mRNA_L-elsbetiae_contig101.147.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig101.147.1
Unique NamemRNA_L-elsbetiae_contig101.147.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig101.147.1 vs. uniprot
Match: D8LP70_ECTSI (Similar to aspartate beta-hydroxylase isoform a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP70_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 2.240e-59
Identity = 91/134 (67.91%), Postives = 104/134 (77.61%), Query Frame = 2
Query:  182 GRIDVNGDGNALA--FAETRKLLGQDPDYARTQDFNKYAQFNFMATFFTILYPGASIRPHFGPTNYKYRLHICLDVDGVGGIVTAYDTRFWKKGEVFILDDSYLHAGFYEGTRPRVILMVDIAKRGLNQSHVDH 577
            GRI VN +       F +TRK+L    DY RTQ FN YA    MAT FT+LYPGASIRPHFGPTNYKYR+H+C+D+DGVGGIVTAY TR W+ G +FILDDSYLHAGFY+GTRPRVILMVDIAK GL   H++H
Sbjct:   61 GRIIVNREEQRFGNHFIDTRKILEASADYMRTQMFNNYANTYVMATSFTVLYPGASIRPHFGPTNYKYRIHLCIDIDGVGGIVTAYGTRCWRVGHIFILDDSYLHAGFYDGTRPRVILMVDIAKPGLTPEHMEH 194          
BLAST of mRNA_L-elsbetiae_contig101.147.1 vs. uniprot
Match: UPI001C902FA7 (aspartyl/asparaginyl beta-hydroxylase-like isoform X5 n=3 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C902FA7)

HSP 1 Score: 73.6 bits (179), Expect = 9.950e-12
Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 2
Query:  317 FTILYPGASIRPHFGPTNYKYRLHICLDVDGVGGIVTAYDTRFWKKGEVFILDDSYLHAGFYEGTRPRVILMVDI 541
            F++L PG+++ PH GPTN + RLH+ + V    GI  A + R W++G+V I+DDS+ H  + EGT  R +L+VDI
Sbjct:  745 FSMLAPGSTVWPHTGPTNCRLRLHLGIKVPPGTGIRVAGEKRTWEEGKVLIIDDSFEHDVWNEGTESRFVLIVDI 819          
BLAST of mRNA_L-elsbetiae_contig101.147.1 vs. uniprot
Match: A0A4C1XJ61_EUMVA (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1XJ61_EUMVA)

HSP 1 Score: 73.2 bits (178), Expect = 1.100e-11
Identity = 30/75 (40.00%), Postives = 50/75 (66.67%), Query Frame = 2
Query:  317 FTILYPGASIRPHFGPTNYKYRLHICLDVDGVGGIVTAYDTRFWKKGEVFILDDSYLHAGFYEGTRPRVILMVDI 541
            F+++ PG  +RPH GPTN + R+H+ L       +    +TR W++G+V + DDS+ H  ++ GTRPR++L+VD+
Sbjct:  353 FSLIEPGTHVRPHVGPTNCRLRMHLGLSNTTGTYLRVDRETRQWREGKVLLFDDSFEHEVWHNGTRPRLVLIVDV 427          
BLAST of mRNA_L-elsbetiae_contig101.147.1 vs. uniprot
Match: UPI001C928285 (cell surface glycoprotein 1-like isoform X1 n=11 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C928285)

HSP 1 Score: 73.2 bits (178), Expect = 1.440e-11
Identity = 34/75 (45.33%), Postives = 50/75 (66.67%), Query Frame = 2
Query:  317 FTILYPGASIRPHFGPTNYKYRLHICLDVDGVGGIVTAYDTRFWKKGEVFILDDSYLHAGFYEGTRPRVILMVDI 541
            F++L PG ++ PH GPTN + RLH+ + V    GI  A + R W++G+V I+DDS+ H  + EGT  R +L+VDI
Sbjct: 1188 FSMLAPGTTVWPHTGPTNCRLRLHLGIKVPPGTGIRVAGEKRTWEEGKVLIIDDSFEHDVWNEGTESRFVLIVDI 1262          
BLAST of mRNA_L-elsbetiae_contig101.147.1 vs. uniprot
Match: UPI001E1D4067 (aspartyl/asparaginyl beta-hydroxylase-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4067)

HSP 1 Score: 71.2 bits (173), Expect = 5.760e-11
Identity = 30/75 (40.00%), Postives = 49/75 (65.33%), Query Frame = 2
Query:  317 FTILYPGASIRPHFGPTNYKYRLHICLDVDGVGGIVTAYDTRFWKKGEVFILDDSYLHAGFYEGTRPRVILMVDI 541
            F++++PG  + PH GPTN + R H+ L +     I    +TR WK+G+  I+DDS+ H  +++GT  R+IL+VD+
Sbjct:  514 FSVMHPGVHVWPHTGPTNCRLRAHLGLKIPDGPRIRVGNETRTWKEGKFIIIDDSFEHEVWHDGTEVRLILIVDL 588          
BLAST of mRNA_L-elsbetiae_contig101.147.1 vs. uniprot
Match: UPI001B812E85 (aspartyl/asparaginyl beta-hydroxylase domain-containing protein n=1 Tax=Actinospica sp. MGRD01-02 TaxID=2828514 RepID=UPI001B812E85)

HSP 1 Score: 65.5 bits (158), Expect = 2.110e-9
Identity = 40/141 (28.37%), Postives = 63/141 (44.68%), Query Frame = 2
Query:  140 SSWKTQRSSGTETCGRIDVNGDGNALAFAETRKLLGQDPDYART-------QDFNKYAQFNFMATFFTILYPGASIRPHFGPTNYKYRLHICLDVDGVGGIVTAYDTRFWKKGEVFILDDSYLHAGFYEGTRPRVILMVDI 541
            S+W   R + ++    +    D  AL       L+ +  + ART             A    + + F++L PGA I+PH    N+   LH  +DV    GI  A + R W++G   + D S+ H  +  GT PR  L+VD+
Sbjct:   83 SAWAVDRDAFSDYRHYLSTQRDWQALYLYRNAGLVEESAETARTAFSVLRDHVVQTGAICPLLESHFSVLLPGARIKPHCDLWNFSINLHFAIDVPEGCGISVAGEARRWEEGRCLLFDYSFEHEAWNAGTAPRTCLLVDL 223          
BLAST of mRNA_L-elsbetiae_contig101.147.1 vs. uniprot
Match: UPI001CF136B6 (LOW QUALITY PROTEIN: aspartyl/asparaginyl beta-hydroxylase-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF136B6)

HSP 1 Score: 65.9 bits (159), Expect = 3.950e-9
Identity = 28/74 (37.84%), Postives = 47/74 (63.51%), Query Frame = 2
Query:  317 FTILYPGASIRPHFGPTNYKYRLHICLDVDGVGGIVTAYDTRFWKKGEVFILDDSYLHAGFYEGTRPRVILMVD 538
            ++++ PG  + PH GPTN + RLH+ L +     I   ++TR WK+G+  I+DDS+ H  ++ G+  R+I +VD
Sbjct:  452 YSVMLPGTHVWPHTGPTNCRLRLHLGLVIPKNVAIRVGHETRTWKEGKAIIIDDSFDHEVWHNGSTFRLIFIVD 525          
BLAST of mRNA_L-elsbetiae_contig101.147.1 vs. uniprot
Match: UPI00077A67E9 (aspartyl/asparaginyl beta-hydroxylase-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A67E9)

HSP 1 Score: 65.9 bits (159), Expect = 4.290e-9
Identity = 28/74 (37.84%), Postives = 47/74 (63.51%), Query Frame = 2
Query:  317 FTILYPGASIRPHFGPTNYKYRLHICLDVDGVGGIVTAYDTRFWKKGEVFILDDSYLHAGFYEGTRPRVILMVD 538
            ++++ PG  + PH GPTN + RLH+ L +     I   ++TR WK+G+  I+DDS+ H  ++ G+  R+I +VD
Sbjct:  660 YSVMLPGTHVWPHTGPTNCRLRLHLGLVIPKNVAIRVGHETRTWKEGKAIIIDDSFDHEVWHNGSTFRLIFIVD 733          
BLAST of mRNA_L-elsbetiae_contig101.147.1 vs. uniprot
Match: A0A545U925_9GAMM (Aspartyl/asparaginyl beta-hydroxylase domain-containing protein n=1 Tax=Aliikangiella coralliicola TaxID=2592383 RepID=A0A545U925_9GAMM)

HSP 1 Score: 64.3 bits (155), Expect = 5.290e-9
Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 2
Query:  317 FTILYPGASIRPHFGPTNYKYRLHICLDVDGVGGIVTAYDTRFWKKGEVFILDDSYLHAGFYEGTRPRVILMVDI 541
            F+IL PGASI+PH    N+   LH+ +D+     I  A++TR W++G+  + D SYLH       + R+ L++DI
Sbjct:  146 FSILAPGASIKPHCDLCNFAINLHLAVDIPENCSITVAHETRQWEEGKCLLFDYSYLHEASNGSGQKRICLLMDI 220          
BLAST of mRNA_L-elsbetiae_contig101.147.1 vs. uniprot
Match: A0A2B4SH42_STYPI (Aspartyl/asparaginyl beta-hydroxylase n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SH42_STYPI)

HSP 1 Score: 65.1 bits (157), Expect = 6.900e-9
Identity = 28/74 (37.84%), Postives = 47/74 (63.51%), Query Frame = 2
Query:  317 FTILYPGASIRPHFGPTNYKYRLHICLDVDGVGGIVTAYDTRFWKKGEVFILDDSYLHAGFYEGTRPRVILMVD 538
            ++++ PG  + PH GPTN + RLH+ L +     I    +TR W++G+  I+DDS+ H  ++ G+  R+IL+VD
Sbjct:  378 YSVMLPGTHVWPHTGPTNCRLRLHLGLVIPNNVAIRVGRETRTWEEGKALIIDDSFDHEVWHNGSTFRLILIVD 451          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig101.147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP70_ECTSI2.240e-5967.91Similar to aspartate beta-hydroxylase isoform a n=... [more]
UPI001C902FA79.950e-1245.33aspartyl/asparaginyl beta-hydroxylase-like isoform... [more]
A0A4C1XJ61_EUMVA1.100e-1140.00Asp_Arg_Hydrox domain-containing protein n=1 Tax=E... [more]
UPI001C9282851.440e-1145.33cell surface glycoprotein 1-like isoform X1 n=11 T... [more]
UPI001E1D40675.760e-1140.00aspartyl/asparaginyl beta-hydroxylase-like isoform... [more]
UPI001B812E852.110e-928.37aspartyl/asparaginyl beta-hydroxylase domain-conta... [more]
UPI001CF136B63.950e-937.84LOW QUALITY PROTEIN: aspartyl/asparaginyl beta-hyd... [more]
UPI00077A67E94.290e-937.84aspartyl/asparaginyl beta-hydroxylase-like n=1 Tax... [more]
A0A545U925_9GAMM5.290e-938.67Aspartyl/asparaginyl beta-hydroxylase domain-conta... [more]
A0A2B4SH42_STYPI6.900e-937.84Aspartyl/asparaginyl beta-hydroxylase n=2 Tax=Styl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig101contigL-elsbetiae_contig101:36508..37111 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score167.5
Seed ortholog evalue3.1e-39
Seed eggNOG ortholog2880.D8LP70
Preferred nameASPHD2
KEGG koko:K00476
Hectar predicted targeting categoryother localisation
EggNOG free text desc.peptide-aspartate beta-dioxygenase activity
EggNOG OGsCOG3555@1,KOG3696@2759
EC1.14.11.16
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Ec32 ortholog descriptionsimilar to aspartate beta-hydroxylase isoform a
Ec32 orthologEc-06_006420.1
Exons1
Model size604
Cds size300
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815241.7028418-CDS-L-elsbetiae_contig101:36507..368071622815241.7028418-CDS-L-elsbetiae_contig101:36507..36807Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig101 36508..36807 -
1691682790.8318195-CDS-L-elsbetiae_contig101:36507..368071691682790.8318195-CDS-L-elsbetiae_contig101:36507..36807Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig101 36508..36807 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815241.7153072-UTR-L-elsbetiae_contig101:36807..371111622815241.7153072-UTR-L-elsbetiae_contig101:36807..37111Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig101 36808..37111 -
1691682790.8425179-UTR-L-elsbetiae_contig101:36807..371111691682790.8425179-UTR-L-elsbetiae_contig101:36807..37111Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig101 36808..37111 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig101.147.1prot_L-elsbetiae_contig101.147.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig101 36508..36807 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig101.147.1

>prot_L-elsbetiae_contig101.147.1 ID=prot_L-elsbetiae_contig101.147.1|Name=mRNA_L-elsbetiae_contig101.147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=100bp
MATFFTILYPGASIRPHFGPTNYKYRLHICLDVDGVGGIVTAYDTRFWKK
GEVFILDDSYLHAGFYEGTRPRVILMVDIAKRGLNQSHVDHFLQQSFRH*
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mRNA from alignment at L-elsbetiae_contig101:36508..37111-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig101.147.1 ID=mRNA_L-elsbetiae_contig101.147.1|Name=mRNA_L-elsbetiae_contig101.147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=604bp|location=Sequence derived from alignment at L-elsbetiae_contig101:36508..37111- (Laminarionema elsbetiae ELsaHSoW15)
CTTCCACCGATATTCGGTGGCGGCCTAGAGATGAAAGGACCTTTCCCTTC AACAAAAGCATGTCGATTGGAAGATTTAGAATCTCTCTTGAAATCTAATA TGGTTACATTTATGACTGACTTCAACGATCACAGAGATCAGTTCGTGGAA AACCCAGAGGAGCTCGGGTACGGAAACGTGTGGTAGGATCGATGTAAACG GTGACGGGAATGCTTTGGCATTCGCGGAGACGAGAAAGCTTCTAGGCCAA GACCCCGACTATGCTCGAACACAAGATTTCAACAAATACGCTCAATTCAA TTTCATGGCAACATTTTTCACCATCCTGTATCCAGGGGCATCTATCCGGC CACACTTCGGGCCTACCAATTACAAGTATAGACTACATATTTGCCTCGAC GTCGACGGTGTAGGGGGGATAGTAACTGCGTACGACACGAGGTTTTGGAA AAAGGGGGAAGTGTTTATACTAGACGACTCGTACTTGCACGCAGGATTTT ACGAAGGCACGCGTCCTCGGGTCATACTTATGGTAGATATTGCGAAGCGA GGGCTAAATCAGTCCCACGTAGATCATTTCTTACAACAATCTTTTAGACA CTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig101:36508..37111-

>mRNA_L-elsbetiae_contig101.147.1 ID=mRNA_L-elsbetiae_contig101.147.1|Name=mRNA_L-elsbetiae_contig101.147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=600bp|location=Sequence derived from alignment at L-elsbetiae_contig101:36508..37111- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCAACATTTTTCACCATCCTGTATCCAGGGGCATCTATCCGGCCACA
CTTCGGGCCTACCAATTACAAGTATAGACTACATATTTGCCTCGACGTCG
ACGGTGTAGGGGGGATAGTAACTGCGTACGACACGAGGTTTTGGAAAAAG
GGGGAAGTGTTTATACTAGACGACTCGTACTTGCACGCAGGATTTTACGA
AGGCACGCGTCCTCGGGTCATACTTATGGTAGATATTGCGAAGCGAGGGC
TAAATCAGTCCCACGTAGATCATTTCTTACAACAATCTTTTAGACACTAG
ATGGCAACATTTTTCACCATCCTGTATCCAGGGGCATCTATCCGGCCACA
CTTCGGGCCTACCAATTACAAGTATAGACTACATATTTGCCTCGACGTCG
ACGGTGTAGGGGGGATAGTAACTGCGTACGACACGAGGTTTTGGAAAAAG
GGGGAAGTGTTTATACTAGACGACTCGTACTTGCACGCAGGATTTTACGA
AGGCACGCGTCCTCGGGTCATACTTATGGTAGATATTGCGAAGCGAGGGC
TAAATCAGTCCCACGTAGATCATTTCTTACAACAATCTTTTAGACACTAG
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