prot_L-digitata_M_contig1015.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig1015.1.1
Unique Nameprot_L-digitata_M_contig1015.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length448
Homology
BLAST of mRNA_L-digitata_M_contig1015.1.1 vs. uniprot
Match: A0A6H5L574_9PHAE (PKD_channel domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L574_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 7.510e-93
Identity = 162/248 (65.32%), Postives = 190/248 (76.61%), Query Frame = 0
Query:  203 ILTFHKRMSIVADTLSGARTHLHHFLLVAFLVALVFMNLTWLLVGSRSEAFTTTAETWRSVIRIALGEYENFYPQIMEAQPTVGPVVVVVYQVLEVVLLLNVVIAVLLEVL--VVGGMQDEDTIFQSLVAFVGMTMCMGKEKIQWTNAYIRWWLLGGTSLHERRPSLKLSLQGPNSVCGVDGRPVLLIRSSSGSSLKPTKRQLSYNCPRYISVTDMKVLIKSAPVPAFVADRLVRKIVDEWIFRSTER 448
            +LTFHKRMSIV DTLS A THL+HFL V FLV L F  LTWLLVGS ++ F+T  + WRSVIRI+LGE ENFYPQI++AQPTVGPVVVV+YQVL VVLLLNVVIA+LLE    V  GM  EDTIFQS +AFVGM+ C    +I+W  A IRW  LGG   +  RPSLK+ LQG   VCGVDGRPV+++R    SS     RQLS+NCPRYI+VT+M+ LI++ PVPA VADRLVRKIV +W+FRS ER
Sbjct:    1 MLTFHKRMSIVTDTLSRASTHLNHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVASGMHGEDTIFQSFIAFVGMSWCSLTTRIRWATACIRW-RLGGRR-NTSRPSLKIFLQGSTGVCGVDGRPVVMVRRPPESSTI-LGRQLSFNCPRYITVTEMQALIEATPVPARVADRLVRKIVHDWVFRSDER 245          
BLAST of mRNA_L-digitata_M_contig1015.1.1 vs. uniprot
Match: D7FTQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ4_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 3.100e-55
Identity = 106/216 (49.07%), Postives = 145/216 (67.13%), Query Frame = 0
Query:    1 VAGGYPILIDTGGYNTGLNRGVCALLVMEDLDIIPPQEVKSVSVQLVTYNGNQKSAFGSIYVDFTFEDGGKITVTETISAYVLERSIQDSSDKRRWISVVLFVTLFIGMVRHDTSKWWRLRRSKARRNYWHCVCGFTFFALIAVIIVLFF--------------VSGDVSLSLSVVDCHYLVQEVVALHKVTLFASTYYFVVLLATMAGLYRWIFQ 202
            VA GYP+LI+TGG+N GLN G C LLVMEDLD+IP  EV+SV+VQLVTYNGNQ SAFGSI + FTF+ GG++   E ++AY+L  +    +D+ RWI  ++FV + + M+RHDT KW+R R +KARRN  HC CGFTFF LI + ++++               + G  S   SV+    L  +++AL +  LF+ + + + LL T+AGLYRWIFQ
Sbjct:  312 VASGYPVLIETGGFNIGLNFGYCTLLVMEDLDVIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDHGGEVEAHELVTAYILTGNAGQGNDRIRWILGLIFVCMTLAMIRHDTKKWYRARHAKARRNKCHCCCGFTFFTLIILNVLMWLGWASLGKVIAFDVVLQGTSSEEDSVMAA--LTGQILALQEAALFSWSLHIIFLLTTLAGLYRWIFQ 525          
BLAST of mRNA_L-digitata_M_contig1015.1.1 vs. uniprot
Match: D7FTQ7_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ7_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 8.160e-48
Identity = 95/135 (70.37%), Postives = 107/135 (79.26%), Query Frame = 0
Query:  203 ILTFHKRMSIVADTLSGARTHLHHFLLVAFLVALVFMNLTWLLVGSRSEAFTTTAETWRSVIRIALGEYENFYPQIMEAQPTVGPVVVVVYQVLEVVLLLNVVIAVLLEVL--VVGGMQDEDTIFQSLVAFVGMT 335
            +LTFHKRMSIV DTLS A THL HFL V FLV L F  LTWLLVGS ++ F+T  E W SV RI+LGE ENFYPQI++AQPTVGPV VV+YQVL VVLLLNVVIA+ LE    VV GM+ EDTIFQS +AFVGM+
Sbjct:    1 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLVEAWGSVTRISLGESENFYPQILDAQPTVGPVAVVLYQVLGVVLLLNVVIAIFLEAYRGVVSGMRGEDTIFQSFIAFVGMS 135          
BLAST of mRNA_L-digitata_M_contig1015.1.1 vs. uniprot
Match: D7FTQ6_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ6_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 1.280e-39
Identity = 82/121 (67.77%), Postives = 94/121 (77.69%), Query Frame = 0
Query:  203 ILTFHKRMSIVADTLSGARTHLHHFLLVAFLVALVFMNLTWLLVGSRSEAFTTTAETWRSVIRIALGEYENFYPQIMEAQPTVGPVVVVVYQVLEVVLLLNVVIAVLLEVLVVGGMQDEDT 323
            +LTFHKRMSIV DTLS A THL HFL V FLV L F  LTWLLVGS ++ F+T  + W+SV RI+LGE ENFYPQI++AQPTVGPVVVV+YQVL VVLLLNVVIA+LLE  +     D  T
Sbjct:   32 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLETFLAASAADGTT 152          
BLAST of mRNA_L-digitata_M_contig1015.1.1 vs. uniprot
Match: A0A6H5JIW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIW8_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 6.080e-24
Identity = 65/141 (46.10%), Postives = 82/141 (58.16%), Query Frame = 0
Query:  167 LVQEVVALHKVTLFASTYYFVVLLATMAGLYRWIFQILTFHKRMSIVADTLSGARTHLHHFLLVAFL--------------------------VALVFMNLTWLLVGSRSEAFTTTAETWRSVIRIALGEYENFYPQIMEA 281
            L   ++AL +  LF+ + Y + LL T+AGLY WIFQ+ TFHKRMSIV DTLS A THL  FL V FL                          V L F  LT+LLVGS ++  +T  + WRSVIRI+ GE +N YPQI++A
Sbjct:   21 LTGPILALQEAELFSWSLYIIFLLTTLAGLYPWIFQMFTFHKRMSIVPDTLSRASTHLTQFLFVFFLERLTQLPDKRCLGVLVLVVVLTTPMVVVLAFAALTFLLVGSSTKEISTLEDAWRSVIRISPGESDNLYPQILDA 161          
BLAST of mRNA_L-digitata_M_contig1015.1.1 vs. uniprot
Match: A0A6H5JES1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JES1_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.770e-22
Identity = 70/159 (44.03%), Postives = 84/159 (52.83%), Query Frame = 0
Query:  314 VVGGMQDEDTIFQSLVAFVGMTM--------------------CMGKEKIQWTNAYIRWWLLGGTSLHE----RRPSLKLSLQGPNSVCGVDGRPVLLIRSSSGSSLKPTKRQLSYNCPRYISVTDMKVLIKSAPVPAFVADRLVRKIVDEWIFRSTER 448
            VV GM+ EDTI  S +AFVGM+                     C+ K  I+W  AYIRW L G  +       RRPSL++ LQG   VCGVDGRPV+++R    SS     RQL               LI++ PVPA VA RLVRKIV EW+FRS ER
Sbjct:   18 VVSGMRGEDTILPSFIAFVGMSWWVLHSRQTARQPEQILTSVSCVLKTGIRWATAYIRWRLAGRRNTPPQDGPRRPSLRMFLQGSTGVCGVDGRPVVMVRGLPESSTI-LGRQLP------------AALIEAFPVPARVAGRLVRKIVHEWVFRSDER 163          
BLAST of mRNA_L-digitata_M_contig1015.1.1 vs. uniprot
Match: D7G2W7_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W7_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 3.210e-21
Identity = 94/350 (26.86%), Postives = 174/350 (49.71%), Query Frame = 0
Query:    5 YPILIDTGGYNTGLNRGVCALLVMEDLDIIPPQEVKSVSVQLVTYNGNQKSAFGSIYVDFTFEDGGKITVTETISAYVLERSIQDS-SDKRRWISVVLFVTLFIGMVRHDTSKWWRLRRSKARR---NYWHC-VCGFTFFALIAVIIVLFFVSGDVSLSLSVVDCHYL--VQEVVALHKVTLFASTYYFVVL----------LATMAGLYRWIFQILTFHKRMSIVADTLSGARTHLHHFLLVAFLVALVFMNLTWLLVGSRSEAFTTTAETWRSVIRIALGEYENFYPQIMEAQPTVGPVVVVVYQVLEVVLLLNVVIAVLLEVLVVGGMQDE----DTIFQSLVAFVG 333
            Y I  D G +N+GLN  +C +L +     +    V+SVS++  TYNG     F  + +   F  GG++ +  ++  + +      S +   R I++  F  + +  +  D  + WR  R    R   +  H  V   T   L+   + L+ +   V+++++      +  +    A  +V  F+     V L            ++ GL R +F +L FH R+S+V D L+ +  HL HF ++ F+V  V+ NL W++ G  S  F T  +++ ++ RIALGE++N YP ++E       +++V YQ L+ +LLLN+VI++LL+   +   ++     DT++Q+++  +G
Sbjct:   28 YSITTDIGVFNSGLNFNLCGMLAILGGPDVMTDAVRSVSLRFNTYNGQCDGLFSFVDITALFTLGGEVKMVTSVEVFSMPFFFGSSPAIVGRAIAMFAFGLMLVIYIGKDVLRAWREVRDGRHRLSMSLRHVPVTTATALNLVGDCVFLWNLVLWVNVAVTAAKFELIPTLSYNNASEQVRAFSEELALVALERWKRDAAAVAGSIFGLTR-LFIMLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWTKSFVTMTRIALGEFDNIYPLMVEIDGAAAFMIIVTYQTLQCILLLNIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLG 376          
BLAST of mRNA_L-digitata_M_contig1015.1.1 vs. uniprot
Match: A0A6H5JEJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ3_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 3.980e-14
Identity = 40/64 (62.50%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    4 GYPILIDTGGYNTGLNRGVCALLVMEDLDIIPPQEVKSVSVQLVTYNGNQKSAFGSIYVDFTFE 67
            GYP +  +      LN G C LLVMEDLD+IP  EV+SV+VQLVTYNGNQ SAFGSI + FTF+
Sbjct:   45 GYPSVRASKWSTAELNFGYCTLLVMEDLDVIPRHEVRSVNVQLVTYNGNQGSAFGSINLGFTFD 108          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig1015.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5L574_9PHAE7.510e-9365.32PKD_channel domain-containing protein n=1 Tax=Ecto... [more]
D7FTQ4_ECTSI3.100e-5549.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTQ7_ECTSI8.160e-4870.37Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
D7FTQ6_ECTSI1.280e-3967.77Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5JIW8_9PHAE6.080e-2446.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JES1_9PHAE1.770e-2244.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2W7_ECTSI3.210e-2126.86Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5JEJ3_9PHAE3.980e-1462.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 42..311
e-value: 4.3E-14
score: 52.0
NoneNo IPR availableGENE3D1.10.287.70coord: 208..314
e-value: 5.4E-5
score: 25.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig1015contigL-digitata_M_contig1015:15744..23435 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig1015.1.1mRNA_L-digitata_M_contig1015.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig1015 15744..23435 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig1015.1.1 ID=prot_L-digitata_M_contig1015.1.1|Name=mRNA_L-digitata_M_contig1015.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=448bp
VAGGYPILIDTGGYNTGLNRGVCALLVMEDLDIIPPQEVKSVSVQLVTYN
GNQKSAFGSIYVDFTFEDGGKITVTETISAYVLERSIQDSSDKRRWISVV
LFVTLFIGMVRHDTSKWWRLRRSKARRNYWHCVCGFTFFALIAVIIVLFF
VSGDVSLSLSVVDCHYLVQEVVALHKVTLFASTYYFVVLLATMAGLYRWI
FQILTFHKRMSIVADTLSGARTHLHHFLLVAFLVALVFMNLTWLLVGSRS
EAFTTTAETWRSVIRIALGEYENFYPQIMEAQPTVGPVVVVVYQVLEVVL
LLNVVIAVLLEVLVVGGMQDEDTIFQSLVAFVGMTMCMGKEKIQWTNAYI
RWWLLGGTSLHERRPSLKLSLQGPNSVCGVDGRPVLLIRSSSGSSLKPTK
RQLSYNCPRYISVTDMKVLIKSAPVPAFVADRLVRKIVDEWIFRSTER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013122PKD1_2_channel