mRNA_L-elsbetiae_contig10031.81.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10031.81.1 vs. uniprot
Match: D7FJ72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ72_ECTSI) HSP 1 Score: 291 bits (744), Expect = 4.610e-93 Identity = 143/163 (87.73%), Postives = 149/163 (91.41%), Query Frame = 1 Query: 52 MSGFCNLSGDSKMEEPAIRQGVYVTAGYVLVFYACVIGQASAKHRVASSYRARGERFERYYNVTDKAMLAWDRVVGNLLEQAMPFLTLFWLNIGLAALGATSYESVAAAGWIYVVFRALYPVAWLSGGGGRAGPRIKILLVTPVMYLVVIYLFANMLWAVRSR 540 MSGFCNLSG MEEPAIRQGVYVTA YVLVFYAC+IGQASAK +VA+SYRARGERFERYYNV DKAMLAWDR+VGNLLEQAMPFLTLFWLNIGLAALGATS+ VA AGWIYVVFRALYPV WLSGGGGRAGPR KIL VTPVMYLV+IYL NMLWAVRSR Sbjct: 109 MSGFCNLSGPVTMEEPAIRQGVYVTAAYVLVFYACIIGQASAKWKVAASYRARGERFERYYNVKDKAMLAWDRIVGNLLEQAMPFLTLFWLNIGLAALGATSHTGVAIAGWIYVVFRALYPVMWLSGGGGRAGPRSKILFVTPVMYLVIIYLVGNMLWAVRSR 271
BLAST of mRNA_L-elsbetiae_contig10031.81.1 vs. uniprot
Match: A0A6H5JQ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ30_9PHAE) HSP 1 Score: 246 bits (629), Expect = 1.380e-77 Identity = 123/145 (84.83%), Postives = 129/145 (88.97%), Query Frame = 1 Query: 52 MSGFCNLSGDSKMEEPAIRQGVYVTAGYVLVFYACVIGQASAKHRVASSYRARGERFERYYNVTDKAMLAWDRVVGNLLEQAMPFLTLFWLNIGLAALGATSYESVAAAGWIYVVFRALYPVAWLSGGGGRAGPRIKILLVTPVM 486 MS F LSG MEEPAIRQGVY+TA YVLVFYAC+IGQASA +VA+SYRARGERFERYYNV DKAMLAWDR+VGNLLEQAMPFLTLFWLNIGLAALGATS+ VA AGWIYVVFRALYPV WLSGGGGRAGPR KIL VTPVM Sbjct: 1 MSDFGKLSGPVTMEEPAIRQGVYITAVYVLVFYACIIGQASAMWKVAASYRARGERFERYYNVKDKAMLAWDRIVGNLLEQAMPFLTLFWLNIGLAALGATSHTGVAIAGWIYVVFRALYPVMWLSGGGGRAGPRSKILFVTPVM 145
BLAST of mRNA_L-elsbetiae_contig10031.81.1 vs. uniprot
Match: A0A5J4YNY0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNY0_PORPP) HSP 1 Score: 83.6 bits (205), Expect = 1.910e-15 Identity = 49/147 (33.33%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 94 EPAIRQGVYVTAGYVLVFYACVIGQASAKHRVASSYRARGERFERY-YNVTDKAMLAWDRVVGNLLEQAMPFLTLFWLNIGL--AALGATSYESVAAAGWIYVVFRALYPVAWLSGGG-GRAGPRIKILLVTPVMYLVVIYLFANML 522 E + G VT +V+ F ++ Q S K + R + + F RY D+A+L DRVV N+ E ++PFL+LFWLN+ L A A + + AGW++ V R +Y GG G +GP+ ++ + T YL ++YL ++ Sbjct: 2 ERIVHAGARVTVLHVVAFIFAIVVQTSLKFSAQRAARNQQKPFVRYSVQAQDRALLVADRVVANVTEWSVPFLSLFWLNLALVSATHSAGDGQHIVTAGWVFAVARVVYVFLCNFGGALGTSGPKPRVFIATAPGYLALLYLLVRLI 148
BLAST of mRNA_L-elsbetiae_contig10031.81.1 vs. uniprot
Match: A0A2E6VNJ6_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E6VNJ6_9DELT) HSP 1 Score: 83.2 bits (204), Expect = 2.190e-15 Identity = 56/145 (38.62%), Postives = 84/145 (57.93%), Query Frame = 1 Query: 115 VYVTAGYVLVFYACVIGQASAKHRVASSYRARGERFERYYNVTDKAMLAWDRVVGNLLEQAMPFLTLFWLNIGLAALGATSYESVAAAGWIYVVFRALYPVAWLSGGGGRAGPRIKILLVTPVMYLVVIYLFANMLWAVRSR*NP 549 ++VT YVL++Y + K ++ YRARGERF+RY+ D MLA DR+ NLLE FL +FWL A+ ++Y + A G IYV RALYP ++ G + G +++L VT Y V++ + +++WA+ S NP Sbjct: 11 IWVTLVYVLLYYIFMTHGLRVKVKLFKDYRARGERFDRYFG-QDPEMLAADRIQLNLLEHMPAFLVIFWLY----AIVVSAYWATWA-GAIYVGLRALYP--FVLGRELKGGIPLRLLFVTFSAYGVLLLMVVHIVWALLSTTNP 147
BLAST of mRNA_L-elsbetiae_contig10031.81.1 vs. uniprot
Match: A0A7S3Z8I1_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8I1_9EUKA) HSP 1 Score: 59.7 bits (143), Expect = 8.480e-7 Identity = 40/121 (33.06%), Postives = 62/121 (51.24%), Query Frame = 1 Query: 163 GQASAKHRVASSYRARGERFERYYNVTDKAMLAWDRVVGNLLEQAMPFLTLFWLNIGLAALGATSYESVAAAGWIYVVFRALYPVAWLSGGGGRAGPRIKILLVTPVM-YLVVIYLFANML 522 G+A+ A YR +G R LA R VGN++EQA+PFL W++ S ++ A AGW+++ FRA+YP+ +L G + LL++ V Y VV+YL ++ Sbjct: 88 GEAAPPSFAAIKYRGKGSRIN----------LAASRTVGNMIEQALPFLLSLWMHAIFV-----SPDNAAVAGWVWLGFRAIYPLVFLKG--------LPWLLISTVPGYAVVLYLVGGVI 185
BLAST of mRNA_L-elsbetiae_contig10031.81.1 vs. uniprot
Match: A0A6T7FBR8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7FBR8_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 2.980e-6 Identity = 41/138 (29.71%), Postives = 66/138 (47.83%), Query Frame = 1 Query: 103 IRQGVYVTAGYVLVFYACVIGQASAKHRVASSYRARGERFERYYNVTDKAMLAWDRVVGNLLEQAMPFLTLFWLNIGLAALGATSYESVAAAGWIYVVFRALYPVAWLSGGGGRAGPRIKILLVTPVMYLVVIYLFAN 516 I+ +T + ++ ++ Q K R+ ++A+G+ F RY + ML DR+V NLLE ++ FL+ W LAA G S E+ W YV R LY + + G + G + + T Y ++YL A Sbjct: 6 IQNAARITVVFSTLYMLTLVNQILTKKRLFQQFKAQGKSFHRY---SAPEMLNADRLVANLLEWSLVFLSPLW---SLAATGHLS-EAATKIAWTYVGVRGLYCILVTTFGVNQNGYNLPLWAATLPGYFCLLYLAAQ 136
BLAST of mRNA_L-elsbetiae_contig10031.81.1 vs. uniprot
Match: R1BDZ1_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BDZ1_EMIHU) HSP 1 Score: 60.1 bits (144), Expect = 3.730e-6 Identity = 46/132 (34.85%), Postives = 65/132 (49.24%), Query Frame = 1 Query: 103 IRQGVYVTAGYVLVFYACVIGQASAKHRVASSYRARGERFERYYNVTDKAM-----------------LAWDRVVGNLLEQAMPFLTLFWLNIGLAALGATSYESVAAAGWIYVVFRALYPVAWLSGGGGRA 447 +R V VT G+ ++Y+ + GQA+A + R G + E+ + DKA+ DR VGNLLEQ PFL WL+ AL A+ E+ A GWI+++ RA YPVA+ RA Sbjct: 243 LRPAVAVTIGWCALYYSFLQGQAAAAFWIHKKRREAGNK-EKAGHDKDKALEFASVKYPGRPNTQGLIFVMDRSVGNLLEQTPPFLVAVWLH----ALAASPNEA-AFFGWIWLLLRAAYPVAFAHPSMPRA 368
BLAST of mRNA_L-elsbetiae_contig10031.81.1 vs. uniprot
Match: A0A7S2X5Z2_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X5Z2_9EUKA) HSP 1 Score: 58.5 bits (140), Expect = 3.750e-6 Identity = 49/139 (35.25%), Postives = 69/139 (49.64%), Query Frame = 1 Query: 115 VYVTAGYVLVFYACVIGQASAKHRVASSYRARGERFERYYNVTDKAMLAWDRVVGNLLEQAMPFLTLFWLNIGLAALGATSYESVAAAGWIYVVFRALYPVAWLSGGGGRAGPRIKILLVTPVMYLVVIYLFANMLWAV 531 V VT Y++++ + Q AK AS R E+FER+ + TD+ DR VGN LEQ FL W++ G A AG+IY+ FRA++PV W GG + P I+ L T Y V+ Y + W + Sbjct: 29 VLVTLLYLILYDMSIWNQIFAKIAQASK-RGGMEKFERFDH-TDRHWEMADRTVGNFLEQTPFFLGFLWIHALFENAGGA-----AIAGYIYLGFRAMFPVMWSVGG--QWNPFIE--LSTQPCYAVLNYFKVAIGWKI 156
BLAST of mRNA_L-elsbetiae_contig10031.81.1 vs. uniprot
Match: A0A7S3F9X0_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F9X0_9EUKA) HSP 1 Score: 55.1 bits (131), Expect = 4.140e-5 Identity = 34/89 (38.20%), Postives = 48/89 (53.93%), Query Frame = 1 Query: 247 KAMLAW-DRVVGNLLEQAMPFLTLFWLN-IGLAALGATSYESVAAAGWIYVVFRALYPVAWLSGGGGRAGPRIKILLVTPVMYLVVIYL 507 K W DR NL EQA+ F T W++ + ++A AT++ GW+Y+ FRALYP+ W GG P ++ L T Y V +YL Sbjct: 63 KGQCKWGDRCFMNLQEQAVLFFTSLWMHAVFVSAETATNF------GWLYIFFRALYPIIWAVKGGESGPPFPQLFLSTFTAYGVNVYL 145 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10031.81.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10031.81.1 >prot_L-elsbetiae_contig10031.81.1 ID=prot_L-elsbetiae_contig10031.81.1|Name=mRNA_L-elsbetiae_contig10031.81.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=164bp MSGFCNLSGDSKMEEPAIRQGVYVTAGYVLVFYACVIGQASAKHRVASSYback to top mRNA from alignment at L-elsbetiae_contig10031:199..6210- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10031.81.1 ID=mRNA_L-elsbetiae_contig10031.81.1|Name=mRNA_L-elsbetiae_contig10031.81.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6012bp|location=Sequence derived from alignment at L-elsbetiae_contig10031:199..6210- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10031:199..6210- >mRNA_L-elsbetiae_contig10031.81.1 ID=mRNA_L-elsbetiae_contig10031.81.1|Name=mRNA_L-elsbetiae_contig10031.81.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=984bp|location=Sequence derived from alignment at L-elsbetiae_contig10031:199..6210- (Laminarionema elsbetiae ELsaHSoW15)back to top |