAACGATGAACGCTCAATTTTTATTCCTGTTTGGCTGGC
TTTTAAAAAAAACGGTGAGCGGTCAATTTTTATTCCTGTTTGGCTGTCAT
TTGTAAAAGCCCCGTTTTTGGTCGCTGCCCTCCTCACAGCTTATGTAATG
CGCTGCCTTCTCCGCGGCCGAGACGGGGTTCCCGCTCCGTCATGAGAGTT
CACGAAGAGGCATACAGCATTAGTAGAACGAAAGCGCGTCGCGACGTAGG
CAGTCCGAGCATACCACGACACTGTTGTTGCCAGGCGTGCTGCTGCCGTT
CAGCTCTCTGGAGGGAACCAGCGCGCTTTTATTTGAGTTTGAAGAGCTTG
AGCTACATACACATGTATCACCGCTTCGGTTACATACTTCTGTGACTGAC
CGCCATATATATATATAAATAAAGTATAAATATATAGAAGTATGTATATA
TATATATTTTCCCTCCCATTATTGGCTTGTTCATCGTCTGCCGAACTGGC
CCCCTCCACTACATGTACGACTAGCTAGACGACCCAGCCGGGGTAACATA
TATATCTCTAGATCGAAACACATCTCTTTCTACAATGCAAGTCTTAAAAA
AAAACGGTTTTGTATTCATCGCCCTTCTTTCACCAGTAAAAATGTCATTT
TGCCCTTCGCTCGGTCGCTTCTCCCTCCTCAGGCAGGCACCCCCCCCCAA
ATAAAAATAAAATAAAATAATTCGTGCAGTACGTACAACGAGTGCCCGCC
CCCACCACCGAGCTGCCGCTACCTCGTCGGCCCCAATGAGGCGTTTTTTT
CCCGTTGTTGTTGTTGTTGTTGTCGTTGTTGTTGTTGTTGTCGTCGTCGT
TTTGTCGTCTGATATGAATGTCGCCCGGTGCGAATTGTTGCCCGGTGTGA
GCGTTGTTTGACGTTTGGGTGTTGTTGCCTGGCGCGGAACGTTGCTGCAG
GGGCGGAACACGATGGCGGCGGCGGGCGGGGCCCAGCACTCCCTGGTGCT
CACCACCGAGGGCCTGTTTTCCTTCGGCAGGAACGACTCCGGTCAGCTCG
GCTGCACCGCGTCGCTCAGCAAGGACGACTGGGGGGCCTTCGAGAAGAAC
CCCATGAAGGTATGTGGTGTAGGTAGGTAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig10117:99..6628+ >mRNA_L-elsbetiae_contig10117.167.1 ID=mRNA_L-elsbetiae_contig10117.167.1|Name=mRNA_L-elsbetiae_contig10117.167.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1578bp|location=Sequence derived from alignment at L-elsbetiae_contig10117:99..6628+ (Laminarionema elsbetiae ELsaHSoW15) AAGGTGAAGGAAGGGCTCGAGGGAGCCACCATCGTCGCGTTGGCGTCCGG AGACTGCCAGATGATCGCGCTCGACATCTCGGGGAAGGTGTACGGCTGGG GCTGCTATAAGGACAAGAAGGTGAAGGAAGGGCTCGAGGGAGCCACCATC GTCGCGTTGGCGTCCGGAGACTGCCAGATGATCGCGCTCGACATCTCGGG GAAGGTGTACGGCTGGGGCTGCTATAAGGACAAGGAGGGGAAGCAGTGGT TCCAGCCCCCCTCTGGCTCGAGCTCCAAGGCGTGCAAGGGGGCGTCCAAG AGTCCCGTGCTGGAGGGGAAGCAGTGGTTCCAGCCCCCCTCTGGCTCGAG CTCCAAGGCGTGCAAGGGGGCGTCCAAGAGTCCCGTGCTGATCTCCGGTC TCCCTTCGAACGTGGTGGACATCAAGTGCGGCGCCAGCTTTTGCGTGGCC CTCGCCGCCAAGATCTCCGGTCTCCCTTCGAACGTGGTGGACATCAAGTG CGGCGCCAGCTTTTGCGTGGCCCTCGCCGCCAAGGGAGACGTTTTGAGCT GGGGCATCGGCGAGATCGGCGAGCTCGGCAGGGACGTGTGCTCCATGAAG GCGCCGGCGGTGCCGGGCTCCGACGACGAGCCGCCGTACGACTTCGACGG TATCCTGCGAGACCACCTCACGCCGGGGGGCATGTACAGGGAGGCGGCGG ATGGGGGCGGCGCGCGGATGGAGAACGTTAAGGGAGACGTTTTGAGCTGG GGCATCGGCGAGATCGGCGAGCTCGGCAGGGACGTGTGCTCCATGAAGGC GCCGGCGGTGCCGGGCTCCGACGACGAGCCGCCGTACGACTTCGACGGTA TCCTGCGAGACCACCTCACGCCGGGGGGCATGTACAGGGAGGCGGCGGAT GGGGGCGGCGCGCGGATGGAGAACGTTAAGGCAATCGGATGCGGAGAGTA CCACTCGATGGTGGTGACGAGGGCGGACGCCGACGTGTACGCCTGCGGGC TTAACTCGTACGGGCAGCTTGGGCTGGGCGACACGGACAACCGGAAGCGC CTTGCGCTGGTGGAAGACCTCGGCGCAATCGGATGCGGAGAGTACCACTC GATGGTGGTGACGAGGGCGGACGCCGACGTGTACGCCTGCGGGCTTAACT CGTACGGGCAGCTTGGGCTGGGCGACACGGACAACCGGAAGCGCCTTGCG CTGGTGGAAGACCTCGGCGGGCGGAACACGATGGCGGCGGCGGGCGGGGC CCAGCACTCCCTGGTGCTCACCACCGAGGGCCTGTTTTCCTTCGGCAGGA ACGACTCCGGTCAGCTCGGCTGCACCGCGTCGCTCAGCAAGGACGACTGG GGGGCCTTCGAGAAGAACCCCATGAAGGTATGTGGTGTAGGTAGGTAGGG GCGGAACACGATGGCGGCGGCGGGCGGGGCCCAGCACTCCCTGGTGCTCA CCACCGAGGGCCTGTTTTCCTTCGGCAGGAACGACTCCGGTCAGCTCGGC TGCACCGCGTCGCTCAGCAAGGACGACTGGGGGGCCTTCGAGAAGAACCC CATGAAGGTATGTGGTGTAGGTAGGTAG back to top
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