mRNA_L-elsbetiae_contig10072.116.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10072.116.1
Unique NamemRNA_L-elsbetiae_contig10072.116.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10072.116.1 vs. uniprot
Match: D8LTA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA0_ECTSI)

HSP 1 Score: 556 bits (1433), Expect = 1.190e-192
Identity = 280/304 (92.11%), Postives = 287/304 (94.41%), Query Frame = 3
Query:   72 MQIFVQGLGGGHFTVDVSSLGDRRVSTLRSAVECLTGVPADLQRLTAGVRDLGSSLSADRTLGDYGIEHGSTVRLSLRLRGGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAITVQTRNVIKIGRPGYKVTKARDLTSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWDKETKKFTLQLYFEDESNAAPPGR 983
            MQIFVQGLGGGHF VDVSSL D RVSTLRSAVE L+GVP  LQRLT+G RDL S  ++   L DYGIEHG TVRLSLRL GGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAITVQTRNVIKIGRPGYKVTKARDL+SNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNW+KE KKFTLQLYFEDE+NAAPPGR
Sbjct:    1 MQIFVQGLGGGHFAVDVSSLRDYRVSTLRSAVEGLSGVPPHLQRLTSGARDLASPSAS---LDDYGIEHGCTVRLSLRLLGGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAITVQTRNVIKIGRPGYKVTKARDLSSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWEKEAKKFTLQLYFEDEANAAPPGR 301          
BLAST of mRNA_L-elsbetiae_contig10072.116.1 vs. uniprot
Match: A0A6H5JLB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB9_9PHAE)

HSP 1 Score: 414 bits (1063), Expect = 8.290e-138
Identity = 216/248 (87.10%), Postives = 223/248 (89.92%), Query Frame = 3
Query:   72 MQIFVQGLGGGHFTVDVSSLGDRRVSTLRSAVECLTGVPADLQRLTAGVRDLGSSLSADRTLGDYGIEHGSTVRLSLRLRGGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAITVQTRNVIKIGRPGYKVTKARDLTSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQ 815
            MQIFVQGLGGGHF VDVSSL D RVSTLRSAVE L+GVP+ LQRLT+G +DL S  ++   L DYGIEHG TVRLSLRL GGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNAL          TRNVIKIGRPGYKVTKARDL+SNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQ
Sbjct:    1 MQIFVQGLGGGHFAVDVSSLRDYRVSTLRSAVEGLSGVPSHLQRLTSGAKDLASPSAS---LDDYGIEHGCTVRLSLRLLGGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNAL----------TRNVIKIGRPGYKVTKARDLSSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQ 235          
BLAST of mRNA_L-elsbetiae_contig10072.116.1 vs. uniprot
Match: A0A835YVT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT4_9STRA)

HSP 1 Score: 412 bits (1059), Expect = 1.110e-135
Identity = 208/296 (70.27%), Postives = 236/296 (79.73%), Query Frame = 3
Query:   72 MQIFVQGLGGGHFTVDVSSLGDRRVSTLRSAVECL---TGVPADLQRLTAGVRDLGSSLSADRTLGDYGIEHGSTVRLSLRLRGGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAITVQTRNVIKIGRPGYKVTKARDLTSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWDKETKKFTLQLYF 950
            M++F +GL      +DV S      S +R A  CL   TG+PA LQRL+ G RDL      +  L   G+  GST+ L LRLRGG+D Q+R GSKFGGGGVMSE QA +DRRERLRKLA ET+DLNKDPYFM+NHLGKYECKLCLTLHNNEGNYLAHTQGKRHQ NLARRAAMEAKNA++KP P   VQTRNVIKIGRPGYKVTK+RD+ + QRSLLFEVDYPEA+DG QPRHRFMS+YEQKVEAP   YQYLLFAC+PYET+ FKVPN+ ID+ EGR FTNWD++ KKFTLQLYF
Sbjct:    1 MRLFCKGLDSRIIALDVPS------SDMREARACLEESTGIPASLQRLSDGRRDL----PGEGCLQSLGVSDGSTLHLCLRLRGGMDMQNRAGSKFGGGGVMSESQANIDRRERLRKLALETIDLNKDPYFMKNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQTNLARRAAMEAKNAVIKPAPITVVQTRNVIKIGRPGYKVTKSRDVHTRQRSLLFEVDYPEADDGVQPRHRFMSSYEQKVEAPSNDYQYLLFACEPYETVAFKVPNVPIDRSEGRLFTNWDRDGKKFTLQLYF 286          
BLAST of mRNA_L-elsbetiae_contig10072.116.1 vs. uniprot
Match: A0A7S2B1N4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B1N4_9STRA)

HSP 1 Score: 367 bits (943), Expect = 6.980e-119
Identity = 190/281 (67.62%), Postives = 217/281 (77.22%), Query Frame = 3
Query:  153 LRSAVECLTGVPADLQRLTAGVRDLGSSLSADRTLGDYGIEHGSTVRLSLRLRGGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALV-KPQPAITVQT--RNVIKIGRPGYKVTKARDLTSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWDKETKKFTLQLYFEDESN--AAPPG 980
            LR A+    G+PA    L A  R L       R + DY + HGST+ + LR+RGGIDFQHREGSKFGGGGVMSE QA  DRRERLRKLA ET+DL KDPYF++NHLG +ECKLCLTLHN EGNYLAHTQGKRHQQNLARRAA E +  L  KP  A       R+ IKIGRPGYKVTK+RD  + QRSLLFEVDYPEAE+G QPRHRFMSAYEQ+VEAPDK YQYLLFAC+PYET+ FK+PN  IDK EGRFFT+WD E+K+F+ QL+F+D S+  AAP G
Sbjct:    2 LREALSEREGIPACEMCLMANGRQLSEDF---RRVEDYSLGHGSTISILLRVRGGIDFQHREGSKFGGGGVMSETQANADRRERLRKLALETIDLEKDPYFLKNHLGTFECKLCLTLHNTEGNYLAHTQGKRHQQNLARRAAREEQLGLAAKPNTAKAALAAGRSSIKIGRPGYKVTKSRDAATKQRSLLFEVDYPEAEEGVQPRHRFMSAYEQRVEAPDKNYQYLLFACEPYETVAFKIPNHPIDKGEGRFFTSWDGESKQFSAQLFFQDPSSVKAAPQG 279          
BLAST of mRNA_L-elsbetiae_contig10072.116.1 vs. uniprot
Match: A0A7S3XZJ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZJ6_HETAK)

HSP 1 Score: 364 bits (934), Expect = 2.780e-117
Identity = 193/300 (64.33%), Postives = 223/300 (74.33%), Query Frame = 3
Query:   72 MQIFVQGLGGGHFTVDVSSLGDRRVSTLRSAVECLTGVP-ADLQRLTAGVRDLGSSLSADRTLGDYGIEHGSTVRLSLR--LRGGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAITVQTRNVIKIGRPGYKVTKARDLTSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWDKETKKFTLQLYFEDES 962
            MQIF++GL G     +V      R    R A+E   G+   D+   ++G   LG     D  +   G+  GS + L  R  L+GGIDFQHREG KFGGGG MS    A++RRERLRKLA ET+DL KDPYFMRNHLG YECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAA+EA++A +KPQ A  V TR  IKIGRPGYKVTK+RD+ + QRSLLFEVD PE E+GAQPRHRFMSAYEQKVEAPDK YQYLL AC+PYET+ FK+PN  +DK EGRFFTNWD   KKFTLQLYF +++
Sbjct:   17 MQIFLRGLNGISRVWNVEDGESVRRFCSRVALE--EGISDGDVILASSGRLILGKD---DTPISALGLGFGSALSLFPRGGLKGGIDFQHREGIKFGGGGAMSSQNEAIERRERLRKLAMETLDLAKDPYFMRNHLGTYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAALEARDAPIKPQAARVVPTRRTIKIGRPGYKVTKSRDVETKQRSLLFEVDCPEVEEGAQPRHRFMSAYEQKVEAPDKAYQYLLVACEPYETVAFKIPNQPLDKGEGRFFTNWDANNKKFTLQLYFREDA 311          
BLAST of mRNA_L-elsbetiae_contig10072.116.1 vs. uniprot
Match: A0A4D9D479_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D479_9STRA)

HSP 1 Score: 359 bits (922), Expect = 1.060e-113
Identity = 179/264 (67.80%), Postives = 209/264 (79.17%), Query Frame = 3
Query:  168 ECLTGVPADLQRLTAGVRDLGSSLSADRTLGDYGIEHGSTVRLSLRLRGGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAITVQTRNVIKIGRPGYKVTKARDLTSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAP-DKGYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWDKETKKFTLQLYFED 956
            ECL G+PA LQRLT G    G  L  D+TL D  I    T+ L L L GGIDFQHR+GS+FGGGG MSE  A  DRRERLRKLA ET+DLNKDPYFMRNHLG YECKLCLTLHNNEGNYLAHTQGKRHQ+NLARRAA EAK    +P     V  R ++KIGRPGYKVTKARDL++ QRSL+FE+DYP+AE+  QPRHRFMSA+EQ+VE+  ++ +QYLLFAC+PYETIGFK+PN++IDK EGRF + WD + +KF LQLYF +
Sbjct:   81 ECLGGIPAALQRLTLG----GRHLRDDQTLADCVINGCETLHLVLPLPGGIDFQHRDGSRFGGGGQMSESLANADRRERLRKLALETIDLNKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQENLARRAAREAKEQQYRPNKPTMVAARRMMKIGRPGYKVTKARDLSTRQRSLIFEIDYPQAEEDVQPRHRFMSAFEQRVESTKEREWQYLLFACEPYETIGFKIPNVEIDKGEGRFLSQWDPKARKFLLQLYFRE 340          
BLAST of mRNA_L-elsbetiae_contig10072.116.1 vs. uniprot
Match: A0A1W0A306_9STRA (Splicing factor 3A subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A306_9STRA)

HSP 1 Score: 333 bits (855), Expect = 9.240e-106
Identity = 174/299 (58.19%), Postives = 213/299 (71.24%), Query Frame = 3
Query:   72 MQIFVQGLGGGHFTVDVSSLGDRRVSTLRSAVECLTGVPADLQRLTAGVRDLGSSLSADRTLGDYGIEHGSTVRLSLRLRGGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAK--NALVKPQPAITVQTRNVIKIGRPGYKVTKARDLTSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWDKETKKFTLQLYFEDES 962
            M +FV+G+G     V V       V+ L+  V  L G+PA L  L      L   + A+  L DYGI HGST+   + L+GG+DFQ+R G+KFGGGGVMSE QA +DRRERLRKLA ETVDL+KDPY ++NHLG +ECKLCLTLH+NEGNYLAHTQGKRHQ NLARRAA +A   +A V P   + V     IKIG PGYKVTK RD  +  R LLF++ YP+  DG QPRHRFMSA+EQ+VE  DK +QYLLFAC+PYETI FK+PNL++DK +G+F+TNWDK  K FTL + F  E+
Sbjct:    1 MDVFVRGIGSKEIHVIVQETDS--VNGLKYQVSKLMGIPASLFNLAFNAHQL---IDANY-LSDYGIVHGSTLNALMSLKGGMDFQNRVGTKFGGGGVMSEQQANIDRRERLRKLALETVDLSKDPYILKNHLGTFECKLCLTLHSNEGNYLAHTQGKRHQTNLARRAAKDAAEASASVPPPQKLDVPKIRTIKIGLPGYKVTKQRDPDTGARMLLFQIFYPDIMDGYQPRHRFMSAFEQRVEVADKNFQYLLFACEPYETIAFKIPNLEVDKSDGKFYTNWDKSGKSFTLHVAFVPEN 293          
BLAST of mRNA_L-elsbetiae_contig10072.116.1 vs. uniprot
Match: F0YC33_AURAN (Matrin-type domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC33_AURAN)

HSP 1 Score: 327 bits (839), Expect = 3.040e-104
Identity = 159/216 (73.61%), Postives = 178/216 (82.41%), Query Frame = 3
Query:  327 QHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAITVQTRNVIKIGRPGYKVTKARDLTSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWDKETKKFTLQLYFEDESNAAP 974
            Q R  S+ GGGGV S  QA VDRRERLRKLA ETVDLNKDPYFMRNHLG YECKLCLTLHN EGNYLAHTQGKRHQQNLARRA  EA++A + P     V+ R+ IKIGRPGYKVTK+RD  ++QR LLFEVDYPEA+D +QPRHRFMSAYEQ+VE PDK YQYLLFAC+PYETIGFK+PN  +DK +GRFFTNWD   KKFTL L F+D++  AP
Sbjct:    4 QDRVNSRHGGGGVQSSEQANVDRRERLRKLALETVDLNKDPYFMRNHLGTYECKLCLTLHNTEGNYLAHTQGKRHQQNLARRAFKEARDAPIAPAATRYVEKRHTIKIGRPGYKVTKSRDAATSQRCLLFEVDYPEADDASQPRHRFMSAYEQRVEPPDKAYQYLLFACEPYETIGFKIPNHDVDKDQGRFFTNWDVVGKKFTLSLQFDDDAKPAP 219          
BLAST of mRNA_L-elsbetiae_contig10072.116.1 vs. uniprot
Match: K3XBD3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBD3_GLOUD)

HSP 1 Score: 329 bits (843), Expect = 1.310e-103
Identity = 179/324 (55.25%), Postives = 215/324 (66.36%), Query Frame = 3
Query:   72 MQIFVQGLGGGHFTVDVSSLGDRRVSTLRSAVECLTGVPADLQRLTAGVRDLGSSLSAD--RTLGDYGIEHGSTVRLSLRLRGGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNAL----------VKPQPAITVQTRNVIKIGRPGYKVTKARDLTSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWDKETKKFTLQLYF-----EDESNAAPPGR*PQ 992
            M +FV+       T+  +  G + V   + AV+  T VP +  +L        +SL AD    L DY I+HG+++ + L LRGGIDFQ+R GSK G GGV SE Q+ +DRRERLRKLA ETVDL KDPYFM+NHLG YECKLCLTLHNNEGNYLAHTQGKRHQ NLARRAA EA +A                         +KIG PGYKVTK RD  +  R LLF++ YP+ +   QPRHRFMSA+EQK+EAPDK +QYLLFAC+PYET+ FK+PNL+IDK EG+FF+NWDK  K FTLQLYF     E +   APP   PQ
Sbjct:    1 MDVFVRAPNNLLHTIRCA--GQQSVLEFKHAVQDATRVPLEAMKLR-----FATSLLADDGAMLSDYKIQHGASISIHLSLRGGIDFQNRAGSKPGAGGVASESQSNIDRRERLRKLALETVDLAKDPYFMKNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLARRAAKEASDAAHXXXXXXXXXXXXXXXXXXARPRALKIGLPGYKVTKQRDPDTGARILLFQIAYPDHDPKLQPRHRFMSAFEQKIEAPDKNFQYLLFACEPYETVAFKIPNLEIDKSEGKFFSNWDKNGKTFTLQLYFAVDSDEKKDQPAPPPPRPQ 317          
BLAST of mRNA_L-elsbetiae_contig10072.116.1 vs. uniprot
Match: A0A067CHK6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CHK6_SAPPC)

HSP 1 Score: 326 bits (836), Expect = 9.320e-103
Identity = 177/306 (57.84%), Postives = 214/306 (69.93%), Query Frame = 3
Query:   72 MQIFVQGLGGGHFTVDVSSLGDRRVSTLRSAVECLTGVPADLQRLTAGVRDLGSSLSADRTLGDYGIEHGSTVRLSLRLRGGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQ--PAITVQTRNVIKIGRPGYKVTKARDLTSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWDKETKKFTLQLYFEDESNAA--PP 977
            M +FV+GLG     V V+   D  ++ +++ V  L GVP  L +L+   R     L     + DY I HGST+  S+ L+GG+DFQ+R GSK G GGV SE QA +DRRERLRKLA ETVDL+KDPY ++NHLG +ECKLCLTLH+NEGNYLAHTQGKRHQ NLARRAA +A  A    Q  P   +Q    IKIG PGYKVTK RD  +  R LLF++ YP+  DG QPRHRFMSA+EQ+VE  DK +QYLLFAC+PYETI FKVPNL +DK EG+FFTNWDK  K FTL + F  E+ A+  PP
Sbjct:    1 MDLFVRGLGPKELHV-VAQATDS-IAAVKAHVSGLMGVPVALFKLSFNAR----LLVETNFVHDYCITHGSTLAASMALKGGMDFQNRVGSKPGSGGVASEQQANIDRRERLRKLALETVDLSKDPYILKNHLGTFECKLCLTLHSNEGNYLAHTQGKRHQTNLARRAAKDAAEASANVQAPPKPEIQRIRTIKIGLPGYKVTKQRDPDTGARMLLFQIFYPDVMDGLQPRHRFMSAFEQRVEVADKNFQYLLFACEPYETIAFKVPNLDVDKSEGKFFTNWDKLGKSFTLHVTFMPEAPASTQPP 300          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10072.116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTA0_ECTSI1.190e-19292.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLB9_9PHAE8.290e-13887.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YVT4_9STRA1.110e-13570.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2B1N4_9STRA6.980e-11967.62Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3XZJ6_HETAK2.780e-11764.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9D479_9STRA1.060e-11367.80Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A1W0A306_9STRA9.240e-10658.19Splicing factor 3A subunit n=1 Tax=Thraustotheca c... [more]
F0YC33_AURAN3.040e-10473.61Matrin-type domain-containing protein n=1 Tax=Aure... [more]
K3XBD3_GLOUD1.310e-10355.25Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A067CHK6_SAPPC9.320e-10357.84Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10072contigL-elsbetiae_contig10072:2697..6419 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score560.1
Seed ortholog evalue6.5e-157
Seed eggNOG ortholog2880.D8LTA0
Preferred namesap62
KEGG koko:K12826
KEGG Pathwayko03040,map03040
KEGG ModuleM00352
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005686,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0010720,GO:0010975,GO:0010976,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030532,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046483,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0060284,GO:0065003,GO:0065007,GO:0070013,GO:0071004,GO:0071010,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0120035,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1990904,GO:2000026
EggNOG free text desc.spliceosomal complex assembly
EggNOG OGsCOG5246@1,KOG0227@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Ec32 ortholog descriptionUbiquitin-like
Ec32 orthologEc-12_005780.1
Exons4
Model size2187
Cds size915
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10072.116.1prot_L-elsbetiae_contig10072.116.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10072 3898..6348 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815239.546096-UTR-L-elsbetiae_contig10072:2696..38971622815239.546096-UTR-L-elsbetiae_contig10072:2696..3897Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10072 2697..3897 -
1691682789.5893433-UTR-L-elsbetiae_contig10072:2696..38971691682789.5893433-UTR-L-elsbetiae_contig10072:2696..3897Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10072 2697..3897 -
1622815239.6068392-UTR-L-elsbetiae_contig10072:6348..64191622815239.6068392-UTR-L-elsbetiae_contig10072:6348..6419Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10072 6349..6419 -
1691682789.6396823-UTR-L-elsbetiae_contig10072:6348..64191691682789.6396823-UTR-L-elsbetiae_contig10072:6348..6419Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10072 6349..6419 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815239.5629816-CDS-L-elsbetiae_contig10072:3897..39481622815239.5629816-CDS-L-elsbetiae_contig10072:3897..3948Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10072 3898..3948 -
1691682789.6061122-CDS-L-elsbetiae_contig10072:3897..39481691682789.6061122-CDS-L-elsbetiae_contig10072:3897..3948Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10072 3898..3948 -
1622815239.5737846-CDS-L-elsbetiae_contig10072:4400..45201622815239.5737846-CDS-L-elsbetiae_contig10072:4400..4520Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10072 4401..4520 -
1691682789.6150713-CDS-L-elsbetiae_contig10072:4400..45201691682789.6150713-CDS-L-elsbetiae_contig10072:4400..4520Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10072 4401..4520 -
1622815239.5845993-CDS-L-elsbetiae_contig10072:5060..52621622815239.5845993-CDS-L-elsbetiae_contig10072:5060..5262Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10072 5061..5262 -
1691682789.623105-CDS-L-elsbetiae_contig10072:5060..52621691682789.623105-CDS-L-elsbetiae_contig10072:5060..5262Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10072 5061..5262 -
1622815239.595761-CDS-L-elsbetiae_contig10072:5806..63481622815239.595761-CDS-L-elsbetiae_contig10072:5806..6348Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10072 5807..6348 -
1691682789.6312761-CDS-L-elsbetiae_contig10072:5806..63481691682789.6312761-CDS-L-elsbetiae_contig10072:5806..6348Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10072 5807..6348 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10072.116.1

>prot_L-elsbetiae_contig10072.116.1 ID=prot_L-elsbetiae_contig10072.116.1|Name=mRNA_L-elsbetiae_contig10072.116.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=305bp
MQIFVQGLGGGHFTVDVSSLGDRRVSTLRSAVECLTGVPADLQRLTAGVR
DLGSSLSADRTLGDYGIEHGSTVRLSLRLRGGIDFQHREGSKFGGGGVMS
EGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGN
YLAHTQGKRHQQNLARRAAMEAKNALVKPQPAITVQTRNVIKIGRPGYKV
TKARDLTSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQYL
LFACDPYETIGFKVPNLKIDKQEGRFFTNWDKETKKFTLQLYFEDESNAA
PPGR*
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mRNA from alignment at L-elsbetiae_contig10072:2697..6419-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10072.116.1 ID=mRNA_L-elsbetiae_contig10072.116.1|Name=mRNA_L-elsbetiae_contig10072.116.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3723bp|location=Sequence derived from alignment at L-elsbetiae_contig10072:2697..6419- (Laminarionema elsbetiae ELsaHSoW15)
GTGTGTAGCAGGTGTGTGGTAAGCCCCGACTTGGGTTCGATAATAAGCCA GCGCTGCAGTAATACAGTGCGATGCAGATCTTCGTGCAAGGCTTGGGCGG CGGCCACTTCACAGTGGACGTCAGCTCGCTGGGCGACCGGCGAGTATCGA CACTGAGATCGGCGGTAGAGTGCCTAACTGGCGTGCCAGCCGACCTCCAG CGGCTCACCGCGGGGGTCAGAGACCTCGGCTCGTCCCTCAGCGCCGACCG TACTTTAGGCGACTATGGTATCGAGCACGGCAGCACGGTGCGGCTGTCCC TGCGACTCCGCGGAGGTATTGACTTCCAGCACCGGGAGGGATCCAAGTTC GGCGGCGGCGGGGTCATGTCCGAGGGCCAGGCGGCCGTGGACCGGAGGGA GAGGTTGAGAAAGCTCGCTCAGGAGACCGTGGACCTGAACAAGGACCCGT ACTTCATGCGCAACCACCTGGGCAAGTATGAGTGCAAGCTGTGCCTCACC CTGCACAACAACGAGGGCAACTACCTGGCGCACACCCAGGGCAAGCGGCA CCAGCAGAACCTCGCGAGGCGGGCGGCGATGGAGGCGAAGAACGCCCTGG TGAAACCGCAACCGTAAGTACCCAGCGACTTGTGTTTTCCGCATGTAGGC TACAACCTGTACTTATAGTCGAGAGTTGGTTGTACCCACATACCCTAGCA GTACAGCAGCTCGCCTGTGTCCGAAAGTTAAAAAGTCTTATCTAGCTTAT GGTGTGTGTCCTTCTTGAGAATTGATGCCACCACCGTGCGATTGTCCGGC CTGGAGGGTGTACAATAATTTCTAACGTTTCACAGTCAGTATCCCTGCCG GCCTATCTGCTGACCTGCCTCAAGACGCGTGAGCCATGAGTGACAGCTCG ATTCCTTATCCACGACACCCGCGCTGACTAAAATAACCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCGCCCGGCGCGCCCAAAA CCTGGCCCCCCCCCCCAAACACCACGCAAGGGGGGGGCGCCCCCCCNNNN NNNNNNCCCCCCCCCAGCCGCGGGGGCCATGAGTGCCCGCCCGATTCCTT ACCCACCACCCCCCCGCTGACTAAAAAACCCCCCCCCCCCCCCCCAACAC CCCGCAGAGCCATCACGGTGCAGACGCGGAACGTCATCAAGATTGGCCGC CCAGGATACAAGGTCACGAAGGCGAGGGACCTCACGAGCAACCAGCGCAG CCTGTTGTTCGAGGTGGACTACCCGGAGGCCGAGGACGGCGCGCAGCCGC GACACCGCTTCATGTCAGCTTACGAGCAAAAGGTCGAGGCTCCGGATAAG GGCTATCAGGTAAATAAATATGCGAGCGAGCGAGCGAGAGAGAGATCGCA AGACGGGGATGGAGGGAGGAAGGCAGGAGGCGCCGAAGAAGATAGTGCGC AGCGGGTTTTGGAAGCCTCTTTATCGTGCCGGTTTGCAGAGTTCCTCTGT GAGGTGGAACTCGAACCGACCGAACCCACATGATTCTTGTTCCAAGAGTT TGTTTTTCACGTTGTGTTGCGCGTTTTGGCGCTTTGCGATAGTAGAGATG GGGGTATTGTAAGCAGATCGGCTCTGACCGTGTACATACGTACTGCTCTG GTTCCCAGCGGTTCTATGACTCAGGACGCAAACAGCAGTACCAGTTGTAC ACCATCGGTTGTGATCCGGTCCGGCCTGCCCGAGTTTGGGATAACCCAAA AACGCACCTTTGAGGGTGGGAGTTGCAGTATCATCGTGTTTGCGCTTTCT GTTTTTATTTATTTTTTGTGTTGCTGCGCCCGCCGCTCGCACACCAACCA ACCAACCGTTCCATGTGTGTGCAAAAAATCGCGGCGTCGCTCCGTGCAGT ACCTGCTGTTCGCGTGCGACCCGTACGAGACGATCGGCTTCAAGGTGCCG AACCTCAAGATCGACAAACAAGAGGGCCGCTTCTTTACCAACTGGGACAA GGAAACCAAGAAGTTCACGGTGAGACAGACGTGTGCAGGGCACAGGTGTT GAGAGCAAACAGTCAACCCACTGCTGTCCCCGTCTCCTGCCTGCCTGCCT GCCTGCCAGGTGCTCTTCTTGGCCCTATGCAACCCTCCGCGTGTTGTGTG CCGTAAGAGTTTTGAGCATCTATGTAGGGTGTGGATCGCCTTGTTGTTCG TTCGCTTGCTTGCTTGCCTGCCTGCCTGCCTGCTTGCCTGCTGTGTGTGC AGCATTGTGACGTTTTCTTTGACGAGACCCTAAGCTGTTGATGTCCCGCT CATAGCAGCATCTCCGCATTTTAAACTCTTGTCCCTGCCTGGGGGCGCTT TGGTATCATGATCGCGTATGTACCTCTGTGCGTGCAGACCAAACACCTGT TGGCTGTGTAACTTACTACTCGTATTACCCGCGTTTTTCTCTCTCGCCGT TCTCCTACCTTTTTCTGGCAGCTCCAATTGTACTTCGAGGACGAGTCCAA TGCCGCACCACCGGGACGCTGACCCCAGCACATGGAGCAAAAATTGCAAG GTCGAGATTTTTTTTGTTGCTTTTTTGTTTTCGTGGGTTGTCGAGAAAAA CAGACAGTAGCCGCGTTTAATCAACAAAGCAGCGTCCGCGCCGGGCGAGA CAGGACAGGTTCCCGCTTCAATTCAAGGCAAGGGCGCCCCATCGGCGTCA AGAGGCATCCAGATCCAGCTCGCGTGCAGCTCGGACGGCAGGCGGAGGTT TCCCCTCCGCGCCTGGGGAGGAGGAGCCACCATAACCGGGAGATAAACCG GGGTTCGGTCTACAAGGCACTTTCGGGGCTCCGTCATGCGCTTCTTGTAC CGGAGCGCGAAAGCACGCTTCTTTGTCGTTCCAGGAGAAACTTTAAATTT TACACTTTAATTGATTTCCCGATTCTGATTTTTCCTCCTCCTCGGGTTCT CGTCCCCAAAGCTATCTATCTGAACACGAGTGCTTTGGATGTTTTGTTTC TGTTTTGAGAGCGACGTGTGTTGTGTTTTTGGCGGTGACAGCAGTCAGTA CTTCGGCGTCCCGAGTCTTGAGTGCAGAAGTAGCTTAAAAGACACTTCGG TATTCGCATTGTTCTTATCGGTAAGACTTGGTGCGGGGGGAGGGATAAGA GGCGGGTGTGTTGCGCAATCAGTGCAGGGTCGAGATTGCGGAAGTAGCCC GTTTGGCGGGGCAAACAGACTCAAGCCTCTCCTGTTCTCTTCCCTCCGTG TTAGTACAATATTGTAGATACCTTGTACTCAAGACTTTTTTCGTCCTTCA GTTTAAGGCAGAAAGGAGCAAGTTTCGTGTTTTTCTGCGATTCCTGTTCT TTTGAGAATGCACGTGCCGAGGCTGGGGACATCGACCGGGCCCCTCTGTT TTCCGTCCTGGCGGGGCCGCTGGGCTTGATGCGGTTTAGCGTCAACTCTC TATGCAGTTTTTTGCACAGCGGATTGCTCGTCTACCTACATAGAACAGCA GTAGGATCGTTGATGCGCTGGTGAGACCGATGTCCTCCATGCGGAGGCTG CTCTTTGGAAGGGATTCGACTCCGCCGTCTCAGGCGTTTTCCTGATCCGC TTGCTCAGGGCAGTCATTGGAGTGCCGTCTCGTAAGTCGCCAAACGTCTT GCGCACTCGTTTACGAGCGAAAACCCCGAATCAAGGATAGATTTCCCAGC AGCGACGGATAACTACCCGAGGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10072:2697..6419-

>mRNA_L-elsbetiae_contig10072.116.1 ID=mRNA_L-elsbetiae_contig10072.116.1|Name=mRNA_L-elsbetiae_contig10072.116.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1830bp|location=Sequence derived from alignment at L-elsbetiae_contig10072:2697..6419- (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGATCTTCGTGCAAGGCTTGGGCGGCGGCCACTTCACAGTGGACGT
CAGCTCGCTGGGCGACCGGCGAGTATCGACACTGAGATCGGCGGTAGAGT
GCCTAACTGGCGTGCCAGCCGACCTCCAGCGGCTCACCGCGGGGGTCAGA
GACCTCGGCTCGTCCCTCAGCGCCGACCGTACTTTAGGCGACTATGGTAT
CGAGCACGGCAGCACGGTGCGGCTGTCCCTGCGACTCCGCGGAGGTATTG
ACTTCCAGCACCGGGAGGGATCCAAGTTCGGCGGCGGCGGGGTCATGTCC
GAGGGCCAGGCGGCCGTGGACCGGAGGGAGAGGTTGAGAAAGCTCGCTCA
GGAGACCGTGGACCTGAACAAGGACCCGTACTTCATGCGCAACCACCTGG
GCAAGTATGAGTGCAAGCTGTGCCTCACCCTGCACAACAACGAGGGCAAC
TACCTGGCGCACACCCAGGGCAAGCGGCACCAGCAGAACCTCGCGAGGCG
GGCGGCGATGGAGGCGAAGAACGCCCTGGTGAAACCGCAACCATGCAGAT
CTTCGTGCAAGGCTTGGGCGGCGGCCACTTCACAGTGGACGTCAGCTCGC
TGGGCGACCGGCGAGTATCGACACTGAGATCGGCGGTAGAGTGCCTAACT
GGCGTGCCAGCCGACCTCCAGCGGCTCACCGCGGGGGTCAGAGACCTCGG
CTCGTCCCTCAGCGCCGACCGTACTTTAGGCGACTATGGTATCGAGCACG
GCAGCACGGTGCGGCTGTCCCTGCGACTCCGCGGAGGTATTGACTTCCAG
CACCGGGAGGGATCCAAGTTCGGCGGCGGCGGGGTCATGTCCGAGGGCCA
GGCGGCCGTGGACCGGAGGGAGAGGTTGAGAAAGCTCGCTCAGGAGACCG
TGGACCTGAACAAGGACCCGTACTTCATGCGCAACCACCTGGGCAAGTAT
GAGTGCAAGCTGTGCCTCACCCTGCACAACAACGAGGGCAACTACCTGGC
GCACACCCAGGGCAAGCGGCACCAGCAGAACCTCGCGAGGCGGGCGGCGA
TGGAGGCGAAGAACGCCCTGGTGAAACCGCAACCAGCCATCACGGTGCAG
ACGCGGAACGTCATCAAGATTGGCCGCCCAGGATACAAGGTCACGAAGGC
GAGGGACCTCACGAGCAACCAGCGCAGCCTGTTGTTCGAGGTGGACTACC
CGGAGGCCGAGGACGGCGCGCAGCCGCGACACCGCTTCATGTCAGCTTAC
GAGCAAAAGGTCGAGGCTCCGGATAAGGGCTATCAGAGCCATCACGGTGC
AGACGCGGAACGTCATCAAGATTGGCCGCCCAGGATACAAGGTCACGAAG
GCGAGGGACCTCACGAGCAACCAGCGCAGCCTGTTGTTCGAGGTGGACTA
CCCGGAGGCCGAGGACGGCGCGCAGCCGCGACACCGCTTCATGTCAGCTT
ACGAGCAAAAGGTCGAGGCTCCGGATAAGGGCTATCAGTACCTGCTGTTC
GCGTGCGACCCGTACGAGACGATCGGCTTCAAGGTGCCGAACCTCAAGAT
CGACAAACAAGAGGGCCGCTTCTTTACCAACTGGGACAAGGAAACCAAGA
AGTTCACGTACCTGCTGTTCGCGTGCGACCCGTACGAGACGATCGGCTTC
AAGGTGCCGAACCTCAAGATCGACAAACAAGAGGGCCGCTTCTTTACCAA
CTGGGACAAGGAAACCAAGAAGTTCACGCTCCAATTGTACTTCGAGGACG
AGTCCAATGCCGCACCACCGGGACGCTGACTCCAATTGTACTTCGAGGAC
GAGTCCAATGCCGCACCACCGGGACGCTGA
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