mRNA_L-elsbetiae_contig10.17.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10.17.1
Unique NamemRNA_L-elsbetiae_contig10.17.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A6B7EVT1_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EVT1_9PHAE)

HSP 1 Score: 1164 bits (3010), Expect = 0.000e+0
Identity = 570/618 (92.23%), Postives = 597/618 (96.60%), Query Frame = 1
Query:    1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILNKSEVK 1854
            MKNLKQKFDYVKINLASPERI+EWAEKVLPNGE VGEVTEPETINYRTHKPEKGGLFCEKIFGPVK+WEC+CGLHK+K+K+VFFCEVCGVE+TE+RVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASP+ ELE+VIYNG  P+QD+DV KYE+VFLSSFYD+EGEGFHYG KRQGAEI+Y RLK +DLK+EIE NRNIMF +T+K KVE AIKKIRIFENFLTT TRPEWMV YFLPVLPPGIRPIV+L+NGRFATSDLNELYRKIIIRN RLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIY NEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVC+SFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTT+NRK LRGSNNYFANFNEVISAY+QKQLQLHSAIWVRCPND+NLD+PLKFIKKI LSKTT LVIYNNLQRKE + GELLVQYLRTTPGRIIFNQCVNDILNKSEVK
Sbjct:    1 MKNLKQKFDYVKINLASPERIQEWAEKVLPNGERVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECSCGLHKFKKKDVFFCEVCGVEVTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPINELEAVIYNGKEPDQDEDVAKYEEVFLSSFYDTEGEGFHYGKKRQGAEILYHRLKNLDLKVEIEKNRNIMFFETAKKKVEAAIKKIRIFENFLTTNTRPEWMVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTRNRKNLRGSNNYFANFNEVISAYKQKQLQLHSAIWVRCPNDINLDNPLKFIKKINLSKTTQLVIYNNLQRKETIDGELLVQYLRTTPGRIIFNQCVNDILNKSEVK 618          
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: D1J788_ECTSI (DNA-directed RNA polymerase subunit beta' n=8 Tax=Ectocarpales TaxID=2877 RepID=D1J788_ECTSI)

HSP 1 Score: 1138 bits (2944), Expect = 0.000e+0
Identity = 556/618 (89.97%), Postives = 587/618 (94.98%), Query Frame = 1
Query:    1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILNKSEVK 1854
            MKNLKQKFDYVKINLASPERI+EWAEK LPNGEIVGEVT+PETINYRTHKPEKGGLFCEKIFGPVK+WECTCGLHKYKEKNVFFCEVCGVELTE+RVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASP+ +LE+VIYNG  P+QD+D+ KYEQVFLSSFYD+EGEGFHYG KRQGAEI+Y RLKKIDLK EIE NRN+MF    K KVEVAIKKIRIFENFLTT TRPEWMV +F+PVLPPGIRPIV+L+NGRFATSDLNELYRKIIIRN RLKRLLSVHAPSVV+ TEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP LKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEIL+KHPIILNRAPTLHRLGVQAFDPVL+RGR+IQLHPLVC+SFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLS SSGEPTIQPSQDMVLGFYYLTTQNR  L GSNNYF++FNEVISAY+QKQ+Q+HS+IWVRCPN++NLDSPLKFIKKI LS    L IYNNLQRKE M GELLVQ+LRTTPGRIIFNQCVNDILNKSEVK
Sbjct:    1 MKNLKQKFDYVKINLASPERIKEWAEKTLPNGEIVGEVTQPETINYRTHKPEKGGLFCEKIFGPVKNWECTCGLHKYKEKNVFFCEVCGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPISKLEAVIYNGKKPDQDEDLAKYEQVFLSSFYDTEGEGFHYGKKRQGAEILYHRLKKIDLKTEIEINRNVMFFSEVKKKVEVAIKKIRIFENFLTTGTRPEWMVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVISAYQQKQVQIHSSIWVRCPNEINLDSPLKFIKKINLSNNNTLTIYNNLQRKETMGGELLVQFLRTTPGRIIFNQCVNDILNKSEVK 618          
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A0R6MFT6_UNDPI (DNA-directed RNA polymerase subunit beta' n=25 Tax=Laminariales TaxID=2886 RepID=A0A0R6MFT6_UNDPI)

HSP 1 Score: 1047 bits (2707), Expect = 0.000e+0
Identity = 510/614 (83.06%), Postives = 556/614 (90.55%), Query Frame = 1
Query:    1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILNK 1842
            MKN+KQ+F+YVKINLASPERI+EWAEK+LPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVK+ ECTCG +K+KE +   CE+CGVELTE+RVRRHRMGYI LLSPVVHIWYLKGSPS LS +L S + +LE V+YNG  P QD DV KY+  F    YD+EGEGF YG KRQGAEI+YDRLK+IDLK+EI +NRNIMF       VE AIK+IRIFENFLTT TRPEWMV +FLPVLPPGIRP+V+L+NGRFATSDLNELYRKIIIRN RLKRLLSVHAPSVVI TEKRMIQEAVDTLIDNGKRGSK+LDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPFIIY+LLSQGLSHSIK+AKKIIYSN+ FIWYLTEEIL+KHPIILNRAPTLHRLGVQAFDPVL+RGRAIQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQPSQDMVLGFYYLT QNR GL+GSNNYF+NFNEVI+AYEQKQLQLHS+IWVRCP D+ LD+ LKF+K I L     L IYNNLQRKE   G+LLVQY+RTTPGRIIFNQC+N+ILNK
Sbjct:    1 MKNMKQQFEYVKINLASPERIKEWAEKILPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNCECTCGRYKHKEPDTLICEICGVELTESRVRRHRMGYINLLSPVVHIWYLKGSPSFLSTILDSSITKLEGVVYNGKEPEQDQDVSKYDDFF----YDTEGEGFVYGKKRQGAEILYDRLKRIDLKVEIASNRNIMFCSNVTKAVEDAIKRIRIFENFLTTNTRPEWMVLHFLPVLPPGIRPMVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVILTEKRMIQEAVDTLIDNGKRGSKVLDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLELNQCGLPYEMAIELFLPFIIYKLLSQGLSHSIKKAKKIIYSNQSFIWYLTEEILRKHPIILNRAPTLHRLGVQAFDPVLVRGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPSQDMVLGFYYLTAQNRMGLKGSNNYFSNFNEVITAYEQKQLQLHSSIWVRCPKDITLDTELKFLKTIVLDNLQTLHIYNNLQRKETKDGQLLVQYIRTTPGRIIFNQCINNILNK 610          
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A8F0F9J3_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9J3_9PHAE)

HSP 1 Score: 1024 bits (2648), Expect = 0.000e+0
Identity = 500/614 (81.43%), Postives = 550/614 (89.58%), Query Frame = 1
Query:    1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILNK 1842
            MKN+KQ+F+YVKINLASP+ I+EWAEK LPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVK+WECTCG +K ++ ++  CE CGVELTE+RVRRHRMGYI LLSPVVHIWYLKGSPSLLSA+L S +  LESVIYNG  P QD D+ KY   F    YD+  EGF +  K QGAEI+YD LKKI+LK EIE NRNIM    +  K+E AIK++RIFENFLTT TRPEW + +FLPVLPPGIRP+V+L+NGRFATSDLNELYRKIIIRN RLKRLLSVHAP+VVI TEKRMIQEAVDTLIDNGKRGSK+LDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPF+IY+LLSQ LSHSIKRAKKIIYSN PFIW+LTEEIL+KHPIILNRAPTLHRLGVQAFDP+L+RGRAIQLHPLVCA+FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQPSQDMVLGFYYLT QNR  L+G+NNYF++FNEVISAYEQKQLQ+HS+IWVRCP D+ LD  LKF+K I LS   NL IYNNLQRKE  +GELLVQY+RTTPGRIIFN+CVNDILNK
Sbjct:    1 MKNMKQQFEYVKINLASPDCIKEWAEKTLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECTCGRYKQRDLSIVVCETCGVELTESRVRRHRMGYINLLSPVVHIWYLKGSPSLLSAILYSSITRLESVIYNGKEPGQDQDISKYTDFF----YDAMDEGFVFSKKSQGAEILYDSLKKINLKEEIEDNRNIMLCSKAVKKIEDAIKRVRIFENFLTTNTRPEWTILHFLPVLPPGIRPMVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVILTEKRMIQEAVDTLIDNGKRGSKVLDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLELNQCGLPYEMAIELFLPFLIYKLLSQELSHSIKRAKKIIYSNRPFIWHLTEEILRKHPIILNRAPTLHRLGVQAFDPILVRGRAIQLHPLVCAAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPSQDMVLGFYYLTAQNRMQLKGANNYFSDFNEVISAYEQKQLQVHSSIWVRCPTDITLDIQLKFLKTIVLSNNENLHIYNNLQRKETKTGELLVQYIRTTPGRIIFNECVNDILNK 610          
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: D1GJH3_FUCVE (DNA-directed RNA polymerase subunit beta' n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJH3_FUCVE)

HSP 1 Score: 996 bits (2575), Expect = 0.000e+0
Identity = 476/615 (77.40%), Postives = 546/615 (88.78%), Query Frame = 1
Query:    1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRC--PNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILN 1839
            MKN+K++F+Y++INLASP+RI+EW+EK+LP GEI+GEVTEPETINYRTHKPEKGGLFCEKIFGPVK+WEC CG +K+K++ +  CE+CGVELTE+RVRRHRMGYIKLL+PVVHIWYLKGSPS LS +L S + ++E+++Y+G  P ++ ++ KYE  F    Y+++G GF YG K QG EI+YD+LK+IDLK+EIE NRNIMF       VE AIK+IRIFENFLTT TRPEWM+  FLPVLPPGIRP+VQL+NGRFATSDLNELYRKIIIRN RLKRLLSVHAPS+VI TEKRMIQE+VDTLIDNGKRGSK++D N+RPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP+L LNQCGLPYEMAIELFLPFIIYRLLSQGL HSIK+AKKIIYSN+ FIWYLT+EIL KHPIILNRAPTLHRLGVQAFDP+L+ GRAIQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQPSQDMVLGFYYLT QNR GL+G+NNYF+NF+EV+SAY+QKQLQ+HS IWVRC   N + LD+ LKF K I L    N+ +YNNLQRKE   G+LLVQY+RTTPGRIIFNQC+NDILN
Sbjct:    1 MKNVKEQFEYLRINLASPKRIKEWSEKILPTGEIIGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGRYKHKDEEIAICEICGVELTESRVRRHRMGYIKLLTPVVHIWYLKGSPSFLSIVLDSSISQIEAIVYSGKEPEKEHNILKYEDFF----YENQGPGFVYGKKPQGTEILYDKLKRIDLKVEIEINRNIMFCSNVTKVVEAAIKRIRIFENFLTTNTRPEWMILNFLPVLPPGIRPMVQLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSIVIMTEKRMIQESVDTLIDNGKRGSKVVDTNRRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPELHLNQCGLPYEMAIELFLPFIIYRLLSQGLCHSIKKAKKIIYSNQSFIWYLTKEILSKHPIILNRAPTLHRLGVQAFDPILVNGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPSQDMVLGFYYLTAQNRIGLKGTNNYFSNFHEVLSAYQQKQLQIHSTIWVRCFNSNQIFLDNELKFCKTIALGNDINIHVYNNLQRKETSQGKLLVQYIRTTPGRIIFNQCLNDILN 611          
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A8F0JZT2_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZT2_9PHAE)

HSP 1 Score: 985 bits (2546), Expect = 0.000e+0
Identity = 479/614 (78.01%), Postives = 541/614 (88.11%), Query Frame = 1
Query:    1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILNK 1842
            MK +KQ+F+YVKINLASPERI+EW EK LPNG+IVGEV EPETINYRTHKPEK GLFCEKIFGPVK+WECTCG +K+KE++   CEVCGVE+TE+RVRRHRMGYIKLL+PV+HIWYLKGSPS LSA+LAS V  +E ++Y      +D +   YE  F +       EGF YG K +G EI+YDRLKKI+LK EIE+NRNIMF   +   VE AIK+IRI+ENFLTT TRPEWM+  FLPVLPPG+RP+V+L++GRFATSDLNELYRKII+RN RL RLLSVHAP++VI+TEKRMIQEAVDTLIDNGKRGSK+LDAN+RPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPF+I++LL QGL++SIKRAKKIIYSN  FIWYLTEE LKKHPIILNRAPTLHRLGVQAFDPVL+RGRAIQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQP+QDMVLGFYYLT  NR  L+G+NNYF+NFNEV+ AYEQKQLQLHS++WVR PN++ LD+PL ++K ITL    NL IYNNLQRKE M G+LLVQYLRTTPGRIIFNQCVNDILNK
Sbjct:    1 MKKVKQEFEYVKINLASPERIKEWGEKTLPNGKIVGEVIEPETINYRTHKPEKDGLFCEKIFGPVKNWECTCGRYKHKEEDTLICEVCGVEVTESRVRRHRMGYIKLLAPVLHIWYLKGSPSYLSAILASSVTNIEGLVYG-----RDPEFFDYEDFFFND------EGFVYGKKLEGTEILYDRLKKINLKTEIESNRNIMFCSNATKVVEDAIKRIRIYENFLTTNTRPEWMILNFLPVLPPGLRPMVKLDSGRFATSDLNELYRKIILRNKRLGRLLSVHAPNIVITTEKRMIQEAVDTLIDNGKRGSKVLDANRRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLQLNQCGLPYEMAIELFLPFLIHKLLFQGLANSIKRAKKIIYSNRSFIWYLTEETLKKHPIILNRAPTLHRLGVQAFDPVLVRGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPTQDMVLGFYYLTANNRMQLKGANNYFSNFNEVVIAYEQKQLQLHSSVWVRLPNNITLDTPLTYLKTITLKSNENLHIYNNLQRKETMDGKLLVQYLRTTPGRIIFNQCVNDILNK 603          
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A141BSD2_9PHAE (DNA-directed RNA polymerase subunit beta' n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSD2_9PHAE)

HSP 1 Score: 984 bits (2544), Expect = 0.000e+0
Identity = 471/613 (76.84%), Postives = 546/613 (89.07%), Query Frame = 1
Query:    1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILN 1839
            MK ++++F+Y++INLASP+RI+EW++K LP GE++GEVTEPETINYRTHKPEKGGLFCEKIFGPVK+WEC CG +K+++  +  CE CGVELTE+RVRRHRMGYIKLL+PVVHIWYLKG+PS L+++L SP+  +E++IY+G  P QD +V KYE  F     +++  GF +G K QGAEI+YD+LK IDLKIEIETNRNIMF  T    VE AIK+IRIFENFL+T TRPEWM+  FLPVLPPGIRP+V+LENGRFATSDLNELYRKIIIRN RLKRLLSVHAPS+VI TEKRMIQE+VDTLIDNGKRGSK++DAN+RPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP+L+LNQCGLPYEMAIELFLPFIIY+LLSQGL HSIK+AKKII+SN+PFIWYLT+EIL KHPIILNRAPTLHRLGVQAFDPVL++GRAIQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSP++GEP IQPSQDM+LGFYYLTT NR GL+G+NNYF++F+EV+SAY+ KQL++HS IWVRC N++ LDS LKFIK I  +    L IYNNLQRKE   G+ LVQY+RTTPGRIIFNQC+NDILN
Sbjct:    1 MKTIEEQFEYIRINLASPQRIKEWSQKTLPTGEVIGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGRYKHRDDEISICETCGVELTESRVRRHRMGYIKLLTPVVHIWYLKGAPSFLASILDSPISRIETIIYSGKEPEQDQEVLKYEDFFP----ENQLPGFVFGKKPQGAEILYDKLKNIDLKIEIETNRNIMFCSTVTKVVEAAIKRIRIFENFLSTNTRPEWMILQFLPVLPPGIRPMVKLENGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSIVIITEKRMIQESVDTLIDNGKRGSKVVDANRRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPKLQLNQCGLPYEMAIELFLPFIIYKLLSQGLCHSIKKAKKIIHSNQPFIWYLTKEILSKHPIILNRAPTLHRLGVQAFDPVLVKGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPATGEPNIQPSQDMILGFYYLTTHNRLGLKGANNYFSSFHEVLSAYQHKQLKVHSPIWVRCSNELLLDSKLKFIKTIN-NNNNKLHIYNNLQRKETSEGKFLVQYIRTTPGRIIFNQCLNDILN 608          
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A8F0JYE1_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYE1_9PHAE)

HSP 1 Score: 907 bits (2343), Expect = 0.000e+0
Identity = 448/611 (73.32%), Postives = 510/611 (83.47%), Query Frame = 1
Query:    1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDI 1833
            M   KQ F  VKINLASPERI+ W+EK LP+GEI+GEV E ETINYRTHKPEKGGLFCEKIFGPVK+WEC CG +K K KN   CEVC VE+ ++RVRRHRMGYI LL+PVVH+WYLKGSPS LSA+L SPVK +E V+Y   G     D  +YEQ   +       E F    + +GAEIIYD+L+KIDLK EIE NR IMF   +    E AIK+IR+FENFLTT T+PEWMV   LPVLPPGIRP++Q+ NGRFATSDLNELYRKIIIRNNRL RL+SVHAP+++I TEKRMIQE+VD LIDNGKRG K+LD++KRPLKSLADIIEGKQGRFR NLLGKR DYSGRSVIIVGPQL LNQCGLPYEMAIELFLPFII++LL QGL +SIK+AKKII+SN+ FIW+L +EIL +HPIILNRAPTLHRLGVQAFDPVL+RGRAIQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLA NNFLSP++GE  I PSQDMVLGFYYLTTQNR  L+G+NNYF+NFNEVISAY+QKQL +HS+IWVRC ++++L + LKF K I L     L IYNNLQRKE  +G+ LVQYLRTTPGRI+FNQCVNDI
Sbjct:    1 MNKNKQDFVSVKINLASPERIKAWSEKELPSGEIIGEVLESETINYRTHKPEKGGLFCEKIFGPVKNWECACGRYKQKTKNDLICEVCSVEVIDSRVRRHRMGYISLLTPVVHVWYLKGSPSFLSAILESPVKTIEQVVY---GKTFGLDFSRYEQFLFTE------EDFATEKRLEGAEIIYDQLQKIDLKTEIEMNREIMFCSNNVKSTEDAIKRIRLFENFLTTNTKPEWMVLNCLPVLPPGIRPMIQMANGRFATSDLNELYRKIIIRNNRLGRLISVHAPNMIIKTEKRMIQESVDALIDNGKRGEKVLDSHKRPLKSLADIIEGKQGRFRLNLLGKRTDYSGRSVIIVGPQLALNQCGLPYEMAIELFLPFIIHKLLFQGLVYSIKKAKKIIFSNDSFIWFLLKEILIQHPIILNRAPTLHRLGVQAFDPVLVRGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLATNNFLSPATGEANIHPSQDMVLGFYYLTTQNRMKLKGANNYFSNFNEVISAYQQKQLHVHSSIWVRCSDNIDLYTQLKFFKTIELQNGNRLHIYNNLQRKETKNGDFLVQYLRTTPGRILFNQCVNDI 602          
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A8E6D698_9PHAE (DNA-directed RNA polymerase subunit beta' n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D698_9PHAE)

HSP 1 Score: 849 bits (2194), Expect = 6.490e-305
Identity = 416/615 (67.64%), Postives = 504/615 (81.95%), Query Frame = 1
Query:    1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQ---DDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDIL 1836
            +K +K++F+YVKINLASPE+IR W EK LP GE+VGEVTE ETINYRT+KPEKGGLFCEKIFGP+K+WEC CG +     +   CE CGVE+TE++VRRHRMGYI+LL PV HIWYLKGSPS LS +L   VK LE +IY      +   D++ E+ E++     + S       G + +G   +Y+RLKKI+L+ EIE +R IM    S    E AIK+IRI ENFL+T T+PEWM+ YFLPV+PPG+RPI++LENGRFA+SDLNELYR+IIIRN RL RL+SVHAPSVV++TE RMIQE++DTLIDNGKRG+ ++D++KRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPF++++L+ QGL++SI +AKKIIY+N+ FIW L +EIL +HP+ILNRAPTLHRLGVQAFD +L+ GRAIQLHPLVC +FNADFDGDQMAVHIPLSFESQ+ETRLCLLAPNNFLSP++G+P IQP+QDMVLGFYYLT QN   L+GSN+YF +F EVI AY QKQL +HS+IWVRCP ++ LD  L   K +TL K + + IY +LQRKE   G LLVQYLRTTPGR+IFNQ VN++L
Sbjct:    3 IKKMKRQFEYVKINLASPEQIRGWGEKYLPTGEVVGEVTESETINYRTYKPEKGGLFCEKIFGPIKNWECGCGQYTQSFDDGIICENCGVEVTESKVRRHRMGYIRLLVPVAHIWYLKGSPSFLSIVLKQSVKTLEEMIYGKDLKEEGFLDEENEEDEEIINKKHFFS-------GNQLEGINSLYNRLKKINLRDEIEKSREIMLCAKSAKPFEDAIKRIRILENFLSTNTKPEWMLLYFLPVIPPGLRPIIKLENGRFASSDLNELYRRIIIRNKRLGRLMSVHAPSVVLNTETRMIQESIDTLIDNGKRGATVVDSHKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLELNQCGLPYEMAIELFLPFLMHKLIYQGLANSINKAKKIIYNNKSFIWGLLKEILGRHPVILNRAPTLHRLGVQAFDAILVTGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQIETRLCLLAPNNFLSPATGDPVIQPTQDMVLGFYYLTAQNHTNLKGSNHYFGSFEEVILAYSQKQLHIHSSIWVRCPVNIELDIKLDLPKIVTL-KDSRIKIYKDLQRKETHKGHLLVQYLRTTPGRVIFNQEVNNLL 609          
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A2I4Q2A7_9PHAE (DNA-directed RNA polymerase subunit beta' n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2A7_9PHAE)

HSP 1 Score: 848 bits (2190), Expect = 2.110e-304
Identity = 420/611 (68.74%), Postives = 492/611 (80.52%), Query Frame = 1
Query:   10 LKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNV-FFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILN 1839
            ++Q++  ++INLAS ERI++W+E  LPNGEIVGE+TE +TINYRTHKPE+ GLFC+KIFGP+K WEC CGL+K +       CEVCGV +TE+RVRRHRMGYI LL PVVHIWYL+G P+ LS +L +P+K+LE  IY   G N   D+  YE+      +  EGE      + QGAEIIY +LK++DLK EI+ NR IM    S   VE AIK++RIFENFL T+T+PEWM+F  LPVLPPG+RPIVQL+NGR ATSDLNE YRKI+IR  RL RLLSV APS++I TEKRMIQE+VD LIDNGKRG K+LD +KRPLKSLA++IEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL LNQCGLPYEMA+ELFLPF+I+++    L+ SIK AKKIIYSN+ FIWYL +EIL KHPIILNRAPTLHRLGVQAFDPVL+ GRAIQLHPLVC +FNADFDGDQMAVHIPLS ESQLETRLCLLA NNFLSP++GEP I PSQDMVLGFYYLTTQNR  L+G+NNYF+ FNEVISAY+QK+L LHS+IWVRCP  V L+  L  +K   L     L IY N Q+KE   G+ L QYLRTTPGRIIFN+ +N+ILN
Sbjct:    1 MRQEYQCIQINLASSERIKKWSEITLPNGEIVGEITESDTINYRTHKPERNGLFCQKIFGPIKDWECICGLYKNEVTQAGLICEVCGVAITESRVRRHRMGYINLLHPVVHIWYLRGIPNFLSIILKAPLKKLEETIY---GKNLSRDLTNYEEF---EEFILEGELLSAQNQLQGAEIIYKKLKRLDLKEEIKNNRLIMVSSKSTKAVEDAIKRVRIFENFLATKTKPEWMIFNVLPVLPPGLRPIVQLDNGRLATSDLNEFYRKILIRTQRLGRLLSVQAPSMIIFTEKRMIQESVDALIDNGKRGPKVLDIHKRPLKSLAEMIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLHLNQCGLPYEMAVELFLPFLIHKIFFLKLAGSIKTAKKIIYSNKSFIWYLLKEILNKHPIILNRAPTLHRLGVQAFDPVLVTGRAIQLHPLVCPAFNADFDGDQMAVHIPLSLESQLETRLCLLATNNFLSPATGEPNILPSQDMVLGFYYLTTQNRIKLKGNNNYFSTFNEVISAYQQKKLHLHSSIWVRCPKTVKLEMELVLLKIHILPNKDKLYIYQNFQKKETFDGKFLTQYLRTTPGRIIFNRRINEILN 605          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B7EVT1_9PHAE0.000e+092.23DNA-directed RNA polymerase subunit gamma n=1 Tax=... [more]
D1J788_ECTSI0.000e+089.97DNA-directed RNA polymerase subunit beta' n=8 Tax=... [more]
A0A0R6MFT6_UNDPI0.000e+083.06DNA-directed RNA polymerase subunit beta' n=25 Tax... [more]
A0A8F0F9J3_9PHAE0.000e+081.43DNA-directed RNA polymerase subunit gamma n=1 Tax=... [more]
D1GJH3_FUCVE0.000e+077.40DNA-directed RNA polymerase subunit beta' n=3 Tax=... [more]
A0A8F0JZT2_9PHAE0.000e+078.01DNA-directed RNA polymerase subunit gamma n=1 Tax=... [more]
A0A141BSD2_9PHAE0.000e+076.84DNA-directed RNA polymerase subunit beta' n=14 Tax... [more]
A0A8F0JYE1_9PHAE0.000e+073.32DNA-directed RNA polymerase subunit gamma n=1 Tax=... [more]
A0A8E6D698_9PHAE6.490e-30567.64DNA-directed RNA polymerase subunit beta' n=1 Tax=... [more]
A0A2I4Q2A7_9PHAE2.110e-30468.74DNA-directed RNA polymerase subunit beta' n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10contigL-elsbetiae_contig10:32840..34696 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1140.9
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D1J788
KEGG rclassRC02795
KEGG koko:K03046
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020
KEGG ModuleM00183
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005736,GO:0005737,GO:0009507,GO:0009536,GO:0030880,GO:0031974,GO:0031981,GO:0032991,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0055029,GO:0061695,GO:0070013,GO:1902494,GO:1990234
EggNOG free text desc.DNA-directed 5'-3' RNA polymerase activity
EggNOG OGs2QPYA@2759,COG0086@1
EC2.7.7.6
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400
Exons1
Model size1857
Cds size1857
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815232.0418992-CDS-L-elsbetiae_contig10:32839..346961622815232.0418992-CDS-L-elsbetiae_contig10:32839..34696Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 32840..34696 +
1691682783.937505-CDS-L-elsbetiae_contig10:32839..346961691682783.937505-CDS-L-elsbetiae_contig10:32839..34696Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 32840..34696 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10.17.1prot_L-elsbetiae_contig10.17.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10 32840..34696 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10.17.1

>prot_L-elsbetiae_contig10.17.1 ID=prot_L-elsbetiae_contig10.17.1|Name=mRNA_L-elsbetiae_contig10.17.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=619bp
MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHK
PEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRH
RMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDD
VEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRN
IMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIV
QLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAV
DTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRS
VIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYS
NEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLV
CASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPS
QDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRC
PNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPG
RIIFNQCVNDILNKSEVK*
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mRNA from alignment at L-elsbetiae_contig10:32840..34696+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10.17.1 ID=mRNA_L-elsbetiae_contig10.17.1|Name=mRNA_L-elsbetiae_contig10.17.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1857bp|location=Sequence derived from alignment at L-elsbetiae_contig10:32840..34696+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAAAACTTAAAACAAAAATTTGATTATGTAAAAATCAATTTAGCTTC TCCTGAACGTATTCGAGAATGGGCCGAAAAAGTTTTACCCAATGGTGAAA TAGTAGGTGAAGTAACTGAACCCGAAACAATTAATTATCGAACTCACAAA CCTGAAAAAGGTGGATTATTTTGTGAAAAAATATTTGGGCCTGTTAAAAG TTGGGAATGTACTTGTGGTTTGCATAAATATAAAGAAAAAAACGTTTTTT TTTGCGAAGTTTGCGGTGTCGAATTAACAGAAACCCGAGTCCGTAGACAT CGAATGGGCTATATTAAATTATTATCTCCAGTTGTTCACATTTGGTACTT AAAAGGGTCACCAAGTCTTTTATCAGCAATGCTAGCATCACCTGTAAAAG AGCTCGAGTCTGTTATCTATAATGGGATAGGACCTAATCAAGATGATGAT GTCGAAAAATATGAACAGGTCTTTTTATCCTCTTTTTATGATAGTGAGGG CGAAGGTTTTCATTACGGTACAAAACGTCAGGGCGCTGAAATTATCTATG ATAGATTAAAAAAAATTGATTTAAAAATAGAGATTGAAACAAATCGAAAT ATAATGTTTCTTGATACTAGTAAGACAAAGGTCGAAGTTGCAATTAAAAA AATTCGTATTTTTGAAAATTTCTTAACTACAAGGACTAGACCAGAATGGA TGGTATTCTATTTTCTCCCAGTTCTTCCGCCTGGAATTCGTCCTATCGTA CAATTAGAGAATGGCCGATTTGCTACCTCAGATTTAAACGAACTTTATCG AAAAATCATTATTAGAAATAATCGACTAAAACGATTATTATCTGTTCATG CCCCTAGTGTCGTAATCTCAACTGAAAAACGTATGATCCAAGAAGCAGTT GATACGCTTATTGATAACGGGAAACGTGGTTCTAAAATTTTAGATGCAAA TAAACGACCTTTAAAATCATTGGCTGATATTATTGAAGGTAAACAAGGTA GATTTCGTCAAAATTTATTGGGGAAACGTGTAGACTATTCAGGCCGTTCA GTAATTATTGTAGGTCCTCAACTTAAACTAAACCAATGTGGTTTACCTTA TGAGATGGCGATTGAATTATTTTTACCATTTATTATTTATAGATTACTTT CTCAGGGCTTATCTCATTCAATAAAAAGGGCTAAAAAAATTATTTATAGT AATGAACCTTTTATTTGGTATTTAACCGAAGAAATTTTGAAAAAACATCC GATTATTTTAAATCGCGCCCCAACATTGCATCGTTTAGGGGTACAAGCTT TTGATCCGGTATTAATTAGAGGACGTGCTATCCAGTTACATCCTCTTGTT TGTGCATCTTTTAATGCAGATTTTGATGGAGATCAAATGGCAGTACATAT TCCTCTATCCTTTGAATCTCAATTAGAAACAAGATTATGTTTACTAGCTC CTAATAATTTTTTATCTCCTTCTAGCGGTGAACCAACTATTCAACCTTCA CAAGATATGGTGTTGGGTTTTTATTATTTAACTACTCAGAATAGAAAAGG TTTACGAGGGTCAAATAATTATTTTGCCAATTTTAATGAAGTAATTTCTG CATATGAGCAAAAACAATTACAGCTTCATTCTGCTATATGGGTCCGTTGC CCCAATGATGTAAATCTAGATAGTCCATTAAAATTTATAAAGAAAATAAC TTTATCAAAGACTACAAATCTTGTTATTTATAATAATTTACAAAGGAAAG AGAAAATGAGTGGTGAATTATTAGTCCAGTACCTACGTACAACCCCTGGT CGTATTATCTTCAATCAATGTGTCAATGATATCTTAAATAAATCGGAGGT GAAATAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10:32840..34696+

>mRNA_L-elsbetiae_contig10.17.1 ID=mRNA_L-elsbetiae_contig10.17.1|Name=mRNA_L-elsbetiae_contig10.17.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3714bp|location=Sequence derived from alignment at L-elsbetiae_contig10:32840..34696+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAAAACTTAAAACAAAAATTTGATTATGTAAAAATCAATTTAGCTTC
TCCTGAACGTATTCGAGAATGGGCCGAAAAAGTTTTACCCAATGGTGAAA
TAGTAGGTGAAGTAACTGAACCCGAAACAATTAATTATCGAACTCACAAA
CCTGAAAAAGGTGGATTATTTTGTGAAAAAATATTTGGGCCTGTTAAAAG
TTGGGAATGTACTTGTGGTTTGCATAAATATAAAGAAAAAAACGTTTTTT
TTTGCGAAGTTTGCGGTGTCGAATTAACAGAAACCCGAGTCCGTAGACAT
CGAATGGGCTATATTAAATTATTATCTCCAGTTGTTCACATTTGGTACTT
AAAAGGGTCACCAAGTCTTTTATCAGCAATGCTAGCATCACCTGTAAAAG
AGCTCGAGTCTGTTATCTATAATGGGATAGGACCTAATCAAGATGATGAT
GTCGAAAAATATGAACAGGTCTTTTTATCCTCTTTTTATGATAGTGAGGG
CGAAGGTTTTCATTACGGTACAAAACGTCAGGGCGCTGAAATTATCTATG
ATAGATTAAAAAAAATTGATTTAAAAATAGAGATTGAAACAAATCGAAAT
ATAATGTTTCTTGATACTAGTAAGACAAAGGTCGAAGTTGCAATTAAAAA
AATTCGTATTTTTGAAAATTTCTTAACTACAAGGACTAGACCAGAATGGA
TGGTATTCTATTTTCTCCCAGTTCTTCCGCCTGGAATTCGTCCTATCGTA
CAATTAGAGAATGGCCGATTTGCTACCTCAGATTTAAACGAACTTTATCG
AAAAATCATTATTAGAAATAATCGACTAAAACGATTATTATCTGTTCATG
CCCCTAGTGTCGTAATCTCAACTGAAAAACGTATGATCCAAGAAGCAGTT
GATACGCTTATTGATAACGGGAAACGTGGTTCTAAAATTTTAGATGCAAA
TAAACGACCTTTAAAATCATTGGCTGATATTATTGAAGGTAAACAAGGTA
GATTTCGTCAAAATTTATTGGGGAAACGTGTAGACTATTCAGGCCGTTCA
GTAATTATTGTAGGTCCTCAACTTAAACTAAACCAATGTGGTTTACCTTA
TGAGATGGCGATTGAATTATTTTTACCATTTATTATTTATAGATTACTTT
CTCAGGGCTTATCTCATTCAATAAAAAGGGCTAAAAAAATTATTTATAGT
AATGAACCTTTTATTTGGTATTTAACCGAAGAAATTTTGAAAAAACATCC
GATTATTTTAAATCGCGCCCCAACATTGCATCGTTTAGGGGTACAAGCTT
TTGATCCGGTATTAATTAGAGGACGTGCTATCCAGTTACATCCTCTTGTT
TGTGCATCTTTTAATGCAGATTTTGATGGAGATCAAATGGCAGTACATAT
TCCTCTATCCTTTGAATCTCAATTAGAAACAAGATTATGTTTACTAGCTC
CTAATAATTTTTTATCTCCTTCTAGCGGTGAACCAACTATTCAACCTTCA
CAAGATATGGTGTTGGGTTTTTATTATTTAACTACTCAGAATAGAAAAGG
TTTACGAGGGTCAAATAATTATTTTGCCAATTTTAATGAAGTAATTTCTG
CATATGAGCAAAAACAATTACAGCTTCATTCTGCTATATGGGTCCGTTGC
CCCAATGATGTAAATCTAGATAGTCCATTAAAATTTATAAAGAAAATAAC
TTTATCAAAGACTACAAATCTTGTTATTTATAATAATTTACAAAGGAAAG
AGAAAATGAGTGGTGAATTATTAGTCCAGTACCTACGTACAACCCCTGGT
CGTATTATCTTCAATCAATGTGTCAATGATATCTTAAATAAATCGGAGGT
GAAATAAATGAAAAACTTAAAACAAAAATTTGATTATGTAAAAATCAATT
TAGCTTCTCCTGAACGTATTCGAGAATGGGCCGAAAAAGTTTTACCCAAT
GGTGAAATAGTAGGTGAAGTAACTGAACCCGAAACAATTAATTATCGAAC
TCACAAACCTGAAAAAGGTGGATTATTTTGTGAAAAAATATTTGGGCCTG
TTAAAAGTTGGGAATGTACTTGTGGTTTGCATAAATATAAAGAAAAAAAC
GTTTTTTTTTGCGAAGTTTGCGGTGTCGAATTAACAGAAACCCGAGTCCG
TAGACATCGAATGGGCTATATTAAATTATTATCTCCAGTTGTTCACATTT
GGTACTTAAAAGGGTCACCAAGTCTTTTATCAGCAATGCTAGCATCACCT
GTAAAAGAGCTCGAGTCTGTTATCTATAATGGGATAGGACCTAATCAAGA
TGATGATGTCGAAAAATATGAACAGGTCTTTTTATCCTCTTTTTATGATA
GTGAGGGCGAAGGTTTTCATTACGGTACAAAACGTCAGGGCGCTGAAATT
ATCTATGATAGATTAAAAAAAATTGATTTAAAAATAGAGATTGAAACAAA
TCGAAATATAATGTTTCTTGATACTAGTAAGACAAAGGTCGAAGTTGCAA
TTAAAAAAATTCGTATTTTTGAAAATTTCTTAACTACAAGGACTAGACCA
GAATGGATGGTATTCTATTTTCTCCCAGTTCTTCCGCCTGGAATTCGTCC
TATCGTACAATTAGAGAATGGCCGATTTGCTACCTCAGATTTAAACGAAC
TTTATCGAAAAATCATTATTAGAAATAATCGACTAAAACGATTATTATCT
GTTCATGCCCCTAGTGTCGTAATCTCAACTGAAAAACGTATGATCCAAGA
AGCAGTTGATACGCTTATTGATAACGGGAAACGTGGTTCTAAAATTTTAG
ATGCAAATAAACGACCTTTAAAATCATTGGCTGATATTATTGAAGGTAAA
CAAGGTAGATTTCGTCAAAATTTATTGGGGAAACGTGTAGACTATTCAGG
CCGTTCAGTAATTATTGTAGGTCCTCAACTTAAACTAAACCAATGTGGTT
TACCTTATGAGATGGCGATTGAATTATTTTTACCATTTATTATTTATAGA
TTACTTTCTCAGGGCTTATCTCATTCAATAAAAAGGGCTAAAAAAATTAT
TTATAGTAATGAACCTTTTATTTGGTATTTAACCGAAGAAATTTTGAAAA
AACATCCGATTATTTTAAATCGCGCCCCAACATTGCATCGTTTAGGGGTA
CAAGCTTTTGATCCGGTATTAATTAGAGGACGTGCTATCCAGTTACATCC
TCTTGTTTGTGCATCTTTTAATGCAGATTTTGATGGAGATCAAATGGCAG
TACATATTCCTCTATCCTTTGAATCTCAATTAGAAACAAGATTATGTTTA
CTAGCTCCTAATAATTTTTTATCTCCTTCTAGCGGTGAACCAACTATTCA
ACCTTCACAAGATATGGTGTTGGGTTTTTATTATTTAACTACTCAGAATA
GAAAAGGTTTACGAGGGTCAAATAATTATTTTGCCAATTTTAATGAAGTA
ATTTCTGCATATGAGCAAAAACAATTACAGCTTCATTCTGCTATATGGGT
CCGTTGCCCCAATGATGTAAATCTAGATAGTCCATTAAAATTTATAAAGA
AAATAACTTTATCAAAGACTACAAATCTTGTTATTTATAATAATTTACAA
AGGAAAGAGAAAATGAGTGGTGAATTATTAGTCCAGTACCTACGTACAAC
CCCTGGTCGTATTATCTTCAATCAATGTGTCAATGATATCTTAAATAAAT
CGGAGGTGAAATAA
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