mRNA_L-elsbetiae_contig1003.76.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1003.76.1 vs. uniprot
Match: D8LR56_ECTSI (Phosphatidylinositol-4-phosphate 5-kinase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR56_ECTSI) HSP 1 Score: 706 bits (1823), Expect = 5.200e-231 Identity = 550/969 (56.76%), Postives = 597/969 (61.61%), Query Frame = 1 Query: 223 MGNEQSVDGQSVPDTGLRLSSLCHYHAGTAGNEEGMAFSWFQPSTDVSGLALKGAHRWGYVLSHTGGQRLFKDSRQRFFVLLDHYLCYFDSHTPEARMKGSIDLDKTHCHLELLPRPPESADVALQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCFSSATSLADWLKSIFDVQQRKATFSPLRHGTGXXXXXXXXXXXXXXXXXXXXX--SGLPQSLPRRGRY---------GISSXXXXXXXXXXXXXXXSFARARR-----------GTLDSXXXXXXXXXXXXXGVSGVPFSWADGFP---TEGGRXXXXXXXXXXXXRIRRDRPPPKGPLESLHPSRSRRPHQTSASSSAAVLLGKASERLAGLPRGGRAAGSRNGSSGGRGGG-SADQYGAFTTARASIYEGWTRGLQPHGWGRMVFANGDCVEGWWEHDVLQGSGEYTSQREGWTYRGGYVAGERXXXXXXXXXXXXXXXXXXXXX---VVAHASRGTHATAGGEVYQGGCGPCADDPAVPCRAGQGRLRRRNGDQVDTRFRAGRAVDGAKGVVRFRNGAIFFGELHDARPHGYGELYLSSVKAGKHSGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKCSGALAELDEMARDVLWYKGLFHLGKPHGSGLVKYKEPLPAAAASSGPIKGAVAEAAEGEGGV-PATQPPVRGGWGESKEEDGQRGETGGGPRKEGRGAAVVVAGAGGDAEEEHGVPLAVGATDEGLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------ADMEYEAEFVCGVMVRHDPSHLRLAALRFGRAEIRRLETLLRKEEDAMSRMRVKGLCLLCNAEEMNALLVRCRHRVLCVGCAERADNCPVCGERIGGEVVKTYST 3009 MGNEQS +GQ++P+ GLRLS+LC Y A G+E+G+AFSWFQ STDVSGL L+GAHR+GYVLSH GGQRLFKD+RQRFFVLLDHYLC+FDSH+PEARMKGSIDLDKTHCH+ELLPRPPE+ D LQ LCFSSATSL+DW+KS+FDVQQRKATFSPLRHGTG XXXXXX XXXXXXXXX S LP SLPR Y GI+S XXXXXXXX GTL S XXXXXXXXXX G+ GVP SWAD EGG G E P R R P S +S+AV LGKASERLAGLPRGGRAAG+ SS G S D+YGAFTTA+ASIYEGWTRGLQPHGWGRMVFANGD VEGWWEHDVL GS EYTS++EGWTY GGY GER VVA SRGTHATA GE+YQGGCGP A DPA+P R+GQGRLRRR+G QVDTRFRAGRAVDGAKGVVRFRNGAIFFGEL +ARPHG RK G+LAEL EMARDVLWYKG F LGKPHGSG++KYK+P P+ A G + GAVAE G G P +P VR E DG+ GE P + GA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXX ADMEYEAEFV GVMVRHD HLRLAALRFGRAEIRRLETLL+KEEDAMSR+RVKGLCLLCN EEMNALLV CRH+VLC+GCA RAD CPVC E IG +VV+TYST Sbjct: 1 MGNEQSFEGQAIPENGLRLSTLCRYQA-EPGDEDGLAFSWFQASTDVSGLVLRGAHRYGYVLSHVGGQRLFKDTRQRFFVLLDHYLCFFDSHSPEARMKGSIDLDKTHCHIELLPRPPETVDTILQ------------------VGGGSGSSSEGDEHRVEVTRRTDEFSMVLCFSSATSLSDWMKSVFDVQQRKATFSPLRHGTGGXXXXXXISSEGXXXXXXXXXXXSDLPGSLPRAPTYINSRGNNSSGIASSGRGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXGTLGSPPXXXXXXXXXX-GLRGVPSSWADDIDIRANEGGGGRT-------------------GEAEDAPPLRLR-PRHMSTPTSSAVRLGKASERLAGLPRGGRAAGNNASSSSSNVSGCSLDEYGAFTTAQASIYEGWTRGLQPHGWGRMVFANGDRVEGWWEHDVLHGSAEYTSRQEGWTYSGGYENGERHGPGRLVFSSAGGGDVWDCEWDRGVVARGSRGTHATADGELYQGGCGPSAADPAMPVRSGQGRLRRRDGGQVDTRFRAGRAVDGAKGVVRFRNGAIFFGELQEARPHGRSSR-----------------------------------------------RKPRGSLAELHEMARDVLWYKGDFRLGKPHGSGVIKYKDPAPSLPADRG-VGGAVAEEERGGAGAGPPGRPRVRASCESKDEYDGEGGE----PEAKQGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGALPEGGEEKAATALAARRGQRAPADGSXXXXXXXXXXXXXSGADMEYEAEFVDGVMVRHDAEHLRLAALRFGRAEIRRLETLLKKEEDAMSRLRVKGLCLLCNVEEMNALLVACRHKVLCMGCASRADRCPVCNETIG-KVVRTYST 876 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1003.76.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1003.76.1 >prot_L-elsbetiae_contig1003.76.1 ID=prot_L-elsbetiae_contig1003.76.1|Name=mRNA_L-elsbetiae_contig1003.76.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=930bp MGNEQSVDGQSVPDTGLRLSSLCHYHAGTAGNEEGMAFSWFQPSTDVSGLback to top mRNA from alignment at L-elsbetiae_contig1003:741..10277+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1003.76.1 ID=mRNA_L-elsbetiae_contig1003.76.1|Name=mRNA_L-elsbetiae_contig1003.76.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9537bp|location=Sequence derived from alignment at L-elsbetiae_contig1003:741..10277+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1003:741..10277+ >mRNA_L-elsbetiae_contig1003.76.1 ID=mRNA_L-elsbetiae_contig1003.76.1|Name=mRNA_L-elsbetiae_contig1003.76.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5580bp|location=Sequence derived from alignment at L-elsbetiae_contig1003:741..10277+ (Laminarionema elsbetiae ELsaHSoW15)back to top |