prot_L-digitata_M_contig99844.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99844.2.1
Unique Nameprot_L-digitata_M_contig99844.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length167
Homology
BLAST of mRNA_L-digitata_M_contig99844.2.1 vs. uniprot
Match: A0A7C5ZUP2_9BACT (Uncharacterized protein n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A7C5ZUP2_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 1.780e-8
Identity = 56/180 (31.11%), Postives = 89/180 (49.44%), Query Frame = 0
Query:    7 GPKHVLLIGDSVAFTVGVTQSESIAA-VVAARTGATVLDASVVGYGLEDYALAYEHLMEVAKPDI--VVVMLTLND--------IQPSVQKQILSHKPSVGIARKLNDFLRPRSRTYLWIKGIFDNTAERHFRATRSSYEKA---VPEQIEPALD-----KLASGAPTVFLLGPYRYEAK 167
            G   +L++GDSV F   +  SE+I   + +      V++A V+GY   DY     + +E   PDI  VV+ + LND        I+ SV++ I   +PS    R +NDFLR RS+ YLW K    +T + +F    + Y++    V   ++P  D        + +  V+LL PY Y+ +
Sbjct:  146 GSGAILVVGDSVVFGPALEASETIPGRLQSMMPDRRVMNAGVIGYDTADYLNETRYFIE-RYPDIESVVLFICLNDVNDQSAAEIRRSVERSI-DTQPSRNPVRMVNDFLRSRSKLYLWFKNAVTDTQKTYFDFDAAFYDRGENFVAAAMQPVSDLNKYLNSLNKSLRVYLL-PYEYQLR 322          
BLAST of mRNA_L-digitata_M_contig99844.2.1 vs. uniprot
Match: A0A523KW81_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523KW81_9GAMM)

HSP 1 Score: 54.3 bits (129), Expect = 1.440e-5
Identity = 45/165 (27.27%), Postives = 82/165 (49.70%), Query Frame = 0
Query:   11 VLLIGDSVAFTVGVTQSESIAAVVA-ARTGATVLDASVVGYGLEDYALAYEHLMEVAKP------DIVVVMLTLNDIQPSVQKQI---LSH---KPSV-------------GIARKLNDFLRPRSRTYLWIKGIFDNTAERHFRATRSSYEKAVPEQIEPALDKL 149
            +L++GDSVAF VGV   +++AA +A A       + +V+GYG+ DY     ++  V  P      + V+V+  LND+      +I   ++H   KP+V              + R  N +LR  S  Y+W++G   +   R++++  ++Y++   E +   LD +
Sbjct:   95 LLILGDSVAFGVGVEFEQTVAARLASAFPEFHTYNTAVIGYGVNDY----HNVTRVVFPRYADTINQVLVIFCLNDVSVVSAAEIKAKVAHAIDKPAVLTAGVDVQSLKDISVIRSANSYLRAHSSLYVWLRGFVTDPQTRYWQSELANYQRLSDEALAEILDPI 255          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99844.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7C5ZUP2_9BACT1.780e-831.11Uncharacterized protein n=1 Tax=Blastocatellia bac... [more]
A0A523KW81_9GAMM1.440e-527.27Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036514SGNH hydrolase superfamilyGENE3D3.40.50.1110SGNH hydrolasecoord: 9..166
e-value: 2.3E-8
score: 36.0
NoneNo IPR availableCDDcd00229SGNH_hydrolasecoord: 11..88
e-value: 3.37483E-7
score: 45.8662
NoneNo IPR availableSUPERFAMILY52266SGNH hydrolasecoord: 7..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99844contigL-digitata_M_contig99844:449..949 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99844.2.1mRNA_L-digitata_M_contig99844.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99844 449..949 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99844.2.1 ID=prot_L-digitata_M_contig99844.2.1|Name=mRNA_L-digitata_M_contig99844.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=167bp
MRVYGEGPKHVLLIGDSVAFTVGVTQSESIAAVVAARTGATVLDASVVGY
GLEDYALAYEHLMEVAKPDIVVVMLTLNDIQPSVQKQILSHKPSVGIARK
LNDFLRPRSRTYLWIKGIFDNTAERHFRATRSSYEKAVPEQIEPALDKLA
SGAPTVFLLGPYRYEAK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036514SGNH_hydro_sf