prot_L-digitata_M_contig100163.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig100163.1.1
Unique Nameprot_L-digitata_M_contig100163.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length44
Homology
BLAST of mRNA_L-digitata_M_contig100163.1.1 vs. uniprot
Match: A0A6H5JAC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAC4_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 8.970e-14
Identity = 30/43 (69.77%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    1 MLCCHQPLVQIDELKFGPDAREFKPKRFVGNPDLKKDVSKFMF 43
            MLCCH PL+ IDE  FG DA EFKPKRF+GNPDLK DV  + F
Sbjct:  106 MLCCHHPLIHIDEAVFGADATEFKPKRFIGNPDLKDDVFAYAF 148          
BLAST of mRNA_L-digitata_M_contig100163.1.1 vs. uniprot
Match: A0A1L3HS58_ECTSI (Epoxyalcohol synthase CYP5164B1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=A0A1L3HS58_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 3.210e-12
Identity = 29/43 (67.44%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    1 MLCCHQPLVQIDELKFGPDAREFKPKRFVGNPDLKKDVSKFMF 43
            MLCCH PL+ IDE  FG DA EFKPKRF+GNP LK DV  + F
Sbjct:  363 MLCCHHPLIHIDEAVFGADATEFKPKRFIGNPGLKDDVFAYAF 405          
BLAST of mRNA_L-digitata_M_contig100163.1.1 vs. uniprot
Match: A0A6H5KDN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDN7_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 2.670e-7
Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    1 MLCCHQPLVQIDELKFGPDAREFKPKRFVGNPDLKK 36
            +L C Q L Q+D   FGPDAREFKP+RFVGNP+ +K
Sbjct:   20 VLLCKQALEQMDPSVFGPDAREFKPERFVGNPEPRK 55          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100163.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JAC4_9PHAE8.970e-1469.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1L3HS58_ECTSI3.210e-1267.44Epoxyalcohol synthase CYP5164B1 n=2 Tax=Ectocarpus... [more]
A0A6H5KDN7_9PHAE2.670e-763.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100163contigL-digitata_M_contig100163:569..700 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100163.1.1mRNA_L-digitata_M_contig100163.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig100163 548..700 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig100163.1.1 ID=prot_L-digitata_M_contig100163.1.1|Name=mRNA_L-digitata_M_contig100163.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=44bp
MLCCHQPLVQIDELKFGPDAREFKPKRFVGNPDLKKDVSKFMFL
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