mRNA_L-elsbetiae_contig101.138.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig101.138.1 vs. uniprot
Match: B5LWD5_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWD5_9PHYC) HSP 1 Score: 494 bits (1272), Expect = 2.660e-168 Identity = 280/543 (51.57%), Postives = 359/543 (66.11%), Query Frame = 1 Query: 1 MSSTITDLSTYGDVKGRDSYARNSFFSVKGDGVSSNAITQGYFGVPSATDAEYELARISVSEG-----------------VQNDLAE--------------------------------------GSRLELVSDAADPAINFVLGDL-TGTPSTPLIVTEGVVAVTGSLTIDGADILTTLTDVNPWTHTGSTTQLKSDYNLLEVNVANLYSTSVALDVNGSTRFRGNDIFFYDEPLDTFYSTLAYSESTGEVRLRSSRAGDSIVFSTTSGSDNDYLPRLTLDDGAGTQSATFLNTNVGIGAPPSGSYAFEVTGNASVATGLVSGGDIDLTGNNLTNVTQIESSDG-LAEQARIILSSDATSPRVDIILGDLSAGTALTAATFTETLSTVATPTTFTDNVIITGDLTVEGTQVVFNTTSVEVEDISIEMGNLATQHTDLQNGGIILGSGVTGITTPSILYSEPEMRWNSSVGVHVPSTSTLAVGNTTSISEGEVALKTDSAFVYLGANKQWRMGIVNDVDGDHFQISHDDLGTQTIWEVKMDIL 1458 MS+TI DL+ YGD KGRD + RN KG G SN +TQ ++G+PS TD EYELARISVSE V ND+ GSR+ELVSD DP I FVLGDL T +TPL++T+ VA+ G LTIDG D+ +TD NPWT T S TQLK +YN++E+NV N Y+TSVALD+NGS R RGN +FFYDE FY+TL+Y+ES +R +S+AGDS+ +TTSG+D+ +L RL +DDG+ T +A F N NVGI P+GSYAFEV GN S +TGLVSGGD+DL+G+NL NV I+S+D AE+A ++L+SD TSP++DI+LG GT + A F T + TP TF +V ITG+L V GTQVV NTTSVEV+DI+IEMGN A+ HTD+ GGI LGS V GITTP++LYSE + RW +SVG++VP L VG+ T +++ V+LK++ A + GANKQWR+GIVND DGDHFQI+HDD GT+T + K+D+L Sbjct: 1 MSTTIVDLAQYGDTKGRDCFVRNLRQVTKGTGTESNVVTQEFYGIPSTTDEEYELARISVSENSVDDEIGTFTVGVSDGTVLNDVLSLSNIGSAINTGTMTINADNIAATGTLDIGTVQRNSGTLGSRVELVSDETDPGIYFVLGDLATDANTTPLVITQTTVAIDGQLTIDGTDVFEAITDGNPWTSTESVTQLKGEYNMVEINVENSYTTSVALDLNGSVRVRGNSVFFYDESNGVFYNTLSYTESDSRIRFLASKAGDSLALATTSGTDDVFLDRLVIDDGSDTTNAIFQNVNVGINGTPTGSYAFEVVGNGSFSTGLVSGGDVDLSGSNLLNVAAIQSNDSSAAERASLVLTSDETSPKLDIVLG----GTEV--ANFEGTSVSFGTPATFDQDVTITGNLNVTGTQVVLNTTSVEVQDINIEMGNAASSHTDIHGGGISLGSSVAGITTPTLLYSETDARWETSVGLNVP---VLTVGSNTEVADDSVSLKSNDANFFFGANKQWRLGIVNDADGDHFQIAHDDDGTET-YVTKLDVL 533
BLAST of mRNA_L-elsbetiae_contig101.138.1 vs. uniprot
Match: Q6XLZ8_9PHYC (FirrV-1-B38 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLZ8_9PHYC) HSP 1 Score: 491 bits (1264), Expect = 5.270e-167 Identity = 277/544 (50.92%), Postives = 357/544 (65.62%), Query Frame = 1 Query: 1 MSSTITDLSTYGDVKGRDSYARNSFFSVKGDGVSSNAITQGYFGVPSATDAEYELARISVSEGV-------------------------------------------------------QNDLAEGSRLELVSDAADPAINFVLGDLT---GTPSTPLIVTEGVVAVTGSLTIDGADILTTLTDVNPWTHTGSTTQLKSDYNLLEVNVANLYSTSVALDVNGSTRFRGNDIFFYDEPLDTFYSTLAYSESTGEVRLRSSRAGDSIVFSTTSGSDNDYLPRLTLDDGAGTQSATFLNTNVGIGAPPSGSYAFEVTGNASVATGLVSGGDIDLTGNNLTNVTQIESSDGLAEQARIILSSDATSPRVDIILGDLSAGTALTAATFTETLSTVATPTTFTDNVIITGDLTVEGTQVVFNTTSVEVEDISIEMGNLATQHTDLQNGGIILGSGVTGITTPSILYSEPEMRWNSSVGVHVPSTSTLAVGNTTSISEGEVALKTDSAFVYLGANKQWRMGIVNDVDGDHFQISHDDLGTQTIWEVKMDIL 1458 MS+ + DLS YGD KGR+ + +N F KG G N +T G++G+PS T EYE+ARISV+EG +N A GSR+EL+SD +PAINFVLGDL S+PLIVT VAV G+LTIDG ++ +T NPWT T + TQLKSDY+ +E+NV N Y+T+VALDVNGS R RGN +FFYDEP TFYS L+Y ES +RL +S+AGDSIV +TTSGSDN Y+ RLT DG+GT +A F N NVGI A PSG+++ EV GNAS +TGL SGGD D + N+L NV+ I+SSD EQA+I+L+SD++SP++DI+LGDL A T T ATF E+ ++ ATP F+ +V I G+L V GTQV+ NTT VEV+DI+IEMG A+ H+D+ GG+ILG+ VTGIT PS+LYSE RW +SV ++VP+ L VG T I+ V+LK+DS +Y GANKQWR+ IV D DG HFQ++HDD G+QT + KMD+L Sbjct: 1 MSTAVVDLSQYGDTKGRNGFLQNIFQVTKGTGSEINELTHGFYGIPSTTSDEYEMARISVTEGSVDGGVGTFAVGVHDGSALNDIIVLNNASSDINTQTLNVNATDVFASGNLDVGIVQRNSAALGSRVELISDETEPAINFVLGDLADIENAASSPLIVTSSTVAVNGALTIDGTNVFEAITAGNPWTSTDAVTQLKSDYSSVEINVVNPYTTTVALDVNGSVRVRGNSLFFYDEPNTTFYSALSYLESDSTLRLAASKAGDSIVLATTSGSDNTYVDRLTFSDGSGTTNAVFENVNVGINATPSGTFSLEVGGNASFSTGLHSGGDADFSANSLVNVSAIQSSDQNTEQAQILLTSDSSSPKIDIVLGDL-ANTPTTVATFDESTASFATPAAFSGDVTIGGNLNVAGTQVILNTTVVEVQDINIEMGYAASAHSDIDGGGVILGAAVTGITVPSLLYSESNARWETSVDLNVPN---LTVGTDTEITNSSVSLKSDSGELYFGANKQWRLSIVTDTDGSHFQVAHDDDGSQT-YVTKMDVL 539
BLAST of mRNA_L-elsbetiae_contig101.138.1 vs. uniprot
Match: Q9J3U5_ESV1K (EsV-1-56 n=2 Tax=root TaxID=1 RepID=Q9J3U5_ESV1K) HSP 1 Score: 365 bits (938), Expect = 9.460e-118 Identity = 228/549 (41.53%), Postives = 311/549 (56.65%), Query Frame = 1 Query: 1 MSSTITDLSTYGDVKGRDSYARNSFFSVKGDGVSSNAITQGYFGVPSATDAEYELARISVSEGVQNDL-------------------------------------------------------AEGSRLELVS-DAADPAINFVLGDLTGTPSTPLIVTEGVVAVTGSLTIDGADILTTLTDVNPWTHTGSTTQLKSDYNLLEVNVANLYSTSVALDVNGSTRFRGNDIFFYDEPLDTFYSTLAYSESTGEVRLRSSRA-----GDSIVFSTTSGSDNDYLPRLTLDDGAGTQSATFLNTNVGIGAPPSGSYAFEVTGNASVATGLVSGGDIDLTGNNLTNVTQIESSDGLAEQARIILSSDATSPRVDIILGDLSAGTALTAATFTETLSTVATPTTFTDNVIITGDLTVEGTQVVFNTTSVEVEDISIEMGNLATQHTDLQNGGIILGSGVTGITTPSILYSEPEMRWNSSVGVHVPSTSTLAVG-NTTSISEGEVALKTDSAFVYLGANKQWRMGIVNDVDGDHFQISHDDLGTQTIWEVKMDILQ 1461 MS+ I DL+ YG+++GRD ++RN F SVKGDG+++ ++TQ ++G+PSA+D E LA + VSEGV +D A+ + +E+V D A P INF +GD T L V+E VTG L ++G DIL T+T+ N W G+T QLKS+Y L+ VN N ++TSVALDVNGS RGND F YD ST+++ ++ + LR+S A DS+VF TTSG +N YL RL + G G QSATF N NVGIGA PSG++ FEV+G + + G++D++GN+L NV+ I SS+ LAEQA I L+S AT P++D +LGDL AGT TA T TE+ +TV NTT V VED I++ AT H +L GG LG+ VTGI PS+LY+ + RW+SS+ ++VPST+ VG N T +S + + +D ++LGA KQWR+ + ND DH HDD GTQT W+ KMDI+Q Sbjct: 1 MSTDIIDLAQYGNMRGRDVFSRNLFQSVKGDGLTAASLTQSFYGIPSASDTESSLATVKVSEGVADDTVGTYTVGVNDGAVINDVLQLSSASSKITSSAITLDTPLVQTDGTIEAPKVVQHADAKSAEVEIVGGDGATPLINFNIGDTASGAPTVLSVSETSADVTGVLNVNGTDILQTITNGNAWEIDGTTVQLKSEYPLVNVNALNAHTTSVALDVNGSIVNRGNDFFMYDSTGLANLSTVSFDNASNSLALRTSLADQGGVSDSMVFQTTSGVNNTYLDRLKFEGGVGDQSATFSNVNVGIGAAPSGTHRFEVSGTSLLTGDATVVGNVDVSGNDLLNVSDITSSNALAEQATIALTSSATDPQIDFVLGDL-AGTPTTAMTITESAATVNVXXXXXXXXXXXXXXXXXXXXXTVNTTEVRVEDKEIDLAYNATTHAELDQGGFTLGTDVTGIVVPSVLYNLADTRWDSSITMNVPSTNKFTVGGNVTELSSSGLDVNSDDGVIHLGATKQWRIRMENDGTHDHLYFEHDDDGTQTTWQTKMDIMQ 548 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig101.138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig101.138.1 >prot_L-elsbetiae_contig101.138.1 ID=prot_L-elsbetiae_contig101.138.1|Name=mRNA_L-elsbetiae_contig101.138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=488bp MSSTITDLSTYGDVKGRDSYARNSFFSVKGDGVSSNAITQGYFGVPSATDback to top mRNA from alignment at L-elsbetiae_contig101:15860..17488- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig101.138.1 ID=mRNA_L-elsbetiae_contig101.138.1|Name=mRNA_L-elsbetiae_contig101.138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1629bp|location=Sequence derived from alignment at L-elsbetiae_contig101:15860..17488- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig101:15860..17488- >mRNA_L-elsbetiae_contig101.138.1 ID=mRNA_L-elsbetiae_contig101.138.1|Name=mRNA_L-elsbetiae_contig101.138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2928bp|location=Sequence derived from alignment at L-elsbetiae_contig101:15860..17488- (Laminarionema elsbetiae ELsaHSoW15)back to top |