mRNA_L-elsbetiae_contig10030.80.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10030.80.1 vs. uniprot
Match: D8LEI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI7_ECTSI) HSP 1 Score: 211 bits (538), Expect = 6.720e-61 Identity = 125/176 (71.02%), Postives = 133/176 (75.57%), Query Frame = 1 Query: 1 AMSATLDKVREAMPSASSGKKDLVQWFLPTEKNRKESLIEAAQAAADAAEEARKACRARWAALRSSIYGAIQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKV---------------------------------METVSVEMDLRNFIRQARREVAS 429 AMSATLDKVREAMPS SS KKDLVQWFLP+EK RKE+LIE+AQAAADAAEEARKAC A W ALRS ++ A+QEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFK+ ME V+VEMDLRNFIR ARREVAS Sbjct: 183 AMSATLDKVREAMPS-SSNKKDLVQWFLPSEKTRKEALIESAQAAADAAEEARKACLACWVALRSGVHSAVQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKLDELGSKNSEPYRAWHRSKPTSVVWRTLGLAAKLMEAVNVEMDLRNFIRSARREVAS 357
BLAST of mRNA_L-elsbetiae_contig10030.80.1 vs. uniprot
Match: A0A6H5K102_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K102_9PHAE) HSP 1 Score: 211 bits (537), Expect = 1.250e-60 Identity = 123/171 (71.93%), Postives = 133/171 (77.78%), Query Frame = 1 Query: 1 AMSATLDKVREAMPSASSGKKDLVQWFLPTEKNRKESLIEAAQAAADAAEEARKACRARWAALRSSIYGAIQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFK----------------------------VMETVSVEMDLRNFIRQARREVAS 429 AMSATLDKVREAMPS S+ KKDLVQWFLP+EK RKE+LIE+AQAAADAAEEARKAC A W ALRS ++ A+QEFQRVLTDFQGCEEQL+SEAQDGMRKHVVFESSSLANQQYDLQMLFK +ME V+VEMDLRNFIR ARREVAS Sbjct: 184 AMSATLDKVREAMPSGSN-KKDLVQWFLPSEKTRKEALIESAQAAADAAEEARKACLACWVALRSGVHSAVQEFQRVLTDFQGCEEQLMSEAQDGMRKHVVFESSSLANQQYDLQMLFKGCEVNGLTTTACVYISTPRPPPALLHWPLMEAVNVEMDLRNFIRSARREVAS 353
BLAST of mRNA_L-elsbetiae_contig10030.80.1 vs. uniprot
Match: A0A6G0XGP2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGP2_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 5.310e-18 Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 67 LVQWFLPTEKNRKESLIEAAQAAADAAEEARKACRARWAALRSSIYGAIQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKVMETVSVEMDLRNFI 402 LV W LP E+ +K++ + AA + + AE AR+ CR W A + + Q +L D+Q E +S +RKHV+FESSSLAN QYD QML VME + E D+R FI Sbjct: 322 LVSWLLPNEQQKKDNTLLAAVKSIENAEVARQECRQAWLAFEEARIALFRSIQSILNDYQYVAEYRISNLTTSLRKHVIFESSSLANTQYDWQMLAPVMEAIDAESDIRAFI 433
BLAST of mRNA_L-elsbetiae_contig10030.80.1 vs. uniprot
Match: A0A7S3YL22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YL22_HETAK) HSP 1 Score: 83.6 bits (205), Expect = 7.740e-18 Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 1 Query: 58 KKDLVQWFLPTEKNRKESLIEAAQAAADAAEEARKACRARWAALRSSIYGAIQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKVMETVS 375 KKD W LP+++ ++E I+AA+ AAE R C W ++Q +LT FQ EE ++EA+DG+RK +V E+S+LANQQYD+QMLFKVM+ ++ Sbjct: 31 KKDYTGWLLPSKEQKQEEKIQAAKGLLSAAEALRLECIDLWEEYHRVENTEFHDYQCILTSFQKIEELYLAEARDGLRKQLVLEASALANQQYDVQMLFKVMDAIN 136
BLAST of mRNA_L-elsbetiae_contig10030.80.1 vs. uniprot
Match: A0A024UXB4_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UXB4_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 9.620e-18 Identity = 52/123 (42.28%), Postives = 69/123 (56.10%), Query Frame = 1 Query: 34 AMPSASSGKKDLVQWFLPTEKNRKESLIEAAQAAADAAEEARKACRARWAALRSSIYGAIQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKVMETVSVEMDLRNFI 402 +M AS LV W LP+ + +KE+L+ + A + AE AR CRA W + + Q +L D+Q E +S +RKHV+FESS+LAN QYD QML VME V E D+R FI Sbjct: 267 SMSRASLDGTKLVNWLLPSGQQKKENLLLTSVKAIENAEVARHECRAAWNGFEDARVALFRSIQSILNDYQHLAEYSISNLTSSLRKHVIFESSALANSQYDWQMLASVMEAVDAEGDIRAFI 389
BLAST of mRNA_L-elsbetiae_contig10030.80.1 vs. uniprot
Match: A0A067BUI0_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BUI0_SAPPC) HSP 1 Score: 86.3 bits (212), Expect = 1.240e-17 Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 67 LVQWFLPTEKNRKESLIEAAQAAADAAEEARKACRARWAALRSSIYGAIQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKVMETVSVEMDLRNFI 402 LV W LP E +KESL AA A ++AE AR CR +A + + Q +L D+Q E ++ +RKH+VFES++LAN QYD QM+ K ME V V+ D+R FI Sbjct: 39 LVSWLLPNEHQKKESLAVAAARAVESAEAARSECRHAYAGFEDARIALYRSTQSILNDYQTISEHRSTQLTTSLRKHIVFESATLANLQYDWQMVAKPMEAVDVDADIRAFI 150
BLAST of mRNA_L-elsbetiae_contig10030.80.1 vs. uniprot
Match: T0RID7_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RID7_SAPDV) HSP 1 Score: 87.8 bits (216), Expect = 1.560e-17 Identity = 53/123 (43.09%), Postives = 71/123 (57.72%), Query Frame = 1 Query: 34 AMPSASSGKKDLVQWFLPTEKNRKESLIEAAQAAADAAEEARKACRARWAALRSSIYGAIQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKVMETVSVEMDLRNFI 402 A +AS LV W LP E +KESL AA A ++AE AR CR +A + + Q +L D+Q EQ ++ +RKH+VFES++LAN QYD QM+ K +E V V+ DLR FI Sbjct: 213 ASRNASIDSVKLVSWLLPNEHQKKESLAVAAARAVESAEAARFECRQAYAGFEDARVALYRSTQSILNDYQTISEQRSTQLSTSLRKHIVFESATLANLQYDWQMVAKPLEAVDVDADLRAFI 335
BLAST of mRNA_L-elsbetiae_contig10030.80.1 vs. uniprot
Match: A0A835YMJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMJ7_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 3.590e-17 Identity = 50/119 (42.02%), Postives = 74/119 (62.18%), Query Frame = 1 Query: 67 LVQWFLPTEKNRKESLIEAAQAAADAAEEARKACRARWAALRSSIYGAIQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKVMETVSVEMDLRNFIRQARREV 423 ++QW LPTE+ R ESL E+A++A + + AL + E Q L + Q E SE QDG+R++ VFESS+LAN+QYD+QM+FKVMET++ D++ F+ Q+R+ V Sbjct: 55 MIQWLLPTEQQRMESLAESARSAHEXXXXXXXXXXXXYDALCLQVQVTCHELQASLNENQAAESTFASELQDGLRRNAVFESSTLANEQYDVQMVFKVMETINGRTDMQKFV-QSRQSV 172
BLAST of mRNA_L-elsbetiae_contig10030.80.1 vs. uniprot
Match: A0A485L1J4_9STRA (Aste57867_14774 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1J4_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.570e-16 Identity = 46/112 (41.07%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 67 LVQWFLPTEKNRKESLIEAAQAAADAAEEARKACRARWAALRSSIYGAIQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKVMETVSVEMDLRNFI 402 LV W LP+E+ +K++L+ + + AE AR+ CR W + + Q +L D+Q E ++ +RKHV+FES+SLAN QYD QML VME V + DLR+FI Sbjct: 263 LVSWLLPSEQQKKDNLLLQSVKCIENAEVARRECRHAWLGFEEARIALFRSIQSILNDYQQMAEYKIANLTTSLRKHVIFESASLANGQYDWQMLAGVMEAVDADADLRHFI 374
BLAST of mRNA_L-elsbetiae_contig10030.80.1 vs. uniprot
Match: W4FBW5_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FBW5_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.180e-16 Identity = 46/112 (41.07%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 67 LVQWFLPTEKNRKESLIEAAQAAADAAEEARKACRARWAALRSSIYGAIQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKVMETVSVEMDLRNFI 402 LV W LP+ + +K++L+ + A + AE +R CR W + + Q +L D+Q E +S +RKHV+FESS+LAN QYD QML VME V E D+R FI Sbjct: 296 LVSWLLPSGQQKKDNLLITSVKAIETAETSRHECRVAWNGFEDARVALFRSIQSILNDYQHMAEYSISNLTASLRKHVIFESSALANSQYDWQMLATVMEAVDAERDIRAFI 407 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10030.80.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10030.80.1 >prot_L-elsbetiae_contig10030.80.1 ID=prot_L-elsbetiae_contig10030.80.1|Name=mRNA_L-elsbetiae_contig10030.80.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=142bp MSATLDKVREAMPSASSGKKDLVQWFLPTEKNRKESLIEAAQAAADAAEEback to top mRNA from alignment at L-elsbetiae_contig10030:947..3283- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10030.80.1 ID=mRNA_L-elsbetiae_contig10030.80.1|Name=mRNA_L-elsbetiae_contig10030.80.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2337bp|location=Sequence derived from alignment at L-elsbetiae_contig10030:947..3283- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10030:947..3283- >mRNA_L-elsbetiae_contig10030.80.1 ID=mRNA_L-elsbetiae_contig10030.80.1|Name=mRNA_L-elsbetiae_contig10030.80.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=852bp|location=Sequence derived from alignment at L-elsbetiae_contig10030:947..3283- (Laminarionema elsbetiae ELsaHSoW15)back to top |