mRNA_L-digitata_M_contig99603.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig99603.1.1
Unique NamemRNA_L-digitata_M_contig99603.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A838IHE4_9DELT (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Bradymonadaceae bacterium TaxID=2740543 RepID=A0A838IHE4_9DELT)

HSP 1 Score: 337 bits (864), Expect = 8.480e-114
Identity = 170/260 (65.38%), Postives = 207/260 (79.62%), Query Frame = 1
Query:    4 PLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHALWD 783
            P+A+TIAGSDSG GAG QADLKTFAA  V GTSVLT+ITAQNTVGV  + +L   ++RAQY AV +DL P AAK GA+GS   IG V ELL+++PID LVVDPVM++KHGE L+ +   + L   L++ A LV PNRHEA  +TGR V+ P+SMKDAAK IFD GARNVLIKG HL++IVRD++YDG+GFVEFGADR+DS  +HGSGCV +A+I ARL  GD LLAAIE +REFIS AIE+AP++G GI+PVNP H LW+
Sbjct:   22 PIALTIAGSDSGGGAGIQADLKTFAALEVFGTSVLTMITAQNTVGVSEICVLDEQILRAQYNAVMTDLRPWAAKTGAMGSNTTIGIVAELLEEHPIDKLVVDPVMISKHGEQLLPDDACKALRERLMDKAFLVMPNRHEAAKLTGRTVEGPTSMKDAAKRIFDFGARNVLIKGGHLEKIVRDFYYDGSGFVEFGADRVDSGRLHGSGCVYAAAIVARLCLGDELLAAIEFSREFISGAIEKAPKLGAGISPVNPMHRLWE 281          
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A4Y6Q353_9DELT (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=2 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6Q353_9DELT)

HSP 1 Score: 332 bits (851), Expect = 5.690e-112
Identity = 173/259 (66.80%), Postives = 201/259 (77.61%), Query Frame = 1
Query:    4 PLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHALW 780
            P+A+TIAGSDSG GAG QADLK FAA  VHG SVLTL+TAQNT GV  + MLP  +VRAQ+EAV  DL PAAAK GALGSEA+IG V E L + PID LVVDPV+V+KHG+PLM E  QR +   +LE A+LVTPNRHEAEA+ GR V + +SMK+AAK I+D G ++VLIKG+H D+IVRD F+DGTGF+EFGADRIDS  VHGSGCV SA ITARL+  D L  AI   R+FIS AIE AP +G GIAPVNP H  W
Sbjct:   12 PVALTIAGSDSGGGAGIQADLKAFAACGVHGASVLTLVTAQNTQGVSGLEMLPEHLVRAQFEAVMGDLRPAAAKTGALGSEAVIGTVAEALSERPIDKLVVDPVIVSKHGDPLMPERAQRMIRDRMLEGAMLVTPNRHEAEALCGREVGNVASMKEAAKRIYDFGVQHVLIKGAHFDKIVRDIFFDGTGFIEFGADRIDSSRVHGSGCVYSAVITARLALEDELPEAIGFARDFISKAIENAPLVGRGIAPVNPMHEYW 270          
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A5C6UPA3_9DELT (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=5 Tax=Bradymonadales TaxID=1779134 RepID=A0A5C6UPA3_9DELT)

HSP 1 Score: 328 bits (841), Expect = 2.650e-110
Identity = 170/261 (65.13%), Postives = 202/261 (77.39%), Query Frame = 1
Query:    1 PPLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRG-VDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHALW 780
            P +A+TIAGSDSG GAG QADLKTFAA  V GTSVLTL+TAQNTVGV  V M+  A+VRAQ +AV  DL P AAK GALGSEAMIGCV+E L+D+P++ LVVDPVM++KHGEPLM  +    L   +L HAL+VTPNR EA  ++G   V+S   MK+AAK +   GARNV+IKG H DRIVRD FYDG+GFVEFGADR+DS  VHGSGC  SA+I ARLS GD+L+ A+   REFIS AIE+AP+IG GI+PVNP H +W
Sbjct:   20 PAVALTIAGSDSGGGAGIQADLKTFAACGVFGTSVLTLLTAQNTVGVSSVEMVSEAMVRAQLDAVLGDLKPTAAKTGALGSEAMIGCVVEYLEDHPMERLVVDPVMISKHGEPLMPPSAFVALREKMLRHALIVTPNRFEAGNLSGMNEVESLQDMKEAAKRLHGAGARNVVIKGGHFDRIVRDVFYDGSGFVEFGADRVDSGRVHGSGCTFSAAICARLSRGDALVDAVAFAREFISEAIEKAPKIGEGISPVNPMHGVW 280          
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A328C2Z0_9DELT (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Lujinxingia litoralis TaxID=2211119 RepID=A0A328C2Z0_9DELT)

HSP 1 Score: 322 bits (826), Expect = 5.040e-108
Identity = 167/261 (63.98%), Postives = 203/261 (77.78%), Query Frame = 1
Query:    1 PPLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRG-VDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHALW 780
            P +A+TIAGSDSG GAG QADLKTFAA  V GTS LTL+TAQNT GV LV M   A+VRAQ +AV  DL P+AAK GALG+EAMI  ++E L+D+PI++LVVDPVM++KHGEPLM E+    L   LL  AL+VTPNR EA  +TG G V+S + MK+AAK +F  GAR+V+IKG H DRIVRD FYDG+GFVEFGADR+DS+ VHGSGC  SA+I ARL+  D+L+ A+   REFIS AIE+APR+G GI+PVNP H +W
Sbjct:   20 PAVALTIAGSDSGGGAGIQADLKTFAACGVFGTSALTLLTAQNTQGVTLVEMASEAMVRAQLDAVLGDLKPSAAKTGALGTEAMISFLVEYLEDHPIESLVVDPVMISKHGEPLMPESAFASLREKLLPRALIVTPNRFEAAHLTGMGEVESLAEMKEAAKRLFGAGARHVVIKGGHFDRIVRDVFYDGSGFVEFGADRVDSKRVHGSGCTFSAAICARLARQDALVDAVAFAREFISEAIEKAPRLGEGISPVNPMHGVW 280          
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A5B8XSF5_9DELT (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Bradymonadales bacterium V1718 TaxID=2600177 RepID=A0A5B8XSF5_9DELT)

HSP 1 Score: 320 bits (821), Expect = 2.710e-107
Identity = 165/262 (62.98%), Postives = 199/262 (75.95%), Query Frame = 1
Query:    1 PPLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHALWDS 786
            P +A+TIAGSDSG GAG QADLKTFAA +V GTSVLTL+TAQNT GV  V MLP AV+RAQ+EAV SDL P AAK GALG++ +IG V E+L D PI+ LVVDPVMV+KHG+PLM E   +     ++  A+++TPNR EA A+ GR VD    M++AAK IFD+GA  VLIKG HLD IVRD  YDGTGF EFGADRI S  VHGSGC  SA+ITA+L+ G ++ AA+E  R+FI+ AI  AP IG GIAPVNP H++W+S
Sbjct:   18 PAVALTIAGSDSGGGAGIQADLKTFAASKVFGTSVLTLVTAQNTQGVTAVEMLPDAVIRAQFEAVMSDLNPTAAKTGALGNDRVIGLVAEMLDDRPIEKLVVDPVMVSKHGDPLMPEQAVKAFIALMVPRAMIITPNRFEARALIGRDVDDVRDMQEAAKRIFDMGAPAVLIKGGHLDHIVRDILYDGTGFTEFGADRIRSPRVHGSGCTFSAAITAKLAEGATIEAALEYARDFITKAILMAPEIGEGIAPVNPMHSVWNS 279          
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A2Z4FPN7_9DELT (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Bradymonas sediminis TaxID=1548548 RepID=A0A2Z4FPN7_9DELT)

HSP 1 Score: 310 bits (794), Expect = 4.320e-103
Identity = 160/259 (61.78%), Postives = 197/259 (76.06%), Query Frame = 1
Query:    4 PLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHALW 780
            P+A+TIAGSD G GAG QADLKTF+A  VHGTS++TLITAQNT+GV  V +L   ++RAQ+EA+ SD+   AAK GALG E  +  V E L+++PI+ LVVDPVM++KHG+ LM    Q+ +   LLE ALL TPNR EAEA++G  V + +SMKDAA+ I D G +NVLIKG+H D+IVRD FYDG  F+EFGADRIDS  VHGSGC  SA+ITARL+ GD+L+AAIE  R+FIS AI  APRIG GI+PVNP H  W
Sbjct:   23 PIALTIAGSDCGGGAGLQADLKTFSACGVHGTSIVTLITAQNTLGVSAVEVLSKPLIRAQFEALSSDVRALAAKTGALGDERGVKIVAECLKEWPIEKLVVDPVMMSKHGDALMPPPAQKLVRDYLLEGALLCTPNRFEAEALSGHEVGNVASMKDAARRIHDFGVKNVLIKGAHFDKIVRDVFYDGRDFLEFGADRIDSDRVHGSGCTFSAAITARLARGDALVAAIEYARKFISAAIANAPRIGQGISPVNPMHEYW 281          
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A523J085_9DELT (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A523J085_9DELT)

HSP 1 Score: 240 bits (612), Expect = 7.670e-76
Identity = 131/254 (51.57%), Postives = 166/254 (65.35%), Query Frame = 1
Query:    4 PLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHLD-RIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVN 762
            P A+TIAGSDSG GAG QADLKTF    V+GTS LTLITAQNT+GV  VH+LP+ +VR Q EAV  D    AAK GALGS  ++  V   + +Y +  LVVDPVM++KHG PL++      L + L+  A L+TPN HEA A+ G  VDS + M+DAA+ + DLG   VL+KG HL  +   D  YDG  F    A R+D+ H HGSGC  SA+ITA L+ G++LL A+   + FI+ AI  AP +G G  PVN
Sbjct:    6 PTALTIAGSDSGGGAGIQADLKTFQRFGVYGTSALTLITAQNTLGVQEVHLLPLELVRRQIEAVAKDFDVGAAKTGALGSVELVETVAWAVDEYALPKLVVDPVMISKHGNPLLAPEAVASLKQQLIPKASLITPNLHEAAALLGSSVDSEARMRDAARALHDLGPGAVLLKGGHLPGKEAVDLLYDGHEFERLAATRVDTPHTHGSGCTHSAAITALLARGETLLEAVRQAKAFITRAISSAPGLGGGHGPVN 259          
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A3C1NJF1_9HYPH (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3C1NJF1_9HYPH)

HSP 1 Score: 231 bits (589), Expect = 2.100e-72
Identity = 129/253 (50.99%), Postives = 160/253 (63.24%), Query Frame = 1
Query:    4 PLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVN 762
            P+A+TIAGSD   GAG QADLKTF    V+G SVLTL+T QNT  VD V  L    V AQ ++V  D+ P AAK GALG+  +I  +      +    LVVDPVM++KHG PL+ E  Q+ L R LL HA LVTPN +EA  ++GR +  PSSM+ AAK I  LG R VLIKG HL     D  Y    F  F A RI++ H HG+GC  SA+ITA L+ G  L+AAIET + +I+ AIE  P +G G+ PVN
Sbjct:    3 PIALTIAGSDPSGGAGIQADLKTFHQRNVYGMSVLTLLTVQNTRSVDAVEPLAPGFVLAQLDSVLEDIPPHAAKTGALGTREIIEAIARRAAHFSFP-LVVDPVMISKHGAPLLPEEAQKTLVRELLPHATLVTPNLYEASVLSGRQIKDPSSMESAAKDIAQLGPRAVLIKGGHLSGEATDLLYADGLFHLFSAPRIETAHTHGTGCTYSAAITAELAKGVGLVAAIETAKRYITRAIETNPGLGRGVGPVN 254          
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A7K0A465_9ACTN (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K0A465_9ACTN)

HSP 1 Score: 231 bits (590), Expect = 2.240e-72
Identity = 133/263 (50.57%), Postives = 167/263 (63.50%), Query Frame = 1
Query:    4 PLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHL--DRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHALWDS 786
            P A+TIAGSDSG GAG QADLKTF A   HG S +T +TAQNT GV  +H +P   V AQ +AV +D+   AAK G L S  +I  V   ++ + I  LVVDPV V   G  L+ +     L   LL  AL+VTPN  EA  +TGR +DS  +MKDAA  I DLG R VL+KG HL  +R V D F+DGT   E  A R D+   HG+GCV+SA+I ARL+HGD L+ A++T +EF++ AIER  +IG+G  PVNP    W S
Sbjct:   12 PRALTIAGSDSGGGAGIQADLKTFMALGCHGMSAVTALTAQNTRGVTAIHDVPPDFVEAQIDAVVTDIGVDAAKTGMLSSGEIIEGVARAVERHGISNLVVDPVSVATSGAQLLRDDAVAALMERLLPRALIVTPNLQEAALLTGRAIDSTDAMKDAATEIRDLGPRTVLVKGGHLHEERAV-DVFFDGTTHHEIAAPRFDTEDTHGTGCVLSAAIAARLAHGDRLIDAVQTAKEFVTGAIERGLKIGSGYGPVNP---AWGS 270          
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A7V9N290_9CHLR (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9N290_9CHLR)

HSP 1 Score: 230 bits (587), Expect = 7.920e-72
Identity = 128/259 (49.42%), Postives = 174/259 (67.18%), Query Frame = 1
Query:    1 PPLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHAL 777
            P  AMTIAGSDSGAGAG QADLKTFAA  V+GTSV+T +TAQNT GV  V  +P  V+  Q ++V+ D+   A K G L + +++  V   L+ + + ALVVDPVMV K GEPL+ +     L ++LL  AL+VTPN  EAE ++G  +DSP + +DAA+ I +LG R V++KG HL     D  YDG  F  F A+RID+++ HG+GC  SA+ITA L+ G + LAAIE  + +++ AI  +  IG+G +PVN FHA+
Sbjct:   10 PVKAMTIAGSDSGAGAGIQADLKTFAALDVYGTSVVTAVTAQNTRGVFAVAEVPEEVIAIQIDSVFEDIGADAVKTGMLSAASIVEIVASRLEAWGVAALVVDPVMVAKGGEPLLQQNAVAALKQHLLPLALVVTPNIPEAEVLSGIAIDSPRAARDAARAIAELGPRYVVVKGGHLAGNATDIVYDGQTFTAFSAERIDTQNTHGTGCTFSAAITAHLACGLAPLAAIEAAKVWLTGAIRESYAIGDGHSPVNHFHAI 268          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A838IHE4_9DELT8.480e-11465.38Bifunctional hydroxymethylpyrimidine kinase/phosph... [more]
A0A4Y6Q353_9DELT5.690e-11266.80Bifunctional hydroxymethylpyrimidine kinase/phosph... [more]
A0A5C6UPA3_9DELT2.650e-11065.13Bifunctional hydroxymethylpyrimidine kinase/phosph... [more]
A0A328C2Z0_9DELT5.040e-10863.98Bifunctional hydroxymethylpyrimidine kinase/phosph... [more]
A0A5B8XSF5_9DELT2.710e-10762.98Bifunctional hydroxymethylpyrimidine kinase/phosph... [more]
A0A2Z4FPN7_9DELT4.320e-10361.78Bifunctional hydroxymethylpyrimidine kinase/phosph... [more]
A0A523J085_9DELT7.670e-7651.57Bifunctional hydroxymethylpyrimidine kinase/phosph... [more]
A0A3C1NJF1_9HYPH2.100e-7250.99Bifunctional hydroxymethylpyrimidine kinase/phosph... [more]
A0A7K0A465_9ACTN2.240e-7250.57Bifunctional hydroxymethylpyrimidine kinase/phosph... [more]
A0A7V9N290_9CHLR7.920e-7249.42Bifunctional hydroxymethylpyrimidine kinase/phosph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99603contigL-digitata_M_contig99603:17..805 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog671143.DAMO_0715
Preferred namethiD
PFAMsPhos_pyr_kin
Model size789
Max annot lvl2|Bacteria
KEGG rclassRC00002,RC00017,RC00224,RC03251,RC03252,RC03255,RC03397
KEGG koko:K00941,ko:K03147,ko:K21219
KEGG ReactionR03223,R03471,R03472,R04509,R10712
KEGG Pathwayko00730,ko01100,map00730,map01100
KEGG ModuleM00127
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0040007
Exons1
Evalue3.24e-71
EggNOG OGsCOG0351@1|root,COG0351@2|Bacteria,2NP3M@2323|unclassified Bacteria
EC2.5.1.3,2.7.1.49,2.7.4.7,4.1.99.17
DescriptionPhosphomethylpyrimidine kinase
Cds size777
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682408655.293617-UTR-L-digitata_M_contig99603:16..281682408655.293617-UTR-L-digitata_M_contig99603:16..28Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig99603 17..28 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682408655.307639-CDS-L-digitata_M_contig99603:28..8051682408655.307639-CDS-L-digitata_M_contig99603:28..805Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig99603 29..805 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99603.1.1prot_L-digitata_M_contig99603.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig99603 29..805 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig99603.1.1

>prot_L-digitata_M_contig99603.1.1 ID=prot_L-digitata_M_contig99603.1.1|Name=mRNA_L-digitata_M_contig99603.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=259bp
MTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLP
VAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDP
VMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSS
MKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHV
HGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVN
PFHALWDS*
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mRNA from alignment at L-digitata_M_contig99603:17..805+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig99603.1.1 ID=mRNA_L-digitata_M_contig99603.1.1|Name=mRNA_L-digitata_M_contig99603.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=789bp|location=Sequence derived from alignment at L-digitata_M_contig99603:17..805+ (Laminaria digitata LdigPH10_18mv male)
CCGCCGCTGGCGATGACGATCGCCGGATCGGACAGCGGCGCGGGCGCGGG CGCGCAAGCAGACCTGAAGACCTTCGCCGCGCACCGCGTGCACGGCACGA GCGTGCTGACCCTGATCACGGCCCAGAACACGGTGGGCGTCGACCTCGTG CATATGCTCCCCGTCGCGGTCGTGCGCGCGCAATATGAGGCCGTGTATTC GGACCTGACGCCCGCGGCGGCGAAGCTCGGCGCGCTCGGCAGCGAGGCGA TGATCGGGTGCGTGATCGAGCTCTTGCAAGACTATCCGATCGACGCGCTC GTGGTCGATCCGGTGATGGTCACCAAGCATGGCGAGCCGCTGATGTCCGA GGCGACCCAGCGCTTTCTGGCCAGGAACTTGTTGGAGCACGCGCTGCTCG TGACCCCGAACAGGCACGAGGCCGAGGCGATCACAGGTCGCGGCGTGGAC AGCCCCTCCTCGATGAAGGACGCCGCCAAGCACATCTTCGATCTGGGCGC GCGCAATGTCTTGATCAAGGGGAGCCACCTCGATCGCATCGTGCGTGATT ACTTCTATGATGGGACGGGGTTCGTGGAGTTTGGCGCAGATCGCATCGAC TCGCGCCACGTGCACGGCTCGGGCTGTGTGATGTCCGCCTCGATCACGGC GAGGCTTTCGCACGGAGACAGCTTGCTCGCCGCGATCGAGACCACGCGCG AGTTCATCTCGAACGCCATCGAGCGCGCGCCTCGCATCGGCAATGGCATC GCCCCGGTGAACCCCTTCCACGCGCTCTGGGATTCCTGA
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Coding sequence (CDS) from alignment at L-digitata_M_contig99603:17..805+

>mRNA_L-digitata_M_contig99603.1.1 ID=mRNA_L-digitata_M_contig99603.1.1|Name=mRNA_L-digitata_M_contig99603.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=777bp|location=Sequence derived from alignment at L-digitata_M_contig99603:17..805+ (Laminaria digitata LdigPH10_18mv male)
ATGACGATCGCCGGATCGGACAGCGGCGCGGGCGCGGGCGCGCAAGCAGA
CCTGAAGACCTTCGCCGCGCACCGCGTGCACGGCACGAGCGTGCTGACCC
TGATCACGGCCCAGAACACGGTGGGCGTCGACCTCGTGCATATGCTCCCC
GTCGCGGTCGTGCGCGCGCAATATGAGGCCGTGTATTCGGACCTGACGCC
CGCGGCGGCGAAGCTCGGCGCGCTCGGCAGCGAGGCGATGATCGGGTGCG
TGATCGAGCTCTTGCAAGACTATCCGATCGACGCGCTCGTGGTCGATCCG
GTGATGGTCACCAAGCATGGCGAGCCGCTGATGTCCGAGGCGACCCAGCG
CTTTCTGGCCAGGAACTTGTTGGAGCACGCGCTGCTCGTGACCCCGAACA
GGCACGAGGCCGAGGCGATCACAGGTCGCGGCGTGGACAGCCCCTCCTCG
ATGAAGGACGCCGCCAAGCACATCTTCGATCTGGGCGCGCGCAATGTCTT
GATCAAGGGGAGCCACCTCGATCGCATCGTGCGTGATTACTTCTATGATG
GGACGGGGTTCGTGGAGTTTGGCGCAGATCGCATCGACTCGCGCCACGTG
CACGGCTCGGGCTGTGTGATGTCCGCCTCGATCACGGCGAGGCTTTCGCA
CGGAGACAGCTTGCTCGCCGCGATCGAGACCACGCGCGAGTTCATCTCGA
ACGCCATCGAGCGCGCGCCTCGCATCGGCAATGGCATCGCCCCGGTGAAC
CCCTTCCACGCGCTCTGGGATTCCTGA
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