prot_L-digitata_M_contig9810.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9810.1.1
Unique Nameprot_L-digitata_M_contig9810.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length88
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9810.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001820Protease inhibitor I35 (TIMP)PFAMPF00965TIMPcoord: 3..77
e-value: 3.8E-8
score: 33.4
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldGENE3D2.40.50.120coord: 1..87
e-value: 9.3E-14
score: 53.3
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 4..81
IPR001134Netrin domainPROSITEPS50189NTRcoord: 1..85
score: 8.607461

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9810contigL-digitata_M_contig9810:1938..2201 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9810.1.1mRNA_L-digitata_M_contig9810.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9810 1938..2201 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9810.1.1 ID=prot_L-digitata_M_contig9810.1.1|Name=mRNA_L-digitata_M_contig9810.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=88bp
YGEITYTLDAEKIYKSSAKHHGNNEISFNTNASSAACRVYLALGKQYLLG
LYQSDDGSFTASSCGLVRHWNNLMEEETAFLKLECEDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001820TIMP
IPR008993TIMP-like_OB-fold
IPR001134Netrin_domain