prot_L-digitata_M_contig10153.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-digitata_M_contig10153.1.1
Unique Name	prot_L-digitata_M_contig10153.1.1
Type	polypeptide
Organism	Laminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length	179

Homology

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BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: D7G1Q4_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Q4_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 8.990e-88
Identity = 131/173 (75.72%), Postives = 146/173 (84.39%), Query Frame = 0

Query:    3 FLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVAKSMVNTAVCPSGAAIVVMLIHWYHHR 175
            ++ QWAFAATSTTIVSGAIAERVALHAY IY ++IT++IYP+VAHW WA +GWAS  R +  LL GCGVADFSGSGVVH+TGGLMALVAA    PRGGRFDA G+  RLE+QSPALNVLG LILWAGWFFFNASGV SFS QPD  AKSM+NTAVCPS A +V MLIHW +HR
Sbjct:   78 WMLQWAFAATSTTIVSGAIAERVALHAYLIYGVIITSLIYPVVAHWVWARSGWASSFRADGDLLVGCGVADFSGSGVVHLTGGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHR 250

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BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: A0A6H5JVJ2_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ2_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 5.150e-49
Identity = 95/168 (56.55%), Postives = 118/168 (70.24%), Query Frame = 0

Query:    6 QWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEI---LLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVA-KSMVNTAVCPSGAAIVVMLI 169
             WAFAATS TIVSGAIAERV + +Y  YAI +T+ IYP+V HWAW   GWASP+R  +    LL+GCG ADF+GSGVVHM GG+ ALVAA+  +PR  RF   G +CRL QQSPAL  LG LILW GW+ FNA    + S     VA +++V+T + PS A ++VM+I
Sbjct:  131 DWAFAATSVTIVSGAIAERVKIVSYVTYAIALTSFIYPVVVHWAWHPDGWASPYRTADEGAPLLSGCGAADFAGSGVVHMVGGIAALVAAIAVKPRKSRF-RHGHACRLPQQSPALQTLGTLILWVGWYAFNAGSTITISGGRSVVAARAVVSTTIGPS-AGVLVMVI 296

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BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 2.060e-46
Identity = 90/175 (51.43%), Postives = 113/175 (64.57%), Query Frame = 0

Query:    3 FLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVAKSMVNTAVCPSGAAIVVMLI------HW 171
            +L QWAFAAT+ TIVSGA+AERV+ +AY IY++++T+ IYP+V HW WA  GWAS  R E  LL GCGV DF+GSGVVHMTGGL AL AA++  PR GRF+  G +  L QQS  L  LG LILW GW+ FN              AK+MV T +  +  A+  +L+      HW
Sbjct:  124 WLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWAG-GWASAWR-ETDLLFGCGVIDFAGSGVVHMTGGLAALCAAIVVGPRTGRFNEDGTANTLPQQSAVLQSLGTLILWFGWYGFNGVSTLYIVGFAGVAAKTMVTTTISAAFGAVTTVLLGKFNLGHW 296

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BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: D7G265_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G265_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 2.570e-44
Identity = 82/169 (48.52%), Postives = 109/169 (64.50%), Query Frame = 0

Query:    3 FLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPH-RPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVAKSMVNTAVCPSGAAIVVMLIH 170
            +L QW FAA++TTIVSGA+AER    AY +++ ++T+ IYP+VAHWAW++ GWAS     ++ LL GCGV DF+GSGVVHMTGG+ AL+   +  PR GRF+  G S  + QQS  L  LG  +LW GW  FNA  V SF   P   AK M  T +  +   I  +L++
Sbjct:  110 WLFQWTFAASATTIVSGAMAERATFGAYVLHSFLLTSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGVTDFAGSGVVHMTGGMAALMGIFILGPRAGRFNEDGTSNTMPQQSAVLQTLGTFMLWWGWLGFNAGSVSSFVATPAVAAKVMGVTVIGGASGGITSLLVN 278

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BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: A0A6H5L6H3_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6H3_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 2.420e-43
Identity = 90/182 (49.45%), Postives = 114/182 (62.64%), Query Frame = 0

Query:    6 QWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEI---------------LLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSE-QPDSVAKSMVNTAVCPSGAAIVVMLIHW 171
            +WAFAAT+ T+VSGA+AER+ + AY   +++IT +IYP+V HW W+E GWASP R E+                LL GCG  DF+G+GVVHMTGG+ ALVAA +  PR  RF   G   R+ QQSPAL  LG LILW GW+ FN   V S S  +   VA +MVNT +  S AA V+ +  W
Sbjct:  122 EWAFAATAATVVSGAVAERIKIAAYVQLSVLITFLIYPVVVHWVWSEGGWASPRRCEDTTTAVDYQLCREESRGLLLGCGATDFAGAGVVHMTGGMCALVAAKIVGPRTKRF-RNGIPNRMPQQSPALQTLGVLILWVGWYGFNGGSVGSVSNGRSHLVAAAMVNTTI--SAAASVLSVGLW 300

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BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: A0A7S4DGA7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGA7_HETAK)

HSP 1 Score: 153 bits (386), Expect = 1.170e-41
Identity = 86/180 (47.78%), Postives = 111/180 (61.67%), Query Frame = 0

Query:    1 WG-FLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVA--KSMVNTAV-----CPSGAAIVVMLIHWY 172
            WG +L QWAFAAT+ TIV+GA+ ERV   AY IY+I +T  IYP++ HW W+  GWAS  R +++LL GCG+ DF+GSGV+H TGG+ AL+ A +  PR GRF ATG+ C + Q S     LG L LW      N  GV S      S+A  ++MVNT +     C SG  IV   +H Y
Sbjct:   36 WGMWLFQWAFAATTATIVNGAVVERVCFGAYIIYSICLTGFIYPLIVHWGWSAGGWASAWREDKLLL-GCGIIDFAGSGVIHTTGGVAALLGAYMIGPRKGRFSATGEVCEIPQLSWVYQTLGTLFLWFXXXXXN--GVSSMYAAGGSLAGARAMVNTTISGGAGCISGL-IVARFVHGY 211

[Close]

BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: A0A6H5J7X8_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7X8_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 2.050e-41
Identity = 79/162 (48.77%), Postives = 104/162 (64.20%), Query Frame = 0

Query:    3 FLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPH-RPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVAKSMVNTAVCPSGAA 163
            ++ QWAFAA++TTIVSGA+AER    AY +++ +IT+ IYP+VAHWAW++ GWAS     ++ LL GCG  + +GSGVVHMTGG+ AL    +  PR GRF+  G S  + QQS  L  LG  ILW GW  FN   + SF   P   A+ M  T +  SGA+
Sbjct:  110 WIFQWAFAASATTIVSGAMAERATFGAYVLHSFLITSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGAIELAGSGVVHMTGGMAALTGIFILGPRAGRFNEDGSSNTMPQQSAVLQTLGTFILWWGWLGFNGGSLPSFVSMPAVAARVMAVTVI--SGAS 269

[Close]

BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 3.010e-41
Identity = 81/167 (48.50%), Postives = 107/167 (64.07%), Query Frame = 0

Query:    3 FLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVAKSMVNTAVCPSGAAIVVMLI 169
            +L QWAFAAT+ TIVSGA+AERV+ +AY IY++++T+ IYP+V HW W   GWAS    E++L   CGV DF+GSGVVHMTGGL AL AA++  PR GRF+  G +  L QQS  L  LG LILW G          + +      AK+MV T +  +  A+  +L+
Sbjct:  128 WLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWGG-GWASAWVDEDLLFD-CGVIDFAGSGVVHMTGGLAALAAAIVVGPRTGRFNEDGTANTLPQQSAVLQTLGTLILWFGXXXXXXVSTLAINGLAGVAAKTMVTTTISAAFGAVTTVLL 292

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BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: D7G3S7_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3S7_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 6.180e-41
Identity = 81/171 (47.37%), Postives = 103/171 (60.23%), Query Frame = 0

Query:    2 GFLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVAKSMVNTAVCPSGAAIVVMLIHWY 172
            G+L QWAFAAT+ TIVSGA+ ERV   AY +YA+ +   IYP+V HW W+  GWAS  R  E+L+  CGV DF+GSGVVHMTGG  ALV AVL  PR GRF   G    L Q S     LG L LW GW+ FN     +     +  A++MVNT +    A +  + + ++
Sbjct:  124 GWLFQWAFAATTATIVSGAVVERVTFGAYVVYAMCLLGFIYPVVVHWGWSAGGWASAWRETELLMD-CGVLDFAGSGVVHMTGGTAALVGAVLLGPRSGRF-IDGIPVELPQLSFVYQTLGTLCLWMGWYGFNGVSTLAIVGLGEVAARAMVNTTIAGGVACVTSVTVAYF 292

[Close]

BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: A0A6V1QTK2_HETAK (Ammonium transporter n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QTK2_HETAK)

HSP 1 Score: 151 bits (381), Expect = 2.330e-40
Identity = 78/172 (45.35%), Postives = 102/172 (59.30%), Query Frame = 0

Query:    2 GFLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVAKSMVNTAVCPSGAAIVVMLIHWYH 173
            G+L QWAFAAT+ TIV+G++AER+   AY +YA  + + +YP V HW W   GWAS  R EE LL GCGV DF+GSGVVH TGG++AL  A +  PR GRF   GQ    ++ SP    LG LILW GW+ FN +            A++MV + +      I  +L+   H
Sbjct:  126 GWLFQWAFAATTATIVTGSVAERITFSAYLVYAFCLVSFVYPCVVHWGWNANGWASAWR-EEDLLFGCGVLDFAGSGVVHTTGGVVALWGAKILGPRTGRF-INGQKQEFKEVSPIYQTLGTLILWFGWYGFNGASTLYIGGYSAPAARAMVTSTISAGAGCISSVLLAKLH 295

The following BLAST results are available for this feature:

BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot

BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G1Q4_ECTSI	8.990e-88	75.72	Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A6H5JVJ2_9PHAE	5.150e-49	56.55	Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1...	[more]
D7FR22_ECTSI	2.060e-46	51.43	Ammonium transporter n=1 Tax=Ectocarpus siliculosu...	[more]
D7G265_ECTSI	2.570e-44	48.52	Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A6H5L6H3_9PHAE	2.420e-43	49.45	Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1...	[more]
A0A7S4DGA7_HETAK	1.170e-41	47.78	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A6H5J7X8_9PHAE	2.050e-41	48.77	Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1...	[more]
D7G243_ECTSI	3.010e-41	48.50	Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879...	[more]
D7G3S7_ECTSI	6.180e-41	47.37	Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A6V1QTK2_HETAK	2.330e-40	45.35	Ammonium transporter n=1 Tax=Heterosigma akashiwo ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024041	Ammonium transporter AmtB-like domain	PFAM	PF00909	Ammonium_transp	coord: 3..176 e-value: 3.9E-44 score: 151.0
IPR029020	Ammonium/urea transporter	GENE3D	1.10.3430.10	Ammonium transporter AmtB like domains	coord: 1..178 e-value: 8.6E-50 score: 171.7
None	No IPR available	PANTHER	PTHR11730:SF6	AMMONIUM TRANSPORTER	coord: 3..174
None	No IPR available	PANTHER	PTHR11730	AMMONIUM TRANSPORTER	coord: 3..174
None	No IPR available	SUPERFAMILY	111352	Ammonium transporter	coord: 3..176

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-digitata_M_contig10153	contig	L-digitata_M_contig10153:1017..9240 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-digitata_M_contig10153.1.1	mRNA_L-digitata_M_contig10153.1.1	Laminaria digitata LdigPH10_18mv male	mRNA	L-digitata_M_contig10153 1017..9240 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-digitata_M_contig10153.1.1 ID=prot_L-digitata_M_contig10153.1.1|Name=mRNA_L-digitata_M_contig10153.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=179bp
WGFLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAW
AETGWASPHRPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGG
RFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVAK
SMVNTAVCPSGAAIVVMLIHWYHHRRSV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024041	NH4_transpt_AmtB-like_dom
IPR029020	Ammonium/urea_transptr