mRNA_L-elsbetiae_contig10100.156.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10100.156.1 vs. uniprot
Match: D8LCV7_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV7_ECTSI) HSP 1 Score: 201 bits (512), Expect = 5.950e-64 Identity = 130/154 (84.42%), Postives = 142/154 (92.21%), Query Frame = 1 Query: 1 MERRPIDYACGQGELARRRAALDSLRQEVDAARXXXXXXXXXXXXXXXXXXXXXXXSSRLDQQRQTMREHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAQKIREKSKTFNLYVIIVLLSVILAVLVFSGL 462 MERRP+D+A GQGELARRRAALD+L +EV A R XXXXXXXXXXXXXXXXX S RL+QQR+TM+EHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGL TEARHA+KIREKSKTFNLYVII++LS+ILA+LVFSGL Sbjct: 1 MERRPVDFAVGQGELARRRAALDTLHREVGAVRGSMGGXXXXXXXXXXXXXXXXXMS-RLEQQRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLLTEARHAEKIREKSKTFNLYVIILVLSIILAILVFSGL 153
BLAST of mRNA_L-elsbetiae_contig10100.156.1 vs. uniprot
Match: A0A6H5KPB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB3_9PHAE) HSP 1 Score: 197 bits (502), Expect = 9.000e-62 Identity = 125/154 (81.17%), Postives = 139/154 (90.26%), Query Frame = 1 Query: 1 MERRPIDYACGQGELARRRAALDSLRQEVDAARXXXXXXXXXXXXXXXXXXXXXXXSSRLDQQRQTMREHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAQKIREKSKTFNLYVIIVLLSVILAVLVFSGL 462 MERRP+D+A G GELARRRA L++LR+EV A R XXXXXXXXXXXXXXX S RL+QQR+TM+EHDRMLADLGRGVGRLKTQS MINEETSLHVRLLDDMEGDAERASSGL+TEARHA+KIREKSKTFNLYVII++LS+ILA+LVFSGL Sbjct: 48 MERRPVDFAVGHGELARRRAELETLRREVGAVRGPMGGGQXXXXXXXXXXXXXXXMS-RLEQQRETMKEHDRMLADLGRGVGRLKTQSAMINEETSLHVRLLDDMEGDAERASSGLRTEARHAEKIREKSKTFNLYVIILVLSIILAILVFSGL 200
BLAST of mRNA_L-elsbetiae_contig10100.156.1 vs. uniprot
Match: A0A835ZEW5_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEW5_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.610e-25 Identity = 68/184 (36.96%), Postives = 100/184 (54.35%), Query Frame = 1 Query: 4 ERRPIDYACGQGELARRRAALDSLRQEVDAARXXXXXXXXXXXXXXXXXXXXXXXSSRLDQQRQTMREHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAQK-------------------------------IREKSKTFNLYVIIVLLSVILAVLVFSGL 462 E RP+D+ + ++ RRR+ L+ L Q++ + S RL +QR+ M+EHDR++ +LG+GVGRL SV+IN+E +LHVRLLDDM+ D ERA++ L E RHAQK +R+KSKTF LYV I++L+++L +L+ SGL Sbjct: 38 ETRPMDHGLTRVKVLRRRSQLEGLEQQLQSV--------GGGGGAGMRGSGSGGISGRLAKQREAMQEHDRIVEELGKGVGRLHQTSVVINDEANLHVRLLDDMDEDIERANASLMQETRHAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRQKSKTFWLYVTIIVLTIVLVLLIVSGL 213
BLAST of mRNA_L-elsbetiae_contig10100.156.1 vs. uniprot
Match: A0A4D9D1R7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1R7_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.270e-19 Identity = 54/160 (33.75%), Postives = 84/160 (52.50%), Query Frame = 1 Query: 1 MERRPIDYACGQGELARRRAALDSLRQEVD-------AARXXXXXXXXXXXXXXXXXXXXXXXSSRLDQQRQTMREHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAQKIREKSKTFNLYVIIVLLSVILAVLVFSG 459 ME+ P + Q ++ RRR + LR ++ + Q+R+ + E D +L DLG+GV RLK Q ++I +ET +H +LL+D++GD E A+S L+ EARHAQ+IRE+S LY+ I +L +IL +L+ G Sbjct: 58 MEQNPGQFGISQSDVVRRRELVKGLRHQLSLLGTSSHGTNGLATGTTRDGSAASGGGGVPGGLRTLAQQRREIIHEQDELLEDLGKGVDRLKMQGLVIRDETGIHHKLLEDIDGDVEAAASSLRMEARHAQRIREQSTVCRLYICIAILLIILVLLLVIG 217
BLAST of mRNA_L-elsbetiae_contig10100.156.1 vs. uniprot
Match: A0A7S1XYZ3_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYZ3_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.760e-18 Identity = 53/153 (34.64%), Postives = 85/153 (55.56%), Query Frame = 1 Query: 1 MERRPIDYACGQGELARRRAALDSLRQEVDAARXXXXXXXXXXXXXXXXXXXXXXXSSRLDQQRQTMREHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAQKIREKSKTFNLYVIIVLLSVILAVLVFSG 459 M ++P D+ E+ARR++ + S ++++ R +Q+ M D M+AD+G+GV RL + I +ET LHVRLLD+M+ D +RA++GL+ EARHA++IR KS+ LY+ I +LS +L +L+ G Sbjct: 111 MAQKPADFFMSSSEVARRKSLIASYKEQLHNLRMGRDPGAAGADQGQQMK----------QRQKDIMALQDDMIADIGKGVDRLGNTANKIKDETQLHVRLLDEMDVDVDRATAGLRAEARHAEQIRLKSQNCYLYICIAILSCVLLLLIVLG 253
BLAST of mRNA_L-elsbetiae_contig10100.156.1 vs. uniprot
Match: A0A6G0WAN7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAN7_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 3.980e-13 Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 187 QRQTMREHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAQKIREKSKTFNLYVIIVLLSVIL 438 Q Q M++ D L +G+GV LK S+ + ET LH RLLDD+ D +RA+SGL++E A+ + +KS F LY+ I++LSVIL Sbjct: 118 QNQIMQDQDEQLNIIGQGVSNLKQYSLAVKNETDLHARLLDDINIDVDRATSGLESEGDRAEYVAKKSSNFRLYMAILVLSVIL 201
BLAST of mRNA_L-elsbetiae_contig10100.156.1 vs. uniprot
Match: A0A024G688_9STRA (t-SNARE coiled-coil homology domain-containing protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024G688_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 9.830e-13 Identity = 40/84 (47.62%), Postives = 50/84 (59.52%), Query Frame = 1 Query: 169 SSRLDQQRQTMREHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAQKIREKSKTFNLYVIIV 420 S L Q+Q MR+ D L +G+GV LK S+ + +ET LH+RLLDDM+GD A GL TE A KI +S LYV IV Sbjct: 107 SQLLGLQKQIMRDQDDQLDIIGKGVANLKNFSMAVKDETDLHIRLLDDMDGDVLHAKDGLNTEGARAAKIARQSGNIKLYVTIV 190
BLAST of mRNA_L-elsbetiae_contig10100.156.1 vs. uniprot
Match: A0A485KLB7_9STRA (Aste57867_8788 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLB7_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.520e-12 Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 187 QRQTMREHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAQKIREKSKTFNLYVIIVLLSVIL 438 Q Q M + D L +G+GV LK S+ + +ET LHVRLLDD+ D E+A++GL++E A + ++S F LY+ IV+LSVIL Sbjct: 118 QNQMMLDQDEQLNMIGQGVANLKQYSLAVKDETDLHVRLLDDINVDVEKATTGLESEGDRAAILAKRSSNFRLYLAIVVLSVIL 201
BLAST of mRNA_L-elsbetiae_contig10100.156.1 vs. uniprot
Match: W4FTN5_9STRA (t-SNARE coiled-coil homology domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FTN5_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 3.060e-12 Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 187 QRQTMREHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAQKIREKSKTFNLYVIIVLLSVIL 438 Q Q M + D L+ +G+GV LK S+ + ET LHVRLLDD+ D +RA++GL+ E AQ + +KS F LY+ IV+L+ IL Sbjct: 142 QNQIMLDQDDQLSLIGQGVSNLKQYSLSVKNETDLHVRLLDDINVDVDRATTGLEAEGDRAQILAKKSSNFRLYLAIVVLTAIL 225
BLAST of mRNA_L-elsbetiae_contig10100.156.1 vs. uniprot
Match: A0A6A5ALK1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ALK1_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.660e-11 Identity = 36/76 (47.37%), Postives = 51/76 (67.11%), Query Frame = 1 Query: 211 DRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLQTEARHAQKIREKSKTFNLYVIIVLLSVIL 438 D L+ +G+GV LK S+ + ET LHVRLLDD+ D +RA++GL+ E AQ + +KS F LY+ IV+L+ IL Sbjct: 28 DDQLSLIGQGVSNLKQYSLSVKNETDLHVRLLDDINVDVDRATTGLEAEGDRAQILAKKSSNFRLYLAIVVLTAIL 103 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10100.156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10100.156.1 >prot_L-elsbetiae_contig10100.156.1 ID=prot_L-elsbetiae_contig10100.156.1|Name=mRNA_L-elsbetiae_contig10100.156.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=155bp MERRPIDYACGQGELARRRAALDSLRQEVDAARRAAPPPGGGSAGGGAGGback to top mRNA from alignment at L-elsbetiae_contig10100:486..4742- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10100.156.1 ID=mRNA_L-elsbetiae_contig10100.156.1|Name=mRNA_L-elsbetiae_contig10100.156.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4257bp|location=Sequence derived from alignment at L-elsbetiae_contig10100:486..4742- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10100:486..4742- >mRNA_L-elsbetiae_contig10100.156.1 ID=mRNA_L-elsbetiae_contig10100.156.1|Name=mRNA_L-elsbetiae_contig10100.156.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=930bp|location=Sequence derived from alignment at L-elsbetiae_contig10100:486..4742- (Laminarionema elsbetiae ELsaHSoW15)back to top |