|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 272 |
| Cds size | 240 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815240.2777073-CDS-L-elsbetiae_contig1008:24789..24949 | 1622815240.2777073-CDS-L-elsbetiae_contig1008:24789..24949 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1008 24790..24949 - |
| 1691682790.1025064-CDS-L-elsbetiae_contig1008:24789..24949 | 1691682790.1025064-CDS-L-elsbetiae_contig1008:24789..24949 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1008 24790..24949 - |
| 1622815240.2900207-CDS-L-elsbetiae_contig1008:29398..29478 | 1622815240.2900207-CDS-L-elsbetiae_contig1008:29398..29478 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1008 29399..29478 - |
| 1691682790.1138792-CDS-L-elsbetiae_contig1008:29398..29478 | 1691682790.1138792-CDS-L-elsbetiae_contig1008:29398..29478 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1008 29399..29478 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815240.3034549-UTR-L-elsbetiae_contig1008:29478..29509 | 1622815240.3034549-UTR-L-elsbetiae_contig1008:29478..29509 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1008 29479..29509 - |
| 1691682790.1253643-UTR-L-elsbetiae_contig1008:29478..29509 | 1691682790.1253643-UTR-L-elsbetiae_contig1008:29478..29509 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1008 29479..29509 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1008.123.1 >prot_L-elsbetiae_contig1008.123.1 ID=prot_L-elsbetiae_contig1008.123.1|Name=mRNA_L-elsbetiae_contig1008.123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=80bp
MSSLKKTCDFCASRKRSCDGLARRRCSACIATKQPVCHYRPRRPWRAHPS
KHNDDAAMALSLSLHPGGKSFCRTDDEGGR back to topmRNA from alignment at L-elsbetiae_contig1008:24790..29509- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1008.123.1 ID=mRNA_L-elsbetiae_contig1008.123.1|Name=mRNA_L-elsbetiae_contig1008.123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4720bp|location=Sequence derived from alignment at L-elsbetiae_contig1008:24790..29509- (Laminarionema elsbetiae ELsaHSoW15)
CCAACAGGCCCCAGCGCACAACGACGTCGCTATGTCGTCTTTGAAGAAGA
CATGTGATTTTTGCGCTTCACGGAAGAGGTCATGTGATGGCCTCGCACGC
CGGCGTTGTAGGTGAGGTTGTTTTGTAGCCTGTACCTAAACCTCATGCTT
TCTTCGCATCGATACGCCGGGAAACAATTTGGCCACTTTGGGCCTTTTCG
CCGGGCACGGCACAGAATAGAAGAATCGCAGAATCGACTTGCGATATTTC
AGTCGGCGACGGCCTTGGAAAGCCCGCGTGAGTCTCCGACACTTTTTTCC
GCTATAACCGTGGTCTACGGAGGCAGCGCAGTCAGCGAACATCTGAAATC
GTAGGGTCCTGGGTGCCTGCCTGCGCTTTTGTTTCTCGCGGATCCGCGAA
TTTCTGAAATTTCCCGGCTCAACCATCGACTTCAAAGGCCGGGCTCGCAT
AGCCTATGCATCGCGGAACGTTACAGTATCCGAAAACCTTGGGTGATTGG
TGTGGTACGCAATTTCCCGCTCTATGCAGCAAAATCAGGACAGAGCAGCA
CTTAAGATTCAAGAGTTGTCTACAATACCAAGACACACGGACTGAGATCG
ATTGAAAAATATAGGCGGGTAATTATGTAAAATTATAAAATTATGAACTT
CCGTATCTCCACCCTCAAAACGCGAGCGTCTCTGTGTCAGTCAGCGACCA
ATGCCACGTATCTCCACCCTCGAAACGCGAGCGTCTCTAGGTCATCGACC
AATGCCACTGACATGATGCAATCTAGGGGCTAAAATGTGCCCCTCTGTCG
TGGCATTGATCCATCGTGTCATCTAAAGATTCCGTCTCTCCGCTGGGAAG
CAATGGACAAACACCGACTTACAAAGGATTTGATTATTCACAACAGTGTA
GTAGTGTCCCGTCGTTTTTTTGTGGGGAGATTCCTTCGGTTGATGTTCTG
ATTTATTCATGAGCGCAGTAGTTAGAAGGTAGTTACGGGACACGGAGACA
AGAAGCATCAATTTCGGGTCGAGGGGCTACATTTCAATTTTGGGGGCGAA
CACCAGCAGTGGTAATAAATATTTCTTAATTTCTGGACTTGCCCAAACTG
CTGATTTTCTCATGTTTTTTAGTTGGGCGTTCTTCGACGTGTGTCCATCC
GTACTCGCACATACTCCGTGCATACAATGTAAGAGACCGCAAACGTGAAC
AGAGACTGTTTCTTTTATTCTTCGCCGTGCTCTCCTCGCTGAAGGAGAGG
GTCTCCCCAACCGCCTACATAACACTGACAAGAAATAAAGAGCCACCGAC
AACTACATAGTCTAACACTGATAAGGAATAAAGAGCCACCGACAACTTTC
TCCGGCCATGACAAAATACATTTCTCCAAAGCAATATCAACATGCCAACA
ACCCCCCCGCTGTAATAGTCCACAACAAGCCATAGAAAACTATAAACAAT
GCTGCTGGTGCCTTCTAGAATCATCGTCACGTACACCATTCCCAGCCCCC
TAGGATTTTTGATGCAATGAAAGCAGCAATGCTCGTGCAACAGATACATA
AAGTACAATGAAAGAAATACAGAAGTAAAAAAGAAGAGCAACAACAAGAA
CAATAATACAGATCCAATCCGACGAACACCAAGAGAAAATAAAGCGGTGA
CAAGCAAAGTCACTTGATCTTCATCACAAAGCCAAAGTGGGAGAAAAACG
ATGCTTTGTGCAGCGGCTCAGTCTAAAAGTCTCCGTGCTGCAAAGCCGTG
CCCGCTGCCGCCTCGGCTACCACCACCACGCAATCTTGGACACCATATTG
TACAAGACAAAGTCCTTCCCGTCGTAAAAAGCGGGGTCATGTTTTTCACC
CCATAGTCACCCCGCCCCCGCTGTGCATCGCCGCTGGTAGCGTGCACAGA
AGCAGCGCTGTCTCCGATCCACCACTCAGTGTTCTCGCCGCTGCTACCAC
CGCGCTGCCCGAGACCGTTACGGCCTCTGCCGCCGCCGCCGCCGCCTTCA
CTACTGCCACCGCCGCTCCCGCCGTCAGGCGTGCCGTCACCGCGGCCCGA
GGTCACCGTTGCTGCTACCACGGCCGCCGCGCTCATCATGTTGTTCGGGG
CCCAAGACGACCACCGGTGATGCCGCGGAACCCGCCTTCGCCGCGCTGCC
GCCGCCGTCGCCGATGCCCCTGTGCTTGCCGGCCCCGAGGGCGCCGCCGC
GGCTACCGCGAGCATCATACTGTCCGGGGTCAACGCGACCGACGGTGATA
CCGCTGCTGCCGCCGCCGCCGCTGCCGCCCCCGCGCTCACCTGCCCCGAG
GGCGCCGCTGCGGCCGCCGCGAGCACCATGCTGTCTGGGGCCAACACGGT
CGCCGGTGGCACCGCTGCCGCTGCTGCCGCTGCCGCGATTACCATGCTGT
CCGTCGTCATCTCCCCACGCGCGGACCACCTCCTCCTGCTGGGGCTTCAT
CTGCAGTTGCTGCCGCGAACAATGCACCCTCGTGTCACCAAACACCGCAC
CTGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCGTAGTGCGAGACATC
GAGGAGTTGAGCAAACAGGTCCCTCACATGGTCGAAATCGGTGGACAGCG
TCCGACGAAGTATTGCGATGATTTCACTCTCCGCAAAAGCACCGTTGGCT
GCACGGTAGGTATTTTGCCAGAACTTTGTCGAACTCCAAAAAGAAATCAT
GCGGGTCCTCGCCTAGCTGCATTCTCATGTTCGCTACATATTGCTTCGTT
GACTCCCTCTCGGTGTCACTAGGAAGGCAAGCAAAAATTCCGCGCCGCCT
CCCATACAACCGAGCTCCAGGATCTTGGAAATAAATTTCGCCCCTTTCAG
TGAGACCACCAAGTGATCAAGCACACGCTCGTAGTCTCTTGCTTTTTCTA
GGCCGTGGATGATGATGAGTTCGCGCCTTGGCGGCCCGTTGAGCAGGGAG
ACAAGTGCACCCTCGGACTTGTACAGGCAGTGCAGCAGACCCCGGCTGCT
CGTGAAAATCTGGAACAGCATCTTGAACTACAAGACAAAGTCCTTCCCGT
CGTATGTATGTACAATGGTGTTATTCTGTTTTTCACCCCATATAGTCATC
CCGCCCCCGATCCTCGGAGTAGCTCGCCGACCTCTCACCTACACCCCCAT
AAAAAATCCCAGCCGTGTACCCGGCATCGCGCTCTCCAGCTGCTTCTCCA
GCTTCCCCGGCTGCTTCCCCAGCCGGCTGCTTCCTCAGCTTAAACTCTCC
TGGCTGCTTCCCCAGCCGCCGCTTTCTCGGCTTCCATCTTCTCGTACTCT
CCCTTCAGCTCTGAAACCTTGTTCTGCAAAGCTCCGAGCTCATTCCCTTC
ATCATCACTGCCGCCACCATGACTGAACCGACGCTAGCCTGGCCAGGCCA
GGGTCGCACGATATATCGTGTTAGTGCGCGGTCTGCTCCTCGCCCTCAGC
GAGGTATGCTTCGAGTATGGGAACTGTGTTAACCCAGGAACAGTTGGTAA
CACAGGTGTATAGAAACCCGTACATTGTAAGTGGGCTCGGTGATCCTTTA
ACTCTCCCCGCGAGACACACACACACATGTAACCCCCTGGGGATACACAC
CACACAGATCGGACTAAAGCACCACGAACATGTTTCTTATCTTTACGCCC
AGTTTTGAGGCGTGTTTCTCCGTCGTATTTTCTAGTTTTGCGCGGAAATT
TGAGGGCTGCATAGTTCCGTTCTCGACATTTATGAATGCCGGGTCGCAGC
TGTAATTTCGAGCTCTCTTGGGCAGAACATTTCCTCAACAAAATTTGCGC
CGAATAGGCGTCCACAACCCGCAACCTCAGTATGTACGGCAAAACAAGCC
CAGTAGTTGGTCGGGAAGGGGCTACGCAATGGTGTGTTTTCAGCCCCCTA
GTTTCTCCGTTTTAAAAATAAACAATCAAAGATGGAACCTACCCCACACT
AGAGCAAGGACCCGATATGGGGCTCAAACGGTATTCCATACAGTGACGTA
ATATTTGGCGAAGCGAGCAGAAAAACAACCTAAAATATCAGAAGAGTTCA
GCATCTCCCTTGCAAAGATTTGCGAGGTCGGCCAACAAGTATTCAGGCGG
GTAGATGCCCGCCGTGATGCCGTAATGTTGTCATCGACTTCAAAATAGGA
ACACATCGCATTGTTGAACCAAATCAAAATGCTGGTTTAATATAGACTAT
GTGGGTTACTGCTTTGAGGAAAACATACAATCCGTTTTGTTTTCATCCTT
ATTTAGTCTAGATATGTTTTGTATAGGCGTCCTATTTTGCTGTCTCTTGT
AAAAGCATGTTTCTTAAAACGTACTTCTGGGCCTGACAATTTTGCTGTCT
CTTGTAAAAGCATGTTTCTTAAAACGTACTTCTGGGCCTGACAAGTTTGA
TACAATTTTGCTGAGCAGCAATTTGATCTACAAAATAATAAGCTCTTACC
AGAGTAGTTTTTTGTCTCGAACTGGAGTTTTTCTTTTGGGCGCTGAACCT
TGTAGACTACAAACACGCCTCATCCAAAGCCTGCTCCATTGTTTTCGCGC
GCGCACCCAGCGCCTGCATCGCTACGAAGCAGCCGGTGTGCCACTACCGG
CCTCGGCGGCCGTGGCGTGCTCATCCCTCCAAGCACAACGACGACGCCGC
CATGGCTCTCTCGCTGTCGCTGCATCCGGGTGGTAAAAGTTTTTGTCGGA
CGGATGACGAAGGTGGACGC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1008:24790..29509- >mRNA_L-elsbetiae_contig1008.123.1 ID=mRNA_L-elsbetiae_contig1008.123.1|Name=mRNA_L-elsbetiae_contig1008.123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=480bp|location=Sequence derived from alignment at L-elsbetiae_contig1008:24790..29509- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGTCTTTGAAGAAGACATGTGATTTTTGCGCTTCACGGAAGAGGTC
ATGTGATGGCCTCGCACGCCGGCGTTGTAGATGTCGTCTTTGAAGAAGAC
ATGTGATTTTTGCGCTTCACGGAAGAGGTCATGTGATGGCCTCGCACGCC
GGCGTTGTAGCGCCTGCATCGCTACGAAGCAGCCGGTGTGCCACTACCGG
CCTCGGCGGCCGTGGCGTGCTCATCCCTCCAAGCACAACGACGACGCCGC
CATGGCTCTCTCGCTGTCGCTGCATCCGGGTGGTAAAAGTTTTTGTCGGA
CGGATGACGAAGGTGGACGCCGCCTGCATCGCTACGAAGCAGCCGGTGTG
CCACTACCGGCCTCGGCGGCCGTGGCGTGCTCATCCCTCCAAGCACAACG
ACGACGCCGCCATGGCTCTCTCGCTGTCGCTGCATCCGGGTGGTAAAAGT
TTTTGTCGGACGGATGACGAAGGTGGACGC back to top
|