mRNA_L-elsbetiae_contig10070.115.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10070.115.1 vs. uniprot
Match: D7FTN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN5_ECTSI) HSP 1 Score: 329 bits (843), Expect = 3.950e-105 Identity = 192/254 (75.59%), Postives = 201/254 (79.13%), Query Frame = 1 Query: 1 RGWFYHKAVWLKLPGGKKVVLTARVHKPLFGQAEGELVLLEMPRVDGPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDSTVQVICAEFLGGRVTMHSLWGGGSLPGSRPSVTELWVLDDNAGPAYSITAADLRGGSPAGRPTHFLVTKHESSYSTYSFFAGXXXXXXXXXXXXXXXXXXXXXXDARLPAAXXXXXXXADMRAPGPGPPGPAVDARGKSSGSGRGGSAVPKRRGRWGGVVAGGPKEQRWQRREEG 762 RGWFYHKAVW+ LPGGKKVVLTARVHKP+FGQAEGELVLLEMPRVD PLSEQNLPWREKVLVTGPDVMFEVVDLD EDSTVQVICAEF GGRVTMHSLWGGG LPGS+PSVTE WVLDDNAGPAYSITAADLRGGSP GRPTHFLVT HESSY+TYS FA XXXXXXXXXXXXXXXX XXX A + G + G+ R G+ GRWGGVVAGGPKE+RWQRREEG Sbjct: 408 RGWFYHKAVWVVLPGGKKVVLTARVHKPIFGQAEGELVLLEMPRVDSPLSEQNLPWREKVLVTGPDVMFEVVDLDREDSTVQVICAEFFGGRVTMHSLWGGGQLPGSQPSVTESWVLDDNAGPAYSITAADLRGGSPGGRPTHFLVTVHESSYNTYSLFAAAGGIGGXXXXXXXXXXXXXXXXXXXXXXXXXXGSRHAGVEPDPAGIEAEKAAFKVPPEGTSRWGA------GRWGGVVAGGPKERRWQRREEG 655
BLAST of mRNA_L-elsbetiae_contig10070.115.1 vs. uniprot
Match: A0A6H5KJ55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ55_9PHAE) HSP 1 Score: 331 bits (848), Expect = 5.090e-102 Identity = 189/254 (74.41%), Postives = 196/254 (77.17%), Query Frame = 1 Query: 1 RGWFYHKAVWLKLPGGKKVVLTARVHKPLFGQAEGELVLLEMPRVDGPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDSTVQVICAEFLGGRVTMHSLWGGGSLPGSRPSVTELWVLDDNAGPAYSITAADLRGGSPAGRPTHFLVTKHESSYSTYSFFAGXXXXXXXXXXXXXXXXXXXXXXDARLPAAXXXXXXXADMRAPGPGPPGPAVDARGKSSGSGRGGSAVPKRRGRWGGVVAGGPKEQRWQRREEG 762 RGWFYHKAVW+ LPGGKKVVLTARVHKP+FGQAEGELVLLEMPRVD PLSEQNLPWREKVLVTGPDVMFEVVDLD EDSTVQVICAEF GGRVTMHSLWGGG LPGS+PSVTE WVLDDNAGPAYSITAADLRGGSP GRPTHFLVT HESSY+TYS FAG XXXXXXXXXXX X XX A + G R S G+ R GRWGGVVAGGPKE+RWQRREEG Sbjct: 750 RGWFYHKAVWVVLPGGKKVVLTARVHKPIFGQAEGELVLLEMPRVDHPLSEQNLPWREKVLVTGPDVMFEVVDLDREDSTVQVICAEFFGGRVTMHSLWGGGQLPGSQPSVTESWVLDDNAGPAYSITAADLRGGSPGGRPTHFLVTVHESSYNTYSLFAGAGGIGXXXXXXXXXXXNFNPAXXXXXXXXXXAGSRHAGVEPDPAGIEAEKAAFRVPSEGTSR------WEAGRWGGVVAGGPKERRWQRREEG 997
BLAST of mRNA_L-elsbetiae_contig10070.115.1 vs. uniprot
Match: A0A836CJ47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ47_9STRA) HSP 1 Score: 177 bits (450), Expect = 2.060e-49 Identity = 86/153 (56.21%), Postives = 102/153 (66.67%), Query Frame = 1 Query: 1 RGWFYHKAVWLKLPGGKKVVLTARVHKPLFGQAEGELVLLEMPRVDGPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDSTVQVICAEFLGGRVTMHSLWGGGSLPGSRPSVTELWVLDDNAGPAYSITAADLRGGSPAGRPTHFLVTKHESSY 459 +GWFYHKAVW+ +P G++ VL AR KPLFG GELVL +MP V PL+ LPWRE VL GPDVMF +VDLD D TV+V AEF R+TMHS+ G + G++ V + WVLD N GPAYS+ AADL G PTH LVT HE Y Sbjct: 62 KGWFYHKAVWVNMPDGRRGVLAARATKPLFGGGRGELVLFDMPSVAQPLAAYALPWRETVLANGPDVMFHLVDLDDADGTVEVFAAEFFARRLTMHSVRWGDARRGTQSQVVQSWVLDSNCGPAYSVVAADLLGTGLG--PTHLLVTSHECLY 212
BLAST of mRNA_L-elsbetiae_contig10070.115.1 vs. uniprot
Match: A0A4D9DCX2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCX2_9STRA) HSP 1 Score: 160 bits (406), Expect = 2.670e-41 Identity = 81/154 (52.60%), Postives = 97/154 (62.99%), Query Frame = 1 Query: 4 GWFYHKAVWLKL--PGGKKVVLTARVHKPLFGQAEGELVLLEMPRVDGPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDSTVQVICAEFLGGRVTMHSLWGGGSLPGSRPSVTELWVLDDNAGPAYSITAADLRGGSPAGRPTHFLVTKHESSY 459 GWFYHKA W+ L PGG+ +LTAR KP F Q EGELVLL P PL+E N PW+E VL GPDVMF+V DLDP D ++V +EF R+++H + G G P V VLDD GPAYS+ ADLRG GRP+H LV+ HE Y Sbjct: 546 GWFYHKATWVDLLGPGGRPCLLTARATKPFFAQTEGELVLLLQPEGPFPLAEWNTPWQEVVLAKGPDVMFDVADLDPTDDVLEVFASEFFSRRLSLHRIIKGDWRTGRLPRVLTSEVLDDALGPAYSVVLADLRG---QGRPSHVLVSSHECQY 696
BLAST of mRNA_L-elsbetiae_contig10070.115.1 vs. uniprot
Match: A0A7S4DAE7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAE7_HETAK) HSP 1 Score: 159 bits (402), Expect = 2.890e-41 Identity = 81/165 (49.09%), Postives = 105/165 (63.64%), Query Frame = 1 Query: 4 GWFYHKAVWLKL-PGGKKVVLTARVHKPLFGQAEGELVLLEMPRVDGPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDSTVQVICAEFLGGRVTMHSL-----WGGGSLPGSRPSVTELWVLDDNAGPAYSITAADLRGGSPAGRPTHFLVTKHESSYSTYSFFA 480 G+FYHKAVW+ L G+K +LTAR KPL GQAEGELV E P V PL+ PW+E V+ TGPDVMFEV+D+DP+D +++++ AEF R+T+ SL W G + + V + V+D GPAY +TAA+LR G P PTH LVT H Y S F+ Sbjct: 212 GFFYHKAVWVDLFQTGQKGILTARAKKPLLGQAEGELVFFEQPLVRDPLASFCTPWKETVITTGPDVMFEVIDIDPDDDSIEIVAAEFFNERLTLTSLAPRRDWLGPN----KIQVKQKMVIDAGCGPAYGVTAANLRTGRPGDPPTHLLVTSHACQYDPASDFS 372
BLAST of mRNA_L-elsbetiae_contig10070.115.1 vs. uniprot
Match: L1JIM1_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JIM1_GUITC) HSP 1 Score: 139 bits (350), Expect = 7.740e-34 Identity = 77/152 (50.66%), Postives = 95/152 (62.50%), Query Frame = 1 Query: 1 RGWFYHKAVWLKLPGGKKVVLTARVHKPL--FGQAEGELVLLEMPRVDGPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDSTVQVICAEFLGGRVTMHSLWGGGSLPGSRPSVTELWVLDDNAGPAYSITAADLRGGSPAGRPTHFLVTKHE 450 + WFYH+AV L G + VLTAR KP+ F +AEGELV LE P P +E NLPWRE +L GPDVMFEVVDLDPED TV+V+ AEF R++ SL + P V + ++DD G AYS+ AADL G + +H LVT HE Sbjct: 277 KSWFYHRAVPLHF-GSARGVLTARARKPILPFQEAEGELVWLEQPDTVNPFAEWNLPWREVILAEGPDVMFEVVDLDPEDDTVEVVAAEFFRQRLSFFSLRWDETC--KSPKVVQTELIDDKLGQAYSVVAADLEGPN-----SHLLVTTHE 420
BLAST of mRNA_L-elsbetiae_contig10070.115.1 vs. uniprot
Match: A0A7S4CRI4_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CRI4_9EUGL) HSP 1 Score: 123 bits (308), Expect = 3.430e-29 Identity = 67/146 (45.89%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 46 GKKVVLTARVHKPL--FGQAEGELVLLEMPRVDGPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDSTVQVICAEFLGGRVTMHSL-WGGGSLPGSRPSVTELWVLDDNAGPAYSITAADLRGGSPAGRPTHFLVTKHESSYSTYSF 474 G++ +LTAR +KPL F +A GELV LE P P E + PW+E VLVTGPDVMF+VVDLDP D TV+V +EF R+T+H + W S P V + V+D+ GPAY + ADL G +H LVT H+ Y + Sbjct: 1 GREGILTARANKPLVPFTKALGELVWLERPNTLAPFREWSAPWKEHVLVTGPDVMFDVVDLDPNDETVEVFASEFFAERLTLHRIAWSRAS---DAPFVVDTQVIDNGLGPAYGVVVADLTGPR-----SHVLVTTHKYGMDYYYY 138
BLAST of mRNA_L-elsbetiae_contig10070.115.1 vs. uniprot
Match: A0A7S1DNQ2_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DNQ2_HEMAN) HSP 1 Score: 110 bits (274), Expect = 5.100e-24 Identity = 70/152 (46.05%), Postives = 85/152 (55.92%), Query Frame = 1 Query: 10 FYHKAVWLKLPGGKKVVLTARVHKPL--FGQAEGELVLLEMPRVDGPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDSTVQVICAEFLGGRVTMHS-LWGGGSLPGSRPSVTELWVLDDNAGPAYSITAADLRGGSPAGRPTHFLVTKHESS 456 FYHKAV + G + V LTAR PL + + GELV LE P P + + PWRE VL GPDVMF+V DLD D+TVQV AEF R+TM S LW + RP V + VLD G AYS+ L G + +H LVT HE + Sbjct: 209 FYHKAVPCSIDGHEGV-LTARARLPLVPWMKGVGELVWLEKPDTLQPTAPWSTPWREIVLAEGPDVMFDVADLDEGDTTVQVFAAEFFARRLTMFSILWDADA---GRPRVVQREVLDSQLGQAYSVQVLSLDGPN-----SHLLVTTHEDT 351
BLAST of mRNA_L-elsbetiae_contig10070.115.1 vs. uniprot
Match: A0A7S1G010_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G010_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.170e-23 Identity = 73/203 (35.96%), Postives = 94/203 (46.31%), Query Frame = 1 Query: 7 WFYHKAVWLKLPG-GKKVVLTARVHKPLFGQAE-------------GELVLLEMPRV-------------DG----PLSEQNLPWREKVLVTGPDVMFEVVDLDPEDSTVQVICAEFLGGRVTMHSLWGGGSLPGSRPSVTELWVLDDNAGPAYSITAADLR---------------------GGS---PAGRPTHFLVTKHE 450 WFYHKAVW+ L G G+ +LTAR +P ++ G+LV LE PR DG P +++PW+E++L GPDVMF V DLDP D T+ +I A+F G +VT HSL G RP V V+DD+ G +Y I +L GG P TH LVT HE Sbjct: 213 WFYHKAVWIDLTGDGRWSILTARARRPDISFSDDGIPQEDPAVLPSGQLVWLERPRPHHRDKLTGELRDEDGTLFDPFGPRHVPWKERILDEGPDVMFAVADLDPTDDTIDIIAAQFFGKKVTCHSLRRG-----PRPEVISRHVIDDDCGASYGILLVNLSEKDDKDKTHVPSAPLVVAPGTGGDILRPGDTFTHVLVTSHE 410
BLAST of mRNA_L-elsbetiae_contig10070.115.1 vs. uniprot
Match: A0A7S0E016_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E016_9CRYP) HSP 1 Score: 103 bits (257), Expect = 1.100e-22 Identity = 55/111 (49.55%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 118 LEMPRVDGPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDSTVQVICAEFLGGRVTMHSLWGGGSLPGSRPSVTELWVLDDNAGPAYSITAADLRGGSPAGRPTHFLVTKHE 450 LE P P +E +LPWRE VL GPDVMFEV+DLDPED TV+V+ AEF R++ S+ S P V + V+DD+ G AYS+ AADL G + +H LVT HE Sbjct: 1 LEQPDTANPFAEWSLPWREVVLAQGPDVMFEVLDLDPEDETVEVVAAEFFRQRLSFFSIKWDESC--KSPRVVQAEVIDDSLGQAYSVVAADLEGPN-----SHLLVTTHE 104 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10070.115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10070.115.1 >prot_L-elsbetiae_contig10070.115.1 ID=prot_L-elsbetiae_contig10070.115.1|Name=mRNA_L-elsbetiae_contig10070.115.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=254bp RGWFYHKAVWLKLPGGKKVVLTARVHKPLFGQAEGELVLLEMPRVDGPLSback to top mRNA from alignment at L-elsbetiae_contig10070:4458..7242- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10070.115.1 ID=mRNA_L-elsbetiae_contig10070.115.1|Name=mRNA_L-elsbetiae_contig10070.115.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2785bp|location=Sequence derived from alignment at L-elsbetiae_contig10070:4458..7242- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10070:4458..7242- >mRNA_L-elsbetiae_contig10070.115.1 ID=mRNA_L-elsbetiae_contig10070.115.1|Name=mRNA_L-elsbetiae_contig10070.115.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1524bp|location=Sequence derived from alignment at L-elsbetiae_contig10070:4458..7242- (Laminarionema elsbetiae ELsaHSoW15)back to top |