mRNA_L-elsbetiae_contig10078.119.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10078.119.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 136 bits (342), Expect = 1.070e-33 Identity = 75/148 (50.68%), Postives = 94/148 (63.51%), Query Frame = 1 Query: 1 GETRRHTAFKFALSQACEGGGKRWYTSTLELRLVSKEFCQACRGVPTLRVLVNHQTPPRLWSPPTKQHYDDS-GRKSNDEESVPAVRAVALTWALPIEVLIQTAAIWRWTWLEDLQLDTHVTAASLESLVWPIRLKRLVVGHNFNEPI 441 G TR AF ALSQACEGG KRWYTST EL+L S + C+ACR PTL V V TP LWSPPT Q ++ K VP VRA+ LTWA +E L+Q AAI W+ E L++ + AASL S+VWP+ L +LV+ +F+ P+ Sbjct: 5 GYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDFHIPM 152
BLAST of mRNA_L-elsbetiae_contig10078.119.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 124 bits (311), Expect = 2.220e-26 Identity = 75/177 (42.37%), Postives = 93/177 (52.54%), Query Frame = 1 Query: 1 GETRRHTAFKFALSQACEGGGKRWYTSTLELRLVSKEFCQACRGVPTLRVLVNHQTPPRLWSP---PTKQHYDDS--------------------------GRKSNDEESVPAVRAVALTWALPIEVLIQTAAIWRWTWLEDLQLDTHVTAASLESLVWPIRLKRLVVGHNFNEPIA 444 G +R A A+SQA EG GKRWYTSTLELRL S E C+ACR VPT+ V V+ TPP LWSP PT+ H S K+ VP +A+ LTWALP E+L+Q A+ WT LE LQL ++ + L S+ WP LKRL + F I+ Sbjct: 5 GASRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVSVAWPQNLKRLALETGFEAAIS 181
BLAST of mRNA_L-elsbetiae_contig10078.119.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 118 bits (295), Expect = 6.140e-24 Identity = 70/133 (52.63%), Postives = 84/133 (63.16%), Query Frame = 1 Query: 22 AFKFALSQACEGGGKRWYTSTLELRLVSKEFCQACRGVPTLRVLVNHQTPPRLWSPPTKQHYDDSGR--KSNDEESVPAVRAVALTWALPIEVLIQTAAIWRWTWLEDLQLDTHVTAASLESLVWPIRLKRLV 414 AF AL+QAC+G KRWY STLEL+LVS E C ACR V TL V V QTPP LW P ++ H + R K VP V+A LTWALP+ VL Q +A + + +TH +AASLES VWP RLKR+V Sbjct: 12 AFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFP-SQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMV 143
BLAST of mRNA_L-elsbetiae_contig10078.119.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 115 bits (289), Expect = 2.400e-23 Identity = 70/139 (50.36%), Postives = 86/139 (61.87%), Query Frame = 1 Query: 7 TRRHTAFKFALSQACEGGGKRWYTSTLELRLVSKEFCQACRGVPTLRVLVNHQTPPRLWSPPTKQHYDDSGRKSNDEES-VPAVRAVALTWALPIEVLIQTAAIWRWTWLEDLQLDTHVTAASLES-LVWPIRLKRLVV 417 TR AF ALSQACEGG KRWY STLEL+L S + C+ACR L V V+ QTP LWS T Q ++ + S VP VRA+ LTWAL +E L++ AAI WTW E L+L +SL S +VWP L +LV+ Sbjct: 9 TRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVL 147
BLAST of mRNA_L-elsbetiae_contig10078.119.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 111 bits (277), Expect = 1.140e-22 Identity = 67/134 (50.00%), Postives = 85/134 (63.43%), Query Frame = 1 Query: 22 AFKFALSQACEGGGKRWYTSTLELRLVSKEFCQACRGVPTLRVLVNHQTPPRLWSPPTKQHYDDS--GRKSNDEESVPAVRAVALTWALPIEVLIQTAAIWRWTWLEDLQLDTHVTAASLESLVW-PIRLKRLV 414 AF AL+Q C G KRWY STLEL+LVS EFC ACR VPTL V V+ QTP LWSP K H R++ VPAV+A LTWAL +EVL+QT+A+ + + ++ + + ASL S+ W + LKRLV Sbjct: 20 AFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSP-CKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLV 152
BLAST of mRNA_L-elsbetiae_contig10078.119.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 107 bits (267), Expect = 1.430e-22 Identity = 64/130 (49.23%), Postives = 77/130 (59.23%), Query Frame = 1 Query: 34 ALSQACEGGGKRWYTSTLELRLVSKEFCQACRGVPTLRVLVNHQTPPRLWSPPTKQHYDDSGRKSND---EESVPAVRAVALTWALPIEVLIQTAAIWRWTWLEDLQLDTHVTAASLESLVWPIRLKRLV 414 AL+QAC+G KRWY STLEL+LVS E C ACR L V V TPP LWS T + ++S + VPAV+A+ TWALP++ L Q AA E D H AAS+ES+VWP LKRLV Sbjct: 96 ALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSR--TTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLV 223
BLAST of mRNA_L-elsbetiae_contig10078.119.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 1.660e-17 Identity = 63/164 (38.41%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 22 AFKFALSQACEGGGKRWYTSTLELRLVSKEFCQACRGVPTLRVLVNHQTPPRLWSPPTKQH--YDDSGRKSNDEESVPAVRAVALTWALPIEVLIQTAAI--------------------WRWTWLEDLQLDTHVTAASLESLVWPIRLKRLVVGHNFNEPIAG 447 AF AL QA +G KRWY STLEL+LVS EFC ACR + V ++ QTP LWSP K H R++ VPAV+A WALP+E+L+ +A R W + L + S+ S+ WP L+ L G FN+PI G Sbjct: 32 AFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSP-RKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYSERSVNSVSWPACLQELSFGDFFNQPIIG 194
BLAST of mRNA_L-elsbetiae_contig10078.119.1 vs. uniprot
Match: A0A6H5L3M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M5_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 4.330e-17 Identity = 61/162 (37.65%), Postives = 78/162 (48.15%), Query Frame = 1 Query: 43 QACEGGGKRWYTSTLELRLVSKEFCQACRGVPTLRVLVNHQTPPRLWSPPTKQHY--DDSGRKSNDEESVPAVRAVALTWALPIEVLIQTAAIWRWT-------------------WLEDLQ-----LDTHVTAASLESLVWPIRLKRLVVGHNFNEPIAGV 450 Q+C G KRWYTS EL+LVS +FC CR LRV V H PP LWSP Y D+ + VPAVRA TW++P++ L++ + W W + L+ LDT V AS WP L+ L G +FN+PI GV Sbjct: 114 QSCVEGKKRWYTSIRELQLVSLKFCGVCRSTSILRVRVEHNAPPSLWSPTKSFSYALPDAWNR------VPAVRAYGWTWSIPVDTLLKVCDLRYWAKAELSRRGSFPEAKLASVVWPQGLKQLEFDLDTAVEKAS-----WPASLQSLTFGCSFNQPILGV 264
BLAST of mRNA_L-elsbetiae_contig10078.119.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 5.600e-16 Identity = 55/132 (41.67%), Postives = 75/132 (56.82%), Query Frame = 1 Query: 22 AFKFALSQACEGGGKRWYTSTLELRLVSKEFCQACRGVPTLRVLVNHQTPPRLWSPPTKQHYDDSGRKSNDEESVPAVRAVALTWALPIEVLIQTAAIWRWTWLEDLQLDTHVTAASLESLVWPIRLKRLVV 417 AF AL++ C+GG +RWY STLEL+ VS EFC ACR VPT +H T GR + P VRA +LTWAL ++VL+Q+ A+ + + H +AA+L S++W RLKRLV+ Sbjct: 22 AFIVALNRTCDGGEQRWYASTLELQPVSLEFCVACRRVPT-----SHST-------------STVGRLVSGVSRAPVVRAYSLTWALSMDVLLQSCAMELQRGSKYRRSGGHSSAANLASMLWLQRLKRLVL 135
BLAST of mRNA_L-elsbetiae_contig10078.119.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 5.230e-14 Identity = 38/58 (65.52%), Postives = 43/58 (74.14%), Query Frame = 1 Query: 22 AFKFALSQACEGGGKRWYTSTLELRLVSKEFCQACRGVPTLRVLVNHQTPPRLWSPPT 195 AF AL+Q C+G KRWY STLEL+LVS EFC ACR VPTL V V+ +TP LWSP T Sbjct: 44 AFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRT 101 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10078.119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10078.119.1 >prot_L-elsbetiae_contig10078.119.1 ID=prot_L-elsbetiae_contig10078.119.1|Name=mRNA_L-elsbetiae_contig10078.119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=448bp GETRRHTAFKFALSQACEGGGKRWYTSTLELRLVSKEFCQACRGVPTLRVback to top mRNA from alignment at L-elsbetiae_contig10078:4743..6708+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10078.119.1 ID=mRNA_L-elsbetiae_contig10078.119.1|Name=mRNA_L-elsbetiae_contig10078.119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1966bp|location=Sequence derived from alignment at L-elsbetiae_contig10078:4743..6708+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10078:4743..6708+ >mRNA_L-elsbetiae_contig10078.119.1 ID=mRNA_L-elsbetiae_contig10078.119.1|Name=mRNA_L-elsbetiae_contig10078.119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2688bp|location=Sequence derived from alignment at L-elsbetiae_contig10078:4743..6708+ (Laminarionema elsbetiae ELsaHSoW15)back to top |