mRNA_L-digitata_M_contig98306.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig98306.1.1
Unique NamemRNA_L-digitata_M_contig98306.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig98306.1.1 vs. uniprot
Match: A0A2E8XNQ7_9PROT (Aminotransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XNQ7_9PROT)

HSP 1 Score: 403 bits (1035), Expect = 1.930e-138
Identity = 187/247 (75.71%), Postives = 216/247 (87.45%), Query Frame = 1
Query:    1 LGGDPVVIETRLEDRFQPTPELLAQVEGGLDGLIVASPSNPTGTMLGDTEIAELTQYCRENGIRFISDEIYHGITYGHESVTALTHDPDAVIINSFSKYFSMTGWRLGWLIIPPEMTRSVECLAQNLFISPPTLSQHAALAAFDSHDELRDNISRYARNREILLRELPKAGFDRLAPADGAFYIYADVGHMTNDSAEFCRRMLTEAQVAATPGLDFDPYRGNTYIRFSFAGSEDDMTRAVERLRGWR 741
            LG +PVV ETRL DR+QPTP LL++    LDGLIVASPSNPTGTM+G  E+A LT +CR+ G+RFISDEIYHGITYGHESVTAL +D +AVIINSFSKYFSMTGWRLGW+I+P  M RSVECL QNLFISPPTLSQHAA+AAFDSHDELR  +++YARNREILL ELPK GFD+LAPADGAFY+YADV  +TNDS +FCRRML EA+VA TPGLDFDPYRGN+++RFSFAG+EDDM +A++RL  WR
Sbjct:  135 LGIEPVVFETRLADRYQPTPGLLSERAADLDGLIVASPSNPTGTMIGGAEMAALTAHCRDRGVRFISDEIYHGITYGHESVTALAYDDEAVIINSFSKYFSMTGWRLGWMIVPDSMLRSVECLTQNLFISPPTLSQHAAVAAFDSHDELRAKVAKYARNREILLSELPKVGFDKLAPADGAFYVYADVAQLTNDSPDFCRRMLAEARVATTPGLDFDPYRGNSFVRFSFAGTEDDMRQAIDRLGDWR 381          
BLAST of mRNA_L-digitata_M_contig98306.1.1 vs. uniprot
Match: A0A2E7PHR9_9PROT (Aminotransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PHR9_9PROT)

HSP 1 Score: 384 bits (986), Expect = 5.000e-131
Identity = 180/247 (72.87%), Postives = 209/247 (84.62%), Query Frame = 1
Query:    1 LGGDPVVIETRLEDRFQPTPELLAQVEGGLDGLIVASPSNPTGTMLGDTEIAELTQYCRENGIRFISDEIYHGITYGHESVTALTHDPDAVIINSFSKYFSMTGWRLGWLIIPPEMTRSVECLAQNLFISPPTLSQHAALAAFDSHDELRDNISRYARNREILLRELPKAGFDRLAPADGAFYIYADVGHMTNDSAEFCRRMLTEAQVAATPGLDFDPYRGNTYIRFSFAGSEDDMTRAVERLRGWR 741
            LG  PVV+ETR EDRFQPTP +LA   G L GLIVASPSNPTGTM+G+ E+  LT +   + IRFISDEIYHGITY H+SVTAL  D +A++INSFSKYFSMTGWRLGWL++P  M RSVECLAQNLFISPPTLSQ+AALAAFDSH ELR+N+++YARNR+ILL ELP  GFDRLAPADGAFY+YADV  +TNDSA+FCRRML EA+VA T GLDFDPYRGN Y+RFSFAG+E+ M +A++RL  WR
Sbjct:  135 LGVAPVVVETRTEDRFQPTPRILAADAGELQGLIVASPSNPTGTMVGEKEMQALTSFAARHSIRFISDEIYHGITYSHDSVTALAFDEEAIVINSFSKYFSMTGWRLGWLVVPESMMRSVECLAQNLFISPPTLSQYAALAAFDSHHELRENVAKYARNRKILLSELPNVGFDRLAPADGAFYVYADVTQLTNDSADFCRRMLAEARVATTSGLDFDPYRGNGYVRFSFAGTEEHMRQAIDRLGAWR 381          
BLAST of mRNA_L-digitata_M_contig98306.1.1 vs. uniprot
Match: A0A2E7I0X5_9PROT (Aminotransferase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I0X5_9PROT)

HSP 1 Score: 379 bits (973), Expect = 4.720e-129
Identity = 178/247 (72.06%), Postives = 208/247 (84.21%), Query Frame = 1
Query:    1 LGGDPVVIETRLEDRFQPTPELLAQVEGGLDGLIVASPSNPTGTMLGDTEIAELTQYCRENGIRFISDEIYHGITYGHESVTALTHDPDAVIINSFSKYFSMTGWRLGWLIIPPEMTRSVECLAQNLFISPPTLSQHAALAAFDSHDELRDNISRYARNREILLRELPKAGFDRLAPADGAFYIYADVGHMTNDSAEFCRRMLTEAQVAATPGLDFDPYRGNTYIRFSFAGSEDDMTRAVERLRGWR 741
            LG +PVV+E R++DR Q TPE++A   G L GLIVASPSNPTGTM+  TE+A L  + R + IRFISDEIYHGITYG ++VTAL +D +A++INSFSKYFSMTGWRLGWL++P  M RSVECLAQNLFISPPTLSQHAA+AAFDSHDEL+ NI+ YARNREILL ELP  GFDRLAPADGAFYIYADV   TNDS +FCRRML+EA+VA TPG+DFDPYRG  Y+RFSFAG E+D+ +A+ERL  WR
Sbjct:  135 LGVEPVVVEARVQDRLQLTPEVIADEPGRLAGLIVASPSNPTGTMVDGTEMATLMNFSRRHSIRFISDEIYHGITYGDDAVTALAYDDEAIVINSFSKYFSMTGWRLGWLVVPEAMIRSVECLAQNLFISPPTLSQHAAIAAFDSHDELQLNIANYARNREILLAELPNVGFDRLAPADGAFYIYADVAEKTNDSTDFCRRMLSEARVATTPGVDFDPYRGKAYVRFSFAGGEEDIHKAIERLGAWR 381          
BLAST of mRNA_L-digitata_M_contig98306.1.1 vs. uniprot
Match: A0A848W558_9PROT (Aminotransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W558_9PROT)

HSP 1 Score: 362 bits (930), Expect = 1.540e-122
Identity = 171/248 (68.95%), Postives = 202/248 (81.45%), Query Frame = 1
Query:    1 LGGDPVVIETRLEDRFQPTPELLAQVEGGLDGLIVASPSNPTGTMLGDTEIAELTQYCRENGIRFISDEIYHGITYGHESVTALTHDPDAVIINSFSKYFSMTGWRLGWLIIPPEMTRSVECLAQNLFISPPTLSQHAALAAFDSHDELRDNISRYARNREILLRELPKAGFDRLAPADGAFYIYADVGHMTNDSAEFCRRMLTEAQVAATPGLDFDPYRGNTYIRFSFAGSEDDMTRAVERLRGWRK 744
            LG +PV++ET   DRFQPTP+LL Q  G LDGLI+ASPSNPTGTM+G  ++A L  +CR  G+RFISDEIYHGIT+G  +VTA   D DA++INSFSKYFSMTGWRLGW+I+P  + R VECL QNLFISPPTLSQHA +AAFDS  E+  N++RYARNR ILL +LP+ GFDRLAPADGAFYIYADV HMTNDS EFCRRML EA VAATPG+DFDP+ G+ ++RFSFAG+E+DM  A  RL  WR+
Sbjct:  135 LGVEPVLLETNAADRFQPTPKLL-QAAGDLDGLILASPSNPTGTMVGREDLAGLVAWCRAAGVRFISDEIYHGITFGSPAVTAAGLDADAIVINSFSKYFSMTGWRLGWMIVPDALLRPVECLTQNLFISPPTLSQHAGIAAFDSEAEVTANVARYARNRAILLDQLPRVGFDRLAPADGAFYIYADVAHMTNDSPEFCRRMLAEAHVAATPGVDFDPFSGHKFVRFSFAGTEEDMQAACARLAAWRR 381          
BLAST of mRNA_L-digitata_M_contig98306.1.1 vs. uniprot
Match: UPI0018676757 (aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme n=1 Tax=Nisaea nitritireducens TaxID=568392 RepID=UPI0018676757)

HSP 1 Score: 354 bits (908), Expect = 2.110e-119
Identity = 166/248 (66.94%), Postives = 200/248 (80.65%), Query Frame = 1
Query:    1 LGGDPVVIETRLEDRFQPTPELLAQVEGGLDGLIVASPSNPTGTMLGDTEIAELTQYCRENGIRFISDEIYHGITYGHESVTALTHDPDAVIINSFSKYFSMTGWRLGWLIIPPEMTRSVECLAQNLFISPPTLSQHAALAAFDSHDELRDNISRYARNREILLRELPKAGFDRLAPADGAFYIYADVGHMTNDSAEFCRRMLTEAQVAATPGLDFDPYRGNTYIRFSFAGSEDDMTRAVERLRGWRK 744
            LG +PV++ET  E R+QPTPELL  VEG LDGLI+ASPSNPTGTMLG+ E+A LT+YCRE GIR +SDEIY+GI +G  SV+AL  D  A++INSFSKYF MTGWRLGW+++P ++  S+E LAQN FISPPTLSQ A +AAFD  +EL+ N++RYA+NRE+LL ELP AG D LAPADGAFYIYADV  +TNDSA+FC+RML E  VAATPG+DFDP RG+  +RFSFAGS  DM  A  RL+GW K
Sbjct:  119 LGVEPVLLETEREHRYQPTPELLDAVEGELDGLIIASPSNPTGTMLGEEEMAALTRYCREKGIRLVSDEIYNGIDFGIRSVSALESDDQAIVINSFSKYFCMTGWRLGWMVVPDDLALSMERLAQNFFISPPTLSQFAGMAAFDCEEELQANVARYAQNREVLLNELPAAGLDNLAPADGAFYIYADVSRLTNDSADFCKRMLNETGVAATPGMDFDPARGHRSLRFSFAGSTPDMVEAASRLKGWLK 366          
BLAST of mRNA_L-digitata_M_contig98306.1.1 vs. uniprot
Match: UPI000409DAC1 (pyridoxal phosphate-dependent aminotransferase n=2 Tax=Nisaea TaxID=390876 RepID=UPI000409DAC1)

HSP 1 Score: 352 bits (903), Expect = 2.050e-118
Identity = 164/248 (66.13%), Postives = 201/248 (81.05%), Query Frame = 1
Query:    1 LGGDPVVIETRLEDRFQPTPELLAQVEGGLDGLIVASPSNPTGTMLGDTEIAELTQYCRENGIRFISDEIYHGITYGHESVTALTHDPDAVIINSFSKYFSMTGWRLGWLIIPPEMTRSVECLAQNLFISPPTLSQHAALAAFDSHDELRDNISRYARNREILLRELPKAGFDRLAPADGAFYIYADVGHMTNDSAEFCRRMLTEAQVAATPGLDFDPYRGNTYIRFSFAGSEDDMTRAVERLRGWRK 744
            LG + V++ET  + R+QPTPELL  VEG +DGLIVASPSNPTGTMLG+ E+A LT YC+E GIR +SDEIYHGI +G   V+AL  D  A++INSFSKYFSMTGWRLGW+++P +++RS+ECLAQN FISPPTLSQHAA+AAFD H+EL+ N++RYA+NRE+LL ELP AG D LAPADGAFYIYADV   TNDS +F +RML E  +AATPG+DFDP RG+  +RFSFAG+ +DM  A  RL+ W K
Sbjct:  135 LGVETVLLETERKHRYQPTPELLDAVEGKIDGLIVASPSNPTGTMLGEEELAALTGYCKEKGIRVVSDEIYHGIGFGTRPVSALESDDQALVINSFSKYFSMTGWRLGWMVVPEDLSRSMECLAQNFFISPPTLSQHAAVAAFDCHEELQANVARYAKNREVLLNELPAAGLDDLAPADGAFYIYADVTRFTNDSVDFSKRMLAEIGLAATPGVDFDPARGHGSLRFSFAGATEDMVEAASRLKNWLK 382          
BLAST of mRNA_L-digitata_M_contig98306.1.1 vs. uniprot
Match: A0A3N1MEX8_9PROT (Aminotransferase n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1MEX8_9PROT)

HSP 1 Score: 349 bits (896), Expect = 2.220e-117
Identity = 166/248 (66.94%), Postives = 198/248 (79.84%), Query Frame = 1
Query:    1 LGGDPVVIETRLEDRFQPTPELLAQVEGGLDGLIVASPSNPTGTMLGDTEIAELTQYCRENGIRFISDEIYHGITYGHESVTALTHDPDAVIINSFSKYFSMTGWRLGWLIIPPEMTRSVECLAQNLFISPPTLSQHAALAAFDSHDELRDNISRYARNREILLRELPKAGFDRLAPADGAFYIYADVGHMTNDSAEFCRRMLTEAQVAATPGLDFDPYRGNTYIRFSFAGSEDDMTRAVERLRGWRK 744
            LG + V++   LE  FQPTP+LL +  G LDG+IVASP+NPTGTML   ++A L  +CR  G+R +SDEIYHGIT+G + VTAL  D DAV+INSFSKYFSMTGWRLGW+I+P +M R+VECLAQNLFISPPTLSQHAA+AAFD   EL +N++RYARNR +LL ELPKAGFDRLAPADGAFYIYADV H+TNDS  FCRRML E  +AATPG+DFDP RGN  +RFSFAG+ + M  A  RL  W++
Sbjct:  135 LGIEAVLVPADLEHGFQPTPDLLERA-GPLDGVIVASPANPTGTMLAAADLAALAGWCRAKGVRLVSDEIYHGITFGVDGVTALAFDQDAVVINSFSKYFSMTGWRLGWMIVPADMVRAVECLAQNLFISPPTLSQHAAIAAFDCVPELEENVARYARNRALLLDELPKAGFDRLAPADGAFYIYADVAHLTNDSTLFCRRMLEEVGIAATPGVDFDPERGNRTLRFSFAGATETMAEAARRLVAWKR 381          
BLAST of mRNA_L-digitata_M_contig98306.1.1 vs. uniprot
Match: A0A1G3IMS1_9PROT (Aminotransferase n=1 Tax=Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_67_15 TaxID=1802023 RepID=A0A1G3IMS1_9PROT)

HSP 1 Score: 344 bits (883), Expect = 2.150e-115
Identity = 161/248 (64.92%), Postives = 192/248 (77.42%), Query Frame = 1
Query:    1 LGGDPVVIETRLEDRFQPTPELLAQVEGGLDGLIVASPSNPTGTMLGDTEIAELTQYCRENGIRFISDEIYHGITYGHESVTALTHDPDAVIINSFSKYFSMTGWRLGWLIIPPEMTRSVECLAQNLFISPPTLSQHAALAAFDSHDELRDNISRYARNREILLRELPKAGFDRLAPADGAFYIYADVGHMTNDSAEFCRRMLTEAQVAATPGLDFDPYRGNTYIRFSFAGSEDDMTRAVERLRGWRK 744
            LG +PV++E   E  FQP+PE+L + +  LDGLIVASP+NPTG M+G   +  L QYCR  GIR ISDEIYHGI YG  + TA   DP+A+++NSFSKYFSMTGWRLGW+++P  + R+VECL QNL+ISPPTLSQ AALA FD   EL  N++RYA NR +LL ELPKAGFD+LAPADGAFY+YADVG MTNDSAEFCRRML E  VAATPG DFDP RG+ ++RFSFAG+  DM  A  RL  WR+
Sbjct:  135 LGIEPVLLEVGPETHFQPSPEVLDRAQVRLDGLIVASPANPTGAMIGREGLGRLAQYCRARGIRLISDEIYHGIAYGAAAETAFAFDPEAIVVNSFSKYFSMTGWRLGWMVVPESLLRAVECLTQNLYISPPTLSQLAALAVFDCRGELDANVARYAENRRLLLAELPKAGFDKLAPADGAFYLYADVGAMTNDSAEFCRRMLAETGVAATPGADFDPVRGHRFVRFSFAGATADMAEAARRLIAWRR 382          
BLAST of mRNA_L-digitata_M_contig98306.1.1 vs. uniprot
Match: A0A2E6GKY0_9PROT (Aminotransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GKY0_9PROT)

HSP 1 Score: 344 bits (882), Expect = 3.360e-115
Identity = 159/250 (63.60%), Postives = 203/250 (81.20%), Query Frame = 1
Query:    1 LGGDPVVIETRLEDRFQPTPELLAQVEGGLDGLIVASPSNPTGTMLGDTEIAELTQYCRENGIRFISDEIYHGITYGHESVTALTHDPDAVIINSFSKYFSMTGWRLGWLIIPPEMTRSVECLAQNLFISPPTLSQHAALAAFDSHDELRDNISRYARNREILLRELPKAGFDRLAPADGAFYIYADVGHMTNDSAEFCRRMLTEAQVAATPGLDFDPYRGNTYIRFSFAGSEDDMTRAVERLRGWRKLT 750
            LG +PV++ T  E RFQPTPELL +++G LDGLIVASPSNPTGTMLG++E+  L++YCR+ G+R ISDEIYHGITY +  V+AL  D +A++INSFSKYFSMTGWR+GW+++P  ++RS+ECLAQNLFIS PTLSQ+ A AAFD  +EL  N+ RYA+NREILL+ LP AGFD+LAP DGAFYIYAD+ ++TNDS  FCRR+L +  VA TPG DFD  RG+++IRFSF+G+ + +T AVERL+ W   T
Sbjct:  135 LGIEPVLVPTGPETRFQPTPELLDKIDGPLDGLIVASPSNPTGTMLGESELGALSEYCRDRGVRLISDEIYHGITYENPGVSALRFDDEAIVINSFSKYFSMTGWRVGWMVVPTALSRSIECLAQNLFISAPTLSQYGAGAAFDCTEELDANVERYAQNREILLKGLPTAGFDQLAPVDGAFYIYADISNLTNDSESFCRRVLDDTGVATTPGTDFDQGRGSSFIRFSFSGATNQITEAVERLQHWMTKT 384          
BLAST of mRNA_L-digitata_M_contig98306.1.1 vs. uniprot
Match: A0A848Z7N4_9PROT (Aminotransferase n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848Z7N4_9PROT)

HSP 1 Score: 343 bits (881), Expect = 4.310e-115
Identity = 165/246 (67.07%), Postives = 192/246 (78.05%), Query Frame = 1
Query:    1 LGGDPVVIETRLEDRFQPTPELLAQVEGGLDGLIVASPSNPTGTMLGDTEIAELTQYCRENGIRFISDEIYHGITYGHESVTALTHDPDAVIINSFSKYFSMTGWRLGWLIIPPEMTRSVECLAQNLFISPPTLSQHAALAAFDSHDELRDNISRYARNREILLRELPKAGFDRLAPADGAFYIYADVGHMTNDSAEFCRRMLTEAQVAATPGLDFDPYRGNTYIRFSFAGSEDDMTRAVERLRGW 738
            LG +PV + T  E RFQPTP LL  ++  +DGLIVASPSNPTGTML   E A L  YC  NGIR ISDEIYHGITYG  + TA      AV+INSFSKY+SMTGWRLGW+++P +++R++ECLAQNLFISPPTLSQHAA+AAFD  +EL  N++RYA NR +LL  LPKAGFD+LAPADGAFY+YADV H+TNDS  FCRRML E  VAATPG+DFDP RG+  IRFSFAG+  DM  A ERLR W
Sbjct:  135 LGIEPVELPTEPEHRFQPTPALLDALDRPVDGLIVASPSNPTGTMLPPEEFAALAAYCDGNGIRLISDEIYHGITYGMAAATAAAVSDHAVVINSFSKYYSMTGWRLGWMVVPDDLSRAIECLAQNLFISPPTLSQHAAVAAFDCAEELDANVARYAANRSLLLEALPKAGFDKLAPADGAFYLYADVRHLTNDSEAFCRRMLAETGVAATPGVDFDPSRGHATIRFSFAGATADMAAAAERLRAW 380          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98306.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8XNQ7_9PROT1.930e-13875.71Aminotransferase n=1 Tax=Alphaproteobacteria bacte... [more]
A0A2E7PHR9_9PROT5.000e-13172.87Aminotransferase n=1 Tax=Rhodospirillaceae bacteri... [more]
A0A2E7I0X5_9PROT4.720e-12972.06Aminotransferase n=2 Tax=Alphaproteobacteria TaxID... [more]
A0A848W558_9PROT1.540e-12268.95Aminotransferase n=1 Tax=Alphaproteobacteria bacte... [more]
UPI00186767572.110e-11966.94aminotransferase class I/II-fold pyridoxal phospha... [more]
UPI000409DAC12.050e-11866.13pyridoxal phosphate-dependent aminotransferase n=2... [more]
A0A3N1MEX8_9PROT2.220e-11766.94Aminotransferase n=1 Tax=Stella humosa TaxID=94 Re... [more]
A0A1G3IMS1_9PROT2.150e-11564.92Aminotransferase n=1 Tax=Rhodospirillales bacteriu... [more]
A0A2E6GKY0_9PROT3.360e-11563.60Aminotransferase n=1 Tax=Rhodospirillaceae bacteri... [more]
A0A848Z7N4_9PROT4.310e-11567.07Aminotransferase n=1 Tax=Inquilinus sp. TaxID=1932... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98306contigL-digitata_M_contig98306:3..758 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1122135.KB893146_gene1734
Preferred nameaspB
PFAMsAminotran_1_2
Model size756
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.09e-113
EggNOG OGsCOG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,2TS06@28211|Alphaproteobacteria
DescriptionAminotransferase
Cds size756
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682408640.4110208-CDS-L-digitata_M_contig98306:2..7581682408640.4110208-CDS-L-digitata_M_contig98306:2..758Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig98306 3..758 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98306.1.1prot_L-digitata_M_contig98306.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig98306 3..758 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig98306.1.1

>prot_L-digitata_M_contig98306.1.1 ID=prot_L-digitata_M_contig98306.1.1|Name=mRNA_L-digitata_M_contig98306.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=252bp
LGGDPVVIETRLEDRFQPTPELLAQVEGGLDGLIVASPSNPTGTMLGDTE
IAELTQYCRENGIRFISDEIYHGITYGHESVTALTHDPDAVIINSFSKYF
SMTGWRLGWLIIPPEMTRSVECLAQNLFISPPTLSQHAALAAFDSHDELR
DNISRYARNREILLRELPKAGFDRLAPADGAFYIYADVGHMTNDSAEFCR
RMLTEAQVAATPGLDFDPYRGNTYIRFSFAGSEDDMTRAVERLRGWRKLT
A*
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mRNA from alignment at L-digitata_M_contig98306:3..758+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig98306.1.1 ID=mRNA_L-digitata_M_contig98306.1.1|Name=mRNA_L-digitata_M_contig98306.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=756bp|location=Sequence derived from alignment at L-digitata_M_contig98306:3..758+ (Laminaria digitata LdigPH10_18mv male)
CTGGGGGGTGACCCGGTGGTTATTGAAACCCGTCTTGAAGACCGCTTTCA GCCAACACCTGAACTTCTGGCCCAGGTGGAAGGTGGTCTCGATGGACTTA TCGTGGCCAGCCCTTCAAATCCAACTGGAACGATGCTCGGTGATACGGAG ATAGCCGAGCTTACCCAGTATTGCCGTGAGAACGGGATCCGTTTTATTTC TGATGAGATTTATCACGGCATTACTTATGGACATGAATCAGTCACCGCCC TGACTCATGATCCGGATGCCGTGATCATCAACAGTTTCTCGAAGTATTTT TCGATGACGGGCTGGCGGCTGGGGTGGTTGATAATTCCGCCGGAGATGAC GCGGTCCGTAGAATGCCTCGCGCAGAACCTGTTCATATCTCCACCCACGC TTTCGCAACATGCAGCTCTGGCTGCGTTCGACAGTCATGATGAATTACGT GACAATATTTCGCGATATGCCCGCAACCGGGAGATTTTGCTCAGGGAGCT TCCCAAGGCGGGCTTCGATCGTCTCGCCCCGGCGGACGGCGCTTTCTATA TCTATGCCGATGTCGGTCATATGACGAATGACAGCGCAGAGTTTTGTCGT CGAATGCTGACGGAGGCGCAGGTGGCCGCGACACCGGGGCTGGATTTCGA CCCGTATCGCGGCAACACCTATATCCGCTTCTCCTTCGCGGGTAGCGAAG ATGATATGACGCGTGCTGTCGAGCGCCTGCGCGGTTGGCGCAAACTTACC GCTTGA
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Coding sequence (CDS) from alignment at L-digitata_M_contig98306:3..758+

>mRNA_L-digitata_M_contig98306.1.1 ID=mRNA_L-digitata_M_contig98306.1.1|Name=mRNA_L-digitata_M_contig98306.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=756bp|location=Sequence derived from alignment at L-digitata_M_contig98306:3..758+ (Laminaria digitata LdigPH10_18mv male)
CTGGGGGGTGACCCGGTGGTTATTGAAACCCGTCTTGAAGACCGCTTTCA
GCCAACACCTGAACTTCTGGCCCAGGTGGAAGGTGGTCTCGATGGACTTA
TCGTGGCCAGCCCTTCAAATCCAACTGGAACGATGCTCGGTGATACGGAG
ATAGCCGAGCTTACCCAGTATTGCCGTGAGAACGGGATCCGTTTTATTTC
TGATGAGATTTATCACGGCATTACTTATGGACATGAATCAGTCACCGCCC
TGACTCATGATCCGGATGCCGTGATCATCAACAGTTTCTCGAAGTATTTT
TCGATGACGGGCTGGCGGCTGGGGTGGTTGATAATTCCGCCGGAGATGAC
GCGGTCCGTAGAATGCCTCGCGCAGAACCTGTTCATATCTCCACCCACGC
TTTCGCAACATGCAGCTCTGGCTGCGTTCGACAGTCATGATGAATTACGT
GACAATATTTCGCGATATGCCCGCAACCGGGAGATTTTGCTCAGGGAGCT
TCCCAAGGCGGGCTTCGATCGTCTCGCCCCGGCGGACGGCGCTTTCTATA
TCTATGCCGATGTCGGTCATATGACGAATGACAGCGCAGAGTTTTGTCGT
CGAATGCTGACGGAGGCGCAGGTGGCCGCGACACCGGGGCTGGATTTCGA
CCCGTATCGCGGCAACACCTATATCCGCTTCTCCTTCGCGGGTAGCGAAG
ATGATATGACGCGTGCTGTCGAGCGCCTGCGCGGTTGGCGCAAACTTACC
GCTTGA
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