prot_L-digitata_M_contig97868.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig97868.1.1
Unique Nameprot_L-digitata_M_contig97868.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length168
Homology
BLAST of mRNA_L-digitata_M_contig97868.1.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 2.450e-46
Identity = 89/174 (51.15%), Postives = 112/174 (64.37%), Query Frame = 0
Query:    3 TCHQQWPSTKRPPPAQAYECD--------TCHRDKANYLQTPSMPQVAKFGAGNGMVPDPVPPELTGLTMVEQQMIARAHPICKVIRQPGGHYAYEGHVINISQDITTIATDLPWLPNLDELPIIIIQPPNGGDWKGREFKVNPTRVETALVWLIAYSPAYRD-VRIDIGRLAE 167
            TCH+QWP T R  P +  E +         C  D     + PS+PQVAKFG  N  VP PVP  +  LTM E+ +IARA P+ KV+R  GG + YEGHV+++ QDI   AT LPWLP  +E+P++I+QPP GG W GR FKVN  RVE AL++LI +SPAYR  V ID+ RL E
Sbjct:   63 TCHEQWP-TDRTLPEETPERNGVPEIQSMRCSNDLVERRRQPSLPQVAKFGEVNRTVPPPVPGYMQNLTMTEEMLIARASPVVKVVRLAGGMHGYEGHVLSMGQDIGEFATRLPWLPTSEEIPVVIVQPPEGGSWAGRNFKVNLARVEGALLYLIRHSPAYRGIVHIDMARLRE 235          
BLAST of mRNA_L-digitata_M_contig97868.1.1 vs. uniprot
Match: A0A6H5K2R2_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R2_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 3.230e-42
Identity = 72/126 (57.14%), Postives = 92/126 (73.02%), Query Frame = 0
Query:   43 KFGAGNGMVPDPVPPELTGLTMVEQQMIARAHPICKVIRQPGGHYAYEGHVINISQDITTIATDLPWLPNLDELPIIIIQPPNGGDWKGREFKVNPTRVETALVWLIAYSPAYRDVRIDIGRLAEL 168
            KFG+GN M+PD + P+L GLT++EQQ+I+ AHPI +  R PGG  AY GH++N+++D+TT AT LPW  N D++PII+I PP GG W+GREFK     VE AL WLIA +PAY  VRIDI  L  L
Sbjct:   25 KFGSGNSMIPDDLVPQLMGLTVLEQQLISMAHPIARAYRLPGGQCAYSGHILNVARDVTTFATSLPWQANSDDIPIIVIVPPGGGTWQGREFKALKNCVEIALNWLIANNPAYSSVRIDIENLDRL 150          
BLAST of mRNA_L-digitata_M_contig97868.1.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 1.080e-40
Identity = 75/130 (57.69%), Postives = 95/130 (73.08%), Query Frame = 0
Query:   38 MPQVAKFGAGNGMVPDPVPPELTGLTMVEQQMIARAHPICKVIRQPGGHYAYEGHVINISQDITTIATDLPWLPNLDELPIIIIQPPNGGDWKGREFKVNPTRVETALVWLIAYSPAYRDVR--IDIGRL 165
            MPQVAKF   NG VP+PVP EL  LTM E+ MI+ A P+CKVIR  GG + Y+GHV++I QDI      LPWLPN DE+P+IIIQPP+GG W GR+FKV+  RV+ AL +L+ +SP Y D+R  ID+ R+
Sbjct:    1 MPQVAKFSVENGTVPNPVPDELRSLTMSEEMMISMAFPVCKVIRLAGGAHGYKGHVLSIGQDIGGFVGTLPWLPNSDEMPVIIIQPPDGGSWAGRQFKVSLERVQRALNYLMLHSPPYMDIRSRIDMDRV 130          
BLAST of mRNA_L-digitata_M_contig97868.1.1 vs. uniprot
Match: UPI00109BE5C8 (uncharacterized protein LOC110237019 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BE5C8)

HSP 1 Score: 114 bits (285), Expect = 2.680e-26
Identity = 65/165 (39.39%), Postives = 87/165 (52.73%), Query Frame = 0
Query:    4 CHQQWPSTKRPPPAQAYECDTCHRDKANYLQTPSMPQVAKFGAGNGMVPDPVPPELTGLTMVEQQMIARAHPICKVIRQPGGHYAYEGHVINISQDITTIATDLPWLPNLDELPIIIIQPPNGGDWKGREFKVNPTRVETALVWLIAYSPAYRDVRIDIGRLAEL 168
            CH+ WP   +P     Y C  C RDK +           KF   N M+P PVPP+L GL+ VE+ +IARA PI +V  +PGG   Y GH IN+ Q+I  +A  LP  P   +L +II++     D   ++  V   +V  AL WLI  +P Y DV+ID   L  L
Sbjct:  597 CHEAWPLKSKPRKPDVYVCSRCLRDKKS---------PKKFSVENEMIPSPVPPQLQGLSQVEEMLIARALPIMRVYIKPGGQRGYSGHCINLPQNIKELALSLPRYPK--DLSVIIVKVKGRND-SYKDVNVRRQKVTDALTWLIQNNPHYSDVQIDCIALNTL 749          
BLAST of mRNA_L-digitata_M_contig97868.1.1 vs. uniprot
Match: A0A6H5J8Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y8_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 8.420e-25
Identity = 64/160 (40.00%), Postives = 91/160 (56.88%), Query Frame = 0
Query:    9 PSTKRPPPAQAYECDTCHRDKANYLQTPSMPQVAKFGAGNGMVPDPVPPELTGLTMVEQQMIARAHPICKVIRQPGGHYAYEGHVINISQDITTIATDLPWLPNLDELPIIIIQPPNGGDWKGREFKVNPTRVETALVWLIAYSPAYRDVRIDIGRLAEL 168
            P    P PA +Y C  C +DK    ++P +     F A N M P  VP EL GLT  E+ +IAR  PI +V+   GG   Y GHV+N++QDI+T+A  LP L    ++PIIII+       + ++  V   RV+ AL WLIA +P YRD+ +D   +++L
Sbjct:   13 PPPAAPTPAGSYSCPRCKKDK----KSPKL-----FSADNTMDPGSVPVELQGLTQTEEMLIARCCPIMRVLHLKGGQLGYGGHVVNVAQDISTLAAALPRLAA--DVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTAISQL 161          
BLAST of mRNA_L-digitata_M_contig97868.1.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 6.970e-24
Identity = 65/173 (37.57%), Postives = 94/173 (54.34%), Query Frame = 0
Query:    2 TTCHQQWPSTKRPPP------AQAYECDTCHRDKANYLQTPSMPQVAKFGAGNGMVPDPVPPELTGLTMVEQQMIARAHPICKVIRQPGGHYAYEGHVINISQDITTIATDLPWLPNLDELPIIIIQPPNGGDWKGREFKVNPTRVETALVWLIAYSPAYRDVRIDIGRLAEL 168
            T C ++W + +  P          Y C  C +DK    ++P +     F A N M P  VP EL GLT  E+ +IAR  PI +V+   GG   Y GHV+N++QDI+T+A  LP L    ++PIIII+       + ++  V   RV+ AL WLIA +P YRD+ +D   L++L
Sbjct:  107 TVCSERWDTAEDGPGXXXXXGGAVYSCPRCKKDK----KSPKL-----FSADNTMDPGSVPVELQGLTQTEEMLIARCCPIMRVLHLKGGQLGYGGHVVNVAQDISTLAAALPRLAA--DVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQL 268          
BLAST of mRNA_L-digitata_M_contig97868.1.1 vs. uniprot
Match: A0A6J1T7K2_FRAOC (uncharacterized protein LOC113214430 n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1T7K2_FRAOC)

HSP 1 Score: 100 bits (248), Expect = 2.470e-21
Identity = 63/154 (40.91%), Postives = 82/154 (53.25%), Query Frame = 0
Query:   21 ECDTCHRDKANYLQTPSMPQVA------KFGAGNGMVPDPVPPELTGLTMVEQQMIARAHPICKVIRQPGGHYAYEGHVINISQDITTIATDLPWLPNLDELPIIIIQPPNGGDWKGREFKVNPTRVETALVWLIAYSPAYRDVRIDIGRLAEL 168
            ECD CHR     +     P  A      KF A N M P  VPPEL GLT +EQQ+IAR HP+  V +  GG Y Y G++IN  QD+  +A+ LP    L +L  +I     G + +  +FKV    V  ALVWL A +  YRD++I    L +L
Sbjct:  262 ECDKCHRSVMR-VDGKLAPTCANNECHKKFSATNFMDPGEVPPELQGLTYIEQQLIARVHPVVSVYKVRGGQYGYSGNIINFPQDVQQLASALPH--RLADLSSVITVRTQGAEGQV-DFKVRAGYVRRALVWLKANNRNYRDIQISEENLNDL 411          
BLAST of mRNA_L-digitata_M_contig97868.1.1 vs. uniprot
Match: A0A6H5JBH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH9_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 8.820e-21
Identity = 52/119 (43.70%), Postives = 73/119 (61.34%), Query Frame = 0
Query:   50 MVPDPVPPELTGLTMVEQQMIARAHPICKVIRQPGGHYAYEGHVINISQDITTIATDLPWLPNLDELPIIIIQPPNGGDWKGREFKVNPTRVETALVWLIAYSPAYRDVRIDIGRLAEL 168
            M P  VP EL GLT  E+ +IAR  PI +V+   GG   Y GHV+N++QDI+T+A  LP L    ++PIIII+       + ++  V   RV+ AL WLIA +P YRD+ +D   L++L
Sbjct:    1 MDPGSVPVELQGLTQTEEMLIARCCPIMRVLHLKGGQLGYGGHVVNVAQDISTLAAALPRLAA--DVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQL 117          
BLAST of mRNA_L-digitata_M_contig97868.1.1 vs. uniprot
Match: A0A6S7ILW5_PARCT (Helitron_like_N domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7ILW5_PARCT)

HSP 1 Score: 96.3 bits (238), Expect = 4.080e-20
Identity = 48/121 (39.67%), Postives = 68/121 (56.20%), Query Frame = 0
Query:    2 TTCHQQWPSTKRPPPAQAYECDTCHRDKANYLQTPSMPQVAKFGAGNGMVPDPVPPELTGLTMVEQQMIARAHPICKVIRQPGGHYAYEGHVINISQDITTIATDLPWLPNLDELPIIIIQ 122
            T CH+ WP    P     Y C  C RDK        +P+  KF   N M+P P+PP+L GLT VE+ ++ARA PI +V  +PGG   Y GH +N+ Q +  +A+ LP  P   +L +II++
Sbjct:  118 TVCHEAWPLKSEPRSQDTYICSRCDRDK-------KIPK--KFSKENSMIPSPIPPQLQGLTQVEEMLVARALPIMRVYIKPGGQRGYSGHCVNLPQHVDELASSLPRYPK--DLSVIIVK 227          
BLAST of mRNA_L-digitata_M_contig97868.1.1 vs. uniprot
Match: UPI001CF4373B (uncharacterized protein LOC122964260 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF4373B)

HSP 1 Score: 88.2 bits (217), Expect = 7.320e-18
Identity = 47/119 (39.50%), Postives = 70/119 (58.82%), Query Frame = 0
Query:   50 MVPDPVPPELTGLTMVEQQMIARAHPICKVIRQPGGHYAYEGHVINISQDITTIATDLPWLPNLDELPIIIIQPPNGGDWKGREFKVNPTRVETALVWLIAYSPAYRDVRIDIGRLAEL 168
            M+P  VPP+L GLT VE+ ++ARA PI  V  +PGG + Y GH IN+SQ++  +A  LP  P   +L +I+++   G D   ++  V    V  AL WLI  +P Y+D+ ++   L  L
Sbjct:    1 MIPSSVPPQLEGLTQVEEMLVARALPIMSVYIKPGGQWGYSGHCINLSQNVAELAHSLPRYPK--DLSVIVVKM-KGKDNNFKDVTVRRQNVADALQWLINNNPHYKDIIVNQDSLNSL 116          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig97868.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K692_9PHAE2.450e-4651.15ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K2R2_9PHAE3.230e-4257.14Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5KFJ0_9PHAE1.080e-4057.69ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
UPI00109BE5C82.680e-2639.39uncharacterized protein LOC110237019 n=1 Tax=Exaip... [more]
A0A6H5J8Y8_9PHAE8.420e-2540.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L976_9PHAE6.970e-2437.57ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ... [more]
A0A6J1T7K2_FRAOC2.470e-2140.91uncharacterized protein LOC113214430 n=1 Tax=Frank... [more]
A0A6H5JBH9_9PHAE8.820e-2143.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6S7ILW5_PARCT4.080e-2039.67Helitron_like_N domain-containing protein n=1 Tax=... [more]
UPI001CF4373B7.320e-1839.50uncharacterized protein LOC122964260 n=1 Tax=Acrop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig97868contigL-digitata_M_contig97868:269..977 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig97868.1.1mRNA_L-digitata_M_contig97868.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig97868 269..977 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig97868.1.1 ID=prot_L-digitata_M_contig97868.1.1|Name=mRNA_L-digitata_M_contig97868.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=168bp
WTTCHQQWPSTKRPPPAQAYECDTCHRDKANYLQTPSMPQVAKFGAGNGM
VPDPVPPELTGLTMVEQQMIARAHPICKVIRQPGGHYAYEGHVINISQDI
TTIATDLPWLPNLDELPIIIIQPPNGGDWKGREFKVNPTRVETALVWLIA
YSPAYRDVRIDIGRLAEL
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