mRNA_L-elsbetiae_contig10.24.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10.24.1 vs. uniprot
Match: D1J798_ECTSI (Cytochrome b6 n=62 Tax=Stramenopiles TaxID=33634 RepID=D1J798_ECTSI) HSP 1 Score: 440 bits (1132), Expect = 1.950e-156 Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 1 Query: 1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVP+IGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL Sbjct: 1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig10.24.1 vs. uniprot
Match: CYB6_THAPS (Cytochrome b6 n=103 Tax=cellular organisms TaxID=131567 RepID=CYB6_THAPS) HSP 1 Score: 412 bits (1058), Expect = 3.740e-145 Identity = 194/215 (90.23%), Postives = 206/215 (95.81%), Query Frame = 1 Query: 1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645 MGKVYDWFEERLE+Q+IADDI+SKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPS+ +AF+SVEYIMT VNFGWLIRSIHRWSASMMV+ML+LHVFRVYLTGGFKKPRELTWVTGV LAV TVSFGVTGYSLPWDQVGFWACKIVTGVP AVPI+GPP+V +LRGG SVGQSTLTRFYSAHTFVLPL AA LM+THFLMIRKQGISGPL Sbjct: 1 MGKVYDWFEERLEVQAIADDISSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSVVDAFASVEYIMTSVNFGWLIRSIHRWSASMMVMMLVLHVFRVYLTGGFKKPRELTWVTGVILAVVTVSFGVTGYSLPWDQVGFWACKIVTGVPAAVPIVGPPLVLVLRGGESVGQSTLTRFYSAHTFVLPLAAAVLMLTHFLMIRKQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig10.24.1 vs. uniprot
Match: J9QUX6_9STRA (Cytochrome b6 n=2 Tax=Pelagomonadales TaxID=54409 RepID=J9QUX6_9STRA) HSP 1 Score: 410 bits (1054), Expect = 1.520e-144 Identity = 193/215 (89.77%), Postives = 207/215 (96.28%), Query Frame = 1 Query: 1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645 M KVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRP++S+AF+SVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGV L T SFGVTGYSLPWDQVGFWACKIVTGVP+++P++GP +V +LRGGVSVGQSTLTRFYSAHTFVLP+VAAALM+THFLMIR+QGISGPL Sbjct: 1 MSKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPTVSDAFASVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVLLGAVTASFGVTGYSLPWDQVGFWACKIVTGVPDSIPVVGPLLVGVLRGGVSVGQSTLTRFYSAHTFVLPVVAAALMLTHFLMIRQQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig10.24.1 vs. uniprot
Match: A0A0D3M5L9_9STRA (Cytochrome b6 n=19 Tax=Ochrophyta TaxID=2696291 RepID=A0A0D3M5L9_9STRA) HSP 1 Score: 407 bits (1045), Expect = 3.580e-143 Identity = 188/215 (87.44%), Postives = 207/215 (96.28%), Query Frame = 1 Query: 1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645 MGKVYDWFEERLEIQ+IADDITSKYVPPHVNIFYCFGGI TCFL+QVATGFAMTFYYRP++++AF+SVEY+MTE NFGWLIRSIHRWSASMMVLM+ILHVFRVYLTGGFK+PRELTWVTGV L+V TVSFGVTGYSLPWDQVG+WACKIVTGVPEA+P+IG P+V+LLRGGVSVGQ+TLTRFYS HTFVLPL+AA LM+THFLMIRKQGISGPL Sbjct: 1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCFGGITLTCFLIQVATGFAMTFYYRPTVTDAFASVEYLMTEANFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKRPRELTWVTGVLLSVITVSFGVTGYSLPWDQVGYWACKIVTGVPEAIPVIGSPLVELLRGGVSVGQATLTRFYSLHTFVLPLLAAVLMLTHFLMIRKQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig10.24.1 vs. uniprot
Match: CYB6_GUITH (Cytochrome b6 n=13 Tax=Eukaryota TaxID=2759 RepID=CYB6_GUITH) HSP 1 Score: 404 bits (1039), Expect = 2.940e-142 Identity = 187/215 (86.98%), Postives = 206/215 (95.81%), Query Frame = 1 Query: 1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645 MGKVYDWFEERLEIQ+IADDITSKYVPPHVNIFYC GGI FTCF++QVATGFAMTFYYRP+++EAF+SVEYIMTEVN+GWL RS+HRWSASMMVLM+ILHVFRVYLTGGFKKPRELTWVTGVTLAV TVSFGVTGYSLPWDQVG+WACKIVTGVPEA+P++G +V+LLRG VSVGQ+TLTRFYSAHTFVLP+ AA LM+THFLMIRKQGISGPL Sbjct: 1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCIGGITFTCFIIQVATGFAMTFYYRPTVAEAFASVEYIMTEVNYGWLFRSMHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVTLAVVTVSFGVTGYSLPWDQVGYWACKIVTGVPEAIPVVGSLLVELLRGSVSVGQATLTRFYSAHTFVLPVAAAVLMLTHFLMIRKQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig10.24.1 vs. uniprot
Match: A0A516ZA38_9STRA (Cytochrome b6 n=4 Tax=Dictyochophyceae TaxID=39119 RepID=A0A516ZA38_9STRA) HSP 1 Score: 400 bits (1028), Expect = 2.080e-140 Identity = 185/215 (86.05%), Postives = 203/215 (94.42%), Query Frame = 1 Query: 1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645 M KVYDWFEERLE+Q+IADDITSKYVPPHVNIFYCFGGIV TCFLVQVATGFAMT YYRP++ EAF+SVEYIMT+VNFGWLIRSIHRWSASMMV+M++LHVFRVYLTGGFKKPRELTW+TGV LAV TVSFGVTGYSLPWDQVG+WACKIVTGVPEAVP++G ++ LLRGGVSVGQSTLTRFYSAHTF+LP+ A LM+THFLMIRKQGISGPL Sbjct: 12 MSKVYDWFEERLEVQAIADDITSKYVPPHVNIFYCFGGIVLTCFLVQVATGFAMTVYYRPTVVEAFASVEYIMTQVNFGWLIRSIHRWSASMMVMMMVLHVFRVYLTGGFKKPRELTWITGVILAVVTVSFGVTGYSLPWDQVGYWACKIVTGVPEAVPVVGTTVLYLLRGGVSVGQSTLTRFYSAHTFILPVAAVVLMLTHFLMIRKQGISGPL 226
BLAST of mRNA_L-elsbetiae_contig10.24.1 vs. uniprot
Match: CYB6_GRATL (Cytochrome b6 n=171 Tax=Eukaryota TaxID=2759 RepID=CYB6_GRATL) HSP 1 Score: 397 bits (1019), Expect = 3.300e-139 Identity = 187/215 (86.98%), Postives = 203/215 (94.42%), Query Frame = 1 Query: 1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645 MGKVYDWFEERLEIQ+IADDITSKYVPPHVNIFYC GGIVFT FL+QVA+GFAMTFYYRP+++EAFSSVEYIMT+VNFGWLIRSIHRWSASMMVLMLILH+FRVYLTGGFKKPRELTWVTGV LAV TVSFGVTGYSLPWDQ+G+WA KIVTGVPEA+P++G IV+LLRGGVSVGQSTLTRFYS HTFVLPL+ A M+ HFLMIRKQGISGPL Sbjct: 1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCIGGIVFTSFLIQVASGFAMTFYYRPTVAEAFSSVEYIMTDVNFGWLIRSIHRWSASMMVLMLILHMFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVVGGSIVELLRGGVSVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig10.24.1 vs. uniprot
Match: W0RYI6_PORPP (Cytochrome b6 n=17 Tax=Eukaryota TaxID=2759 RepID=W0RYI6_PORPP) HSP 1 Score: 395 bits (1016), Expect = 9.450e-139 Identity = 185/215 (86.05%), Postives = 203/215 (94.42%), Query Frame = 1 Query: 1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645 MGKVYDWF+ERLEIQ+IADDITSKYVPPHVNIFYCFGGIV TCF++QVA+GFAMTFYYRPS++EAFSSV YIMT+VNFGWLIRSIHRWSASMMVLM+ILH FRVYLTGGFK PRELTWVTGVTLAV TVSFGVTGYSLPWDQVGFWA KIVTGVPEA+P++G +V+LLRGGVSVGQ+TLTRFYS HTFVLPL+ A +M+ HFLMIRKQGISGPL Sbjct: 1 MGKVYDWFQERLEIQAIADDITSKYVPPHVNIFYCFGGIVLTCFIMQVASGFAMTFYYRPSVAEAFSSVSYIMTDVNFGWLIRSIHRWSASMMVLMMILHSFRVYLTGGFKTPRELTWVTGVTLAVLTVSFGVTGYSLPWDQVGFWAVKIVTGVPEAIPVVGSSLVELLRGGVSVGQTTLTRFYSLHTFVLPLLTAVVMLMHFLMIRKQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig10.24.1 vs. uniprot
Match: CYB6_EMIHU (Cytochrome b6 n=10 Tax=cellular organisms TaxID=131567 RepID=CYB6_EMIHU) HSP 1 Score: 393 bits (1010), Expect = 7.760e-138 Identity = 185/215 (86.05%), Postives = 202/215 (93.95%), Query Frame = 1 Query: 1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645 M VYDWF+ERLEIQ+IADDITSKYVPPHVNIFYC GGI TCF+VQVATGFAMTFYYRP+++EAF+SVEY+MTEVNFGWLIRS+HRWSASMMVL +ILHV RVYLTGGFKKPRELTWVTGV LA TVSFGVTGYSLPWDQVG+WACKIVTGVP+AVPI+G IVQ+LRGGVSVGQSTLTRFYSAHTFVLP+VAA LM+THF+MIRKQGISGPL Sbjct: 1 MSSVYDWFQERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFIVQVATGFAMTFYYRPTVTEAFASVEYLMTEVNFGWLIRSVHRWSASMMVLNMILHVCRVYLTGGFKKPRELTWVTGVLLASVTVSFGVTGYSLPWDQVGYWACKIVTGVPDAVPIVGGLIVQVLRGGVSVGQSTLTRFYSAHTFVLPVVAAVLMLTHFVMIRKQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig10.24.1 vs. uniprot
Match: A0A170TME3_9CHLO (Cytochrome b6 n=2 Tax=Palmophyllaceae TaxID=2201466 RepID=A0A170TME3_9CHLO) HSP 1 Score: 393 bits (1010), Expect = 7.760e-138 Identity = 184/215 (85.58%), Postives = 200/215 (93.02%), Query Frame = 1 Query: 1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 645 M KVY+WF+ERLEIQ+IADDITSKYVPPHVNIFYCFGGIV TCFLVQVATGFAMTFYYRP++++AF SV Y+MT VNFGWLIRSIHRWSASMMVL +ILH+FRVYLTGGFKKPRELTWVTGV LAV TVSFGVTGYSLPWDQVG+WACKIVTGVPEAVP IGP +V+LLRG VSVGQ+TLTRFYSAHTFVLPL+ A M+ HFLMIRKQGISGPL Sbjct: 1 MSKVYNWFDERLEIQAIADDITSKYVPPHVNIFYCFGGIVLTCFLVQVATGFAMTFYYRPTVTDAFESVSYLMTSVNFGWLIRSIHRWSASMMVLTMILHIFRVYLTGGFKKPRELTWVTGVILAVCTVSFGVTGYSLPWDQVGYWACKIVTGVPEAVPFIGPIVVELLRGSVSVGQATLTRFYSAHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10.24.1 >prot_L-elsbetiae_contig10.24.1 ID=prot_L-elsbetiae_contig10.24.1|Name=mRNA_L-elsbetiae_contig10.24.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=216bp MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATback to top mRNA from alignment at L-elsbetiae_contig10:44924..45571+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10.24.1 ID=mRNA_L-elsbetiae_contig10.24.1|Name=mRNA_L-elsbetiae_contig10.24.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=648bp|location=Sequence derived from alignment at L-elsbetiae_contig10:44924..45571+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10:44924..45571+ >mRNA_L-elsbetiae_contig10.24.1 ID=mRNA_L-elsbetiae_contig10.24.1|Name=mRNA_L-elsbetiae_contig10.24.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1296bp|location=Sequence derived from alignment at L-elsbetiae_contig10:44924..45571+ (Laminarionema elsbetiae ELsaHSoW15)back to top |