mRNA_L-digitata_M_contig10153.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: D7G1Q4_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Q4_ECTSI) HSP 1 Score: 273 bits (698), Expect = 8.990e-88 Identity = 131/173 (75.72%), Postives = 146/173 (84.39%), Query Frame = 1
Query: 7 FLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVAKSMVNTAVCPSGAAIVVMLIHWYHHR 525
++ QWAFAATSTTIVSGAIAERVALHAY IY ++IT++IYP+VAHW WA +GWAS R + LL GCGVADFSGSGVVH+TGGLMALVAA PRGGRFDA G+ RLE+QSPALNVLG LILWAGWFFFNASGV SFS QPD AKSM+NTAVCPS A +V MLIHW +HR
Sbjct: 78 WMLQWAFAATSTTIVSGAIAERVALHAYLIYGVIITSLIYPVVAHWVWARSGWASSFRADGDLLVGCGVADFSGSGVVHLTGGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHR 250
BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: A0A6H5JVJ2_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ2_9PHAE) HSP 1 Score: 177 bits (449), Expect = 5.150e-49 Identity = 95/168 (56.55%), Postives = 118/168 (70.24%), Query Frame = 1
Query: 16 QWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEI---LLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVA-KSMVNTAVCPSGAAIVVMLI 507
WAFAATS TIVSGAIAERV + +Y YAI +T+ IYP+V HWAW GWASP+R + LL+GCG ADF+GSGVVHM GG+ ALVAA+ +PR RF G +CRL QQSPAL LG LILW GW+ FNA + S VA +++V+T + PS A ++VM+I
Sbjct: 131 DWAFAATSVTIVSGAIAERVKIVSYVTYAIALTSFIYPVVVHWAWHPDGWASPYRTADEGAPLLSGCGAADFAGSGVVHMVGGIAALVAAIAVKPRKSRF-RHGHACRLPQQSPALQTLGTLILWVGWYAFNAGSTITISGGRSVVAARAVVSTTIGPS-AGVLVMVI 296
BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI) HSP 1 Score: 167 bits (422), Expect = 2.060e-46 Identity = 90/175 (51.43%), Postives = 113/175 (64.57%), Query Frame = 1
Query: 7 FLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVAKSMVNTAVCPSGAAIVVMLI------HW 513
+L QWAFAAT+ TIVSGA+AERV+ +AY IY++++T+ IYP+V HW WA GWAS R E LL GCGV DF+GSGVVHMTGGL AL AA++ PR GRF+ G + L QQS L LG LILW GW+ FN AK+MV T + + A+ +L+ HW
Sbjct: 124 WLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWAG-GWASAWR-ETDLLFGCGVIDFAGSGVVHMTGGLAALCAAIVVGPRTGRFNEDGTANTLPQQSAVLQSLGTLILWFGWYGFNGVSTLYIVGFAGVAAKTMVTTTISAAFGAVTTVLLGKFNLGHW 296
BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: D7G265_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G265_ECTSI) HSP 1 Score: 161 bits (408), Expect = 2.570e-44 Identity = 82/169 (48.52%), Postives = 109/169 (64.50%), Query Frame = 1
Query: 7 FLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPH-RPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVAKSMVNTAVCPSGAAIVVMLIH 510
+L QW FAA++TTIVSGA+AER AY +++ ++T+ IYP+VAHWAW++ GWAS ++ LL GCGV DF+GSGVVHMTGG+ AL+ + PR GRF+ G S + QQS L LG +LW GW FNA V SF P AK M T + + I +L++
Sbjct: 110 WLFQWTFAASATTIVSGAMAERATFGAYVLHSFLLTSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGVTDFAGSGVVHMTGGMAALMGIFILGPRAGRFNEDGTSNTMPQQSAVLQTLGTFMLWWGWLGFNAGSVSSFVATPAVAAKVMGVTVIGGASGGITSLLVN 278
BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: A0A6H5L6H3_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6H3_9PHAE) HSP 1 Score: 160 bits (404), Expect = 2.420e-43 Identity = 90/182 (49.45%), Postives = 114/182 (62.64%), Query Frame = 1
Query: 16 QWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEI---------------LLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSE-QPDSVAKSMVNTAVCPSGAAIVVMLIHW 513
+WAFAAT+ T+VSGA+AER+ + AY +++IT +IYP+V HW W+E GWASP R E+ LL GCG DF+G+GVVHMTGG+ ALVAA + PR RF G R+ QQSPAL LG LILW GW+ FN V S S + VA +MVNT + S AA V+ + W
Sbjct: 122 EWAFAATAATVVSGAVAERIKIAAYVQLSVLITFLIYPVVVHWVWSEGGWASPRRCEDTTTAVDYQLCREESRGLLLGCGATDFAGAGVVHMTGGMCALVAAKIVGPRTKRF-RNGIPNRMPQQSPALQTLGVLILWVGWYGFNGGSVGSVSNGRSHLVAAAMVNTTI--SAAASVLSVGLW 300
BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: A0A7S4DGA7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGA7_HETAK) HSP 1 Score: 153 bits (386), Expect = 1.170e-41 Identity = 86/180 (47.78%), Postives = 111/180 (61.67%), Query Frame = 1
Query: 1 WG-FLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVA--KSMVNTAV-----CPSGAAIVVMLIHWY 516
WG +L QWAFAAT+ TIV+GA+ ERV AY IY+I +T IYP++ HW W+ GWAS R +++LL GCG+ DF+GSGV+H TGG+ AL+ A + PR GRF ATG+ C + Q S LG L LW N GV S S+A ++MVNT + C SG IV +H Y
Sbjct: 36 WGMWLFQWAFAATTATIVNGAVVERVCFGAYIIYSICLTGFIYPLIVHWGWSAGGWASAWREDKLLL-GCGIIDFAGSGVIHTTGGVAALLGAYMIGPRKGRFSATGEVCEIPQLSWVYQTLGTLFLWFXXXXXN--GVSSMYAAGGSLAGARAMVNTTISGGAGCISGL-IVARFVHGY 211
BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: A0A6H5J7X8_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7X8_9PHAE) HSP 1 Score: 154 bits (388), Expect = 2.050e-41 Identity = 79/162 (48.77%), Postives = 104/162 (64.20%), Query Frame = 1
Query: 7 FLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPH-RPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVAKSMVNTAVCPSGAA 489
++ QWAFAA++TTIVSGA+AER AY +++ +IT+ IYP+VAHWAW++ GWAS ++ LL GCG + +GSGVVHMTGG+ AL + PR GRF+ G S + QQS L LG ILW GW FN + SF P A+ M T + SGA+
Sbjct: 110 WIFQWAFAASATTIVSGAMAERATFGAYVLHSFLITSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGAIELAGSGVVHMTGGMAALTGIFILGPRAGRFNEDGSSNTMPQQSAVLQTLGTFILWWGWLGFNGGSLPSFVSMPAVAARVMAVTVI--SGAS 269
BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI) HSP 1 Score: 153 bits (387), Expect = 3.010e-41 Identity = 81/167 (48.50%), Postives = 107/167 (64.07%), Query Frame = 1
Query: 7 FLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVAKSMVNTAVCPSGAAIVVMLI 507
+L QWAFAAT+ TIVSGA+AERV+ +AY IY++++T+ IYP+V HW W GWAS E++L CGV DF+GSGVVHMTGGL AL AA++ PR GRF+ G + L QQS L LG LILW G + + AK+MV T + + A+ +L+
Sbjct: 128 WLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWGG-GWASAWVDEDLLFD-CGVIDFAGSGVVHMTGGLAALAAAIVVGPRTGRFNEDGTANTLPQQSAVLQTLGTLILWFGXXXXXXVSTLAINGLAGVAAKTMVTTTISAAFGAVTTVLL 292
BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: D7G3S7_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3S7_ECTSI) HSP 1 Score: 153 bits (386), Expect = 6.180e-41 Identity = 81/171 (47.37%), Postives = 103/171 (60.23%), Query Frame = 1
Query: 4 GFLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVAKSMVNTAVCPSGAAIVVMLIHWY 516
G+L QWAFAAT+ TIVSGA+ ERV AY +YA+ + IYP+V HW W+ GWAS R E+L+ CGV DF+GSGVVHMTGG ALV AVL PR GRF G L Q S LG L LW GW+ FN + + A++MVNT + A + + + ++
Sbjct: 124 GWLFQWAFAATTATIVSGAVVERVTFGAYVVYAMCLLGFIYPVVVHWGWSAGGWASAWRETELLMD-CGVLDFAGSGVVHMTGGTAALVGAVLLGPRSGRF-IDGIPVELPQLSFVYQTLGTLCLWMGWYGFNGVSTLAIVGLGEVAARAMVNTTIAGGVACVTSVTVAYF 292
BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Match: A0A6V1QTK2_HETAK (Ammonium transporter n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QTK2_HETAK) HSP 1 Score: 151 bits (381), Expect = 2.330e-40 Identity = 78/172 (45.35%), Postives = 102/172 (59.30%), Query Frame = 1
Query: 4 GFLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWAETGWASPHRPEEILLAGCGVADFSGSGVVHMTGGLMALVAAVLTRPRGGRFDATGQSCRLEQQSPALNVLGGLILWAGWFFFNASGVRSFSEQPDSVAKSMVNTAVCPSGAAIVVMLIHWYH 519
G+L QWAFAAT+ TIV+G++AER+ AY +YA + + +YP V HW W GWAS R EE LL GCGV DF+GSGVVH TGG++AL A + PR GRF GQ ++ SP LG LILW GW+ FN + A++MV + + I +L+ H
Sbjct: 126 GWLFQWAFAATTATIVTGSVAERITFSAYLVYAFCLVSFVYPCVVHWGWNANGWASAWR-EEDLLFGCGVLDFAGSGVVHTTGGVVALWGAKILGPRTGRF-INGQKQEFKEVSPIYQTLGTLILWFGWYGFNGASTLYIGGYSAPAARAMVTSTISAGAGCISSVLLAKLH 295 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10153.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig10153.1.1 >prot_L-digitata_M_contig10153.1.1 ID=prot_L-digitata_M_contig10153.1.1|Name=mRNA_L-digitata_M_contig10153.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=179bp WGFLSQWAFAATSTTIVSGAIAERVALHAYFIYAIVITAVIYPMVAHWAWback to top mRNA from alignment at L-digitata_M_contig10153:1017..9240+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig10153.1.1 ID=mRNA_L-digitata_M_contig10153.1.1|Name=mRNA_L-digitata_M_contig10153.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=8224bp|location=Sequence derived from alignment at L-digitata_M_contig10153:1017..9240+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig10153:1017..9240+ >mRNA_L-digitata_M_contig10153.1.1 ID=mRNA_L-digitata_M_contig10153.1.1|Name=mRNA_L-digitata_M_contig10153.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=537bp|location=Sequence derived from alignment at L-digitata_M_contig10153:1017..9240+ (Laminaria digitata LdigPH10_18mv male)back to top |