prot_L-digitata_M_contig98545.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig98545.1.1
Unique Nameprot_L-digitata_M_contig98545.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length105
Homology
BLAST of mRNA_L-digitata_M_contig98545.1.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 99.4 bits (246), Expect = 4.560e-22
Identity = 50/106 (47.17%), Postives = 70/106 (66.04%), Query Frame = 0
Query:    5 PKNHGEAMASAQASEWQASMERELASMSKHDVYELIPAPKGRQIIGSMWVFKVK--PDGL---YNSRFCAQGFSQVAGTDFGSTYAPVCRIPSVRIVLAIAASHDW 105
            P ++ +AM+   A+EW+ + E EL    +  V+E +P P+ R+IIGS WVFK K  PDG    Y +R  AQGFSQV G D+  T+APV +  S+R++LA+AA HDW
Sbjct:  995 PLSYVDAMSQEDAAEWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDW 1100          
BLAST of mRNA_L-digitata_M_contig98545.1.1 vs. uniprot
Match: A0A6H5KAG6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG6_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 6.140e-22
Identity = 48/104 (46.15%), Postives = 71/104 (68.27%), Query Frame = 0
Query:    5 PKNHGEAMASAQASEWQASMERELASMSKHDVYELIPA---PKGRQIIGSMWVFKVKPDGLYNSRFCAQGFSQVAGTDFGSTYAPVCRIPSVRIVLAIAASHDW 105
            P  + +AM S Q++EW+ +M +ELAS+  HDV +LIP    P G  +IG+ WV++VK DG + +R   QG++Q  G D  +T+APVC+I S R++LAIAA+  W
Sbjct:  644 PNTYKQAMNSPQSTEWEQAMLKELASLDDHDVADLIPVSSVPAGCSVIGTRWVYRVKTDGRFKARVVVQGWAQQHGIDCFTTFAPVCKIGSQRLLLAIAAAQGW 747          
BLAST of mRNA_L-digitata_M_contig98545.1.1 vs. uniprot
Match: A0A0C9YUU3_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Pisolithus microcarpus 441 TaxID=765257 RepID=A0A0C9YUU3_9AGAM)

HSP 1 Score: 98.6 bits (244), Expect = 8.470e-22
Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = 0
Query:    1 VSFTPKNHGEAMASAQASEWQASMERELASMSKHDVYELIPAPKGRQIIGSMWVFKVKPDGL-----YNSRFCAQGFSQVAGTDFGSTYAPVCRIPSVRIVLAIAASHDW 105
            +S  P  + EAM  +    W+ +MEREL  M +  V++L+  P  R+++G+ WVF+ KP  L     Y +R  AQGFSQV G DF  TYAPV R  SV++++A+AA HDW
Sbjct:  951 MSVPPATYEEAMKRSDCIGWREAMERELGMMKEMGVWKLVEPPPDRKLVGNRWVFEFKPVNLKGGSKYKARLVAQGFSQVPGIDFHQTYAPVARQVSVKLLVALAAQHDW 1060          
BLAST of mRNA_L-digitata_M_contig98545.1.1 vs. uniprot
Match: A0A7S4MPX6_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MPX6_9EUKA)

HSP 1 Score: 96.3 bits (238), Expect = 5.400e-21
Identity = 45/103 (43.69%), Postives = 66/103 (64.08%), Query Frame = 0
Query:    3 FTPKNHGEAMASAQASEWQASMERELASMSKHDVYELIPAPKGRQIIGSMWVFKVKPDG-----LYNSRFCAQGFSQVAGTDFGSTYAPVCRIPSVRIVLAIA 100
            FTP    EA     +++WQ +M  EL S+ +H  +  +P P GR+IIG+ W++ +K D       Y +RF AQGFSQ+AG D+G T+APV R+ S+R++L IA
Sbjct:  514 FTPATLAEAKRCPDSAKWQQAMNSELKSLERHGTFSTVPRPSGRKIIGTKWIYSIKRDANGNPIRYKARFVAQGFSQIAGVDYGDTFAPVGRMESLRVLLHIA 616          
BLAST of mRNA_L-digitata_M_contig98545.1.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 96.3 bits (238), Expect = 5.480e-21
Identity = 43/106 (40.57%), Postives = 69/106 (65.09%), Query Frame = 0
Query:    5 PKNHGEAMASAQASEWQASMERELASMSKHDVYELIPAPKGRQIIGSMWVFKVKPDG-----LYNSRFCAQGFSQVAGTDFGSTYAPVCRIPSVRIVLAIAASHDW 105
            P++  EAM S    +WQ ++E+E+ ++  H  Y+L+  P+   ++GS +VF++K +       Y +R  AQGFSQ+ G DF  T+APV ++ S+RI+LA+AA HDW
Sbjct:  960 PRSLEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDW 1065          
BLAST of mRNA_L-digitata_M_contig98545.1.1 vs. uniprot
Match: A0A401GTF6_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GTF6_9APHY)

HSP 1 Score: 95.9 bits (237), Expect = 7.460e-21
Identity = 43/106 (40.57%), Postives = 69/106 (65.09%), Query Frame = 0
Query:    5 PKNHGEAMASAQASEWQASMERELASMSKHDVYELIPAPKGRQIIGSMWVFKVKPDG-----LYNSRFCAQGFSQVAGTDFGSTYAPVCRIPSVRIVLAIAASHDW 105
            P++  EAM S    +WQ ++E+E+ ++  H  Y+L+  P+   I+GS ++F++K +       Y +R  AQGF+QV G DF  T+APV ++ S+RI+LA+AA HDW
Sbjct:  929 PRSLEEAMQSPDWPQWQQAIEKEMQNLRDHHTYDLVEPPENTNIVGSKFIFRIKHNANGEIESYKARLVAQGFTQVPGVDFNDTFAPVAKLASIRIILALAARHDW 1034          
BLAST of mRNA_L-digitata_M_contig98545.1.1 vs. uniprot
Match: A0A6H5JLG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG1_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 8.540e-21
Identity = 40/97 (41.24%), Postives = 62/97 (63.92%), Query Frame = 0
Query:   12 MASAQASEWQASMERELASMSKHDVYELIP---APKGRQIIGSMWVFKVKPDGLYNSRFCAQGFSQVAGTDFGSTYAPVCRIPSVRIVLAIAASHDW 105
            M+S Q  EW+ +  +E+ ++ KH+VY L+P    PKG +I+G+ +VFK   DG + +R    G+ Q  G D+G +YAPVCRI S+R+  AI   ++W
Sbjct:    1 MSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKNLDGRFKARLVVGGYRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNW 97          
BLAST of mRNA_L-digitata_M_contig98545.1.1 vs. uniprot
Match: A0A6H5KS50_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS50_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.330e-20
Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 0
Query:    5 PKNHGEAMASAQASEWQASMERELASMSKHDVYELIP---APKGRQIIGSMWVFKVKPDGLYNSRFCAQGFSQVAGTDFGSTYAPVCRIPSVRIVLAIAASHDW 105
            P  + EAM+S Q  EW+ +  +E+ ++ KH+VY L+P    PKG QI+G+ +VF  K DG + +R    G  Q  G D+G +YAPVCRI S+R+  AI   ++W
Sbjct:  285 PNTYDEAMSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEQILGTKFVFTKKLDGRFKARLVVGGHRQAPGQDYGRSYAPVCRIGSIRMTCAIGCHNNW 388          
BLAST of mRNA_L-digitata_M_contig98545.1.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.350e-20
Identity = 44/104 (42.31%), Postives = 66/104 (63.46%), Query Frame = 0
Query:    5 PKNHGEAMASAQASEWQASMERELASMSKHDVYELIP---APKGRQIIGSMWVFKVKPDGLYNSRFCAQGFSQVAGTDFGSTYAPVCRIPSVRIVLAIAASHDW 105
            P  + EAM+S Q  EW+ +  +E+ ++ KH+VY L+P    PKG +I+G+ +VFK K DG + +R    G  Q  G D+G +YAPVCRI S+R+  AI   ++W
Sbjct:  567 PNTYDEAMSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNW 670          
BLAST of mRNA_L-digitata_M_contig98545.1.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.360e-20
Identity = 44/104 (42.31%), Postives = 66/104 (63.46%), Query Frame = 0
Query:    5 PKNHGEAMASAQASEWQASMERELASMSKHDVYELIP---APKGRQIIGSMWVFKVKPDGLYNSRFCAQGFSQVAGTDFGSTYAPVCRIPSVRIVLAIAASHDW 105
            P  + EAM+S Q  EW+ +  +E+ ++ KH+VY L+P    PKG +I+G+ +VFK K DG + +R    G  Q  G D+G +YAPVCRI S+R+  AI   ++W
Sbjct:  342 PNTYDEAMSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNW 445          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98545.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C2WN23_AMAMK4.560e-2247.17Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KAG6_9PHAE6.140e-2246.15Integrase catalytic domain-containing protein n=1 ... [more]
A0A0C9YUU3_9AGAM8.470e-2244.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7S4MPX6_9EUKA5.400e-2143.69Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A401GQU1_9APHY5.480e-2140.57Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A401GTF6_9APHY7.460e-2140.57Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JLG1_9PHAE8.540e-2141.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KS50_9PHAE1.330e-2042.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K500_9PHAE1.350e-2042.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KE92_9PHAE1.360e-2042.31Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 35..105
e-value: 1.3E-17
score: 64.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98545contigL-digitata_M_contig98545:5..319 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98545.1.1mRNA_L-digitata_M_contig98545.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig98545 5..319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig98545.1.1 ID=prot_L-digitata_M_contig98545.1.1|Name=mRNA_L-digitata_M_contig98545.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=105bp
VSFTPKNHGEAMASAQASEWQASMERELASMSKHDVYELIPAPKGRQIIG
SMWVFKVKPDGLYNSRFCAQGFSQVAGTDFGSTYAPVCRIPSVRIVLAIA
ASHDW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2