prot_L-digitata_M_contig10014.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10014.1.1
Unique Nameprot_L-digitata_M_contig10014.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length55
Homology
BLAST of mRNA_L-digitata_M_contig10014.1.1 vs. uniprot
Match: D8LDJ5_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDJ5_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 4.310e-18
Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    3 VSSLCGQHCINNLVQGSSYSAPDLADIAHELDRQERQHMLSEGANTPDALRLV 55
            +SSLCGQHCINNLVQ +SYSA DLADIA ELD QERQHML+ G++TPDAL+ +
Sbjct:    1 MSSLCGQHCINNLVQAASYSAADLADIALELDDQERQHMLAAGSDTPDALKFL 53          
BLAST of mRNA_L-digitata_M_contig10014.1.1 vs. uniprot
Match: A0A836CJ83_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ83_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 9.940e-16
Identity = 36/54 (66.67%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 KQVSSLCGQHCINNLVQGSSYSAPDLADIAHELDRQERQHMLSEGANTPDALRL 54
            KQ SSLCGQHC+NNL+Q   ++APDLADIAH LD +ERQ ML  G +TPDAL+ 
Sbjct:    8 KQESSLCGQHCLNNLLQACIFTAPDLADIAHVLDAKERQLMLELGHSTPDALKF 61          
BLAST of mRNA_L-digitata_M_contig10014.1.1 vs. uniprot
Match: A0A7S4DEZ6_HETAK (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEZ6_HETAK)

HSP 1 Score: 71.6 bits (174), Expect = 2.100e-14
Identity = 33/55 (60.00%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 KQVSSLCGQHCINNLVQGSSYSAPDLADIAHELDRQERQHMLSEGANTPDALRLV 55
            KQ S LCGQHC+NNL+QG  + AP LA I  ELD +ER+ ML  GA+TP+ALR +
Sbjct:   16 KQFSLLCGQHCLNNLLQGPYFDAPGLAQIGQELDAEERRVMLEAGADTPEALRFL 70          
BLAST of mRNA_L-digitata_M_contig10014.1.1 vs. uniprot
Match: A0A7S2SLM5_9STRA (Ubiquitinyl hydrolase 1 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLM5_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.950e-13
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    1 KQVSSLCGQHCINNLVQGSSYSAPDLADIAHELDRQERQHMLSEGANTPDALRLV 55
            +Q S+LCGQHC+NNL+QG+ +S  DLADIA E+DR ERQ ML  G  TP+AL+ +
Sbjct:   20 RQESALCGQHCLNNLLQGTYFSPGDLADIAAEMDRLERQMMLEMGDATPEALKFL 74          
BLAST of mRNA_L-digitata_M_contig10014.1.1 vs. uniprot
Match: D3BL88_POLPP (Ubiquitinyl hydrolase 1 n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BL88_POLPP)

HSP 1 Score: 64.3 bits (155), Expect = 7.770e-11
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0
Query:    2 QVSSLCGQHCINNLVQGSSYSAPDLADIAHELDRQERQHMLSEGANTPDALRLV 55
            QV+SLCG HC+N L+QGS ++A DLA++AHELD +ER  ML  G ++ D ++  
Sbjct:    9 QVASLCGVHCLNTLLQGSYFTAVDLANVAHELDEKERDVMLQAGVDSSDFIKFA 62          
BLAST of mRNA_L-digitata_M_contig10014.1.1 vs. uniprot
Match: A0A8J4PS66_9MYCE (Ubiquitinyl hydrolase 1 n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PS66_9MYCE)

HSP 1 Score: 64.3 bits (155), Expect = 8.310e-11
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    1 KQVSSLCGQHCINNLVQGSSYSAPDLADIAHELDRQERQHMLSEGANTPDALRLV 55
            KQV+SLCG HC+N L+QGS ++  DLA +A ELD+QER+ M   G  T D L+ V
Sbjct:   13 KQVASLCGVHCLNTLLQGSYFTEIDLAHVAQELDKQEREMMSENGFETKDFLKFV 67          
BLAST of mRNA_L-digitata_M_contig10014.1.1 vs. uniprot
Match: A0A7I8VG35_9ANNE (Ubiquitinyl hydrolase 1 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VG35_9ANNE)

HSP 1 Score: 63.2 bits (152), Expect = 1.840e-10
Identity = 28/48 (58.33%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    1 KQVSSLCGQHCINNLVQGSSYSAPDLADIAHELDRQERQHMLSEGANT 48
            KQ  SLCGQHC+NNL+QG+ +SA DLAD+A +LD  ER H+ S  ++T
Sbjct:    8 KQEGSLCGQHCLNNLLQGAYFSAVDLADLASQLDETERSHLGSNSSST 55          
BLAST of mRNA_L-digitata_M_contig10014.1.1 vs. uniprot
Match: UPI000644D6F3 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644D6F3)

HSP 1 Score: 61.6 bits (148), Expect = 7.320e-10
Identity = 26/55 (47.27%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 KQVSSLCGQHCINNLVQGSSYSAPDLADIAHELDRQERQHMLSEGANTPDALRLV 55
            KQ++SLCG HC+N+L+QGS ++A DLA++AH+LD++E   M   G +T D ++  
Sbjct:    8 KQLASLCGVHCLNSLLQGSYFTAVDLANVAHQLDQEEMDVMSQAGMDTSDFIKFA 62          
BLAST of mRNA_L-digitata_M_contig10014.1.1 vs. uniprot
Match: A0A5N5T5Y4_9CRUS (Ubiquitinyl hydrolase 1 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5T5Y4_9CRUS)

HSP 1 Score: 57.8 bits (138), Expect = 1.220e-9
Identity = 25/50 (50.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 KQVSSLCGQHCINNLVQGSSYSAPDLADIAHELDRQERQHMLSEGANTPD 50
            KQ  SLCGQHC+NNL+Q   +SA +LA+IA ++D++E + M   G NT +
Sbjct:   29 KQEGSLCGQHCLNNLLQDQYFSAVELAEIAQQMDQEETRRMAELGTNTSE 78          
BLAST of mRNA_L-digitata_M_contig10014.1.1 vs. uniprot
Match: A0A8J5MRG4_HOMAM (Ubiquitinyl hydrolase 1 n=3 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5MRG4_HOMAM)

HSP 1 Score: 60.8 bits (146), Expect = 1.810e-9
Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 KQVSSLCGQHCINNLVQGSSYSAPDLADIAHELDRQERQHMLSEGANTPDALRLV 55
            KQ   LCGQHC+NNL+QG  ++A DLADIA ++D+ E+ HM   G +T +  R +
Sbjct:    8 KQDGLLCGQHCLNNLLQGQYFTAVDLADIAQQMDQAEQSHMAELGMHTDEFRRFM 62          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10014.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDJ5_ECTSI4.310e-1875.47Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJ83_9STRA9.940e-1666.67Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DEZ6_HETAK2.100e-1460.00Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Heteros... [more]
A0A7S2SLM5_9STRA4.950e-1360.00Ubiquitinyl hydrolase 1 n=2 Tax=Rhizochromulina ma... [more]
D3BL88_POLPP7.770e-1151.85Ubiquitinyl hydrolase 1 n=1 Tax=Polysphondylium pa... [more]
A0A8J4PS66_9MYCE8.310e-1154.55Ubiquitinyl hydrolase 1 n=1 Tax=Polysphondylium vi... [more]
A0A7I8VG35_9ANNE1.840e-1058.33Ubiquitinyl hydrolase 1 n=1 Tax=Dimorphilus gyroci... [more]
UPI000644D6F37.320e-1047.27hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A5N5T5Y4_9CRUS1.220e-950.00Ubiquitinyl hydrolase 1 n=1 Tax=Armadillidium nasa... [more]
A0A8J5MRG4_HOMAM1.810e-949.09Ubiquitinyl hydrolase 1 n=3 Tax=Homarus americanus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006155Josephin domainPFAMPF02099Josephincoord: 2..51
e-value: 1.3E-14
score: 54.6
IPR006155Josephin domainPROSITEPS50957JOSEPHINcoord: 1..55
score: 12.992265
NoneNo IPR availableGENE3D1.10.287.10coord: 21..55
e-value: 3.0E-9
score: 38.6
IPR033865Machado-Joseph disease proteinPANTHERPTHR14159ATAXIN-3-RELATEDcoord: 1..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10014contigL-digitata_M_contig10014:236..400 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10014.1.1mRNA_L-digitata_M_contig10014.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10014 236..400 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10014.1.1 ID=prot_L-digitata_M_contig10014.1.1|Name=mRNA_L-digitata_M_contig10014.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=55bp
KQVSSLCGQHCINNLVQGSSYSAPDLADIAHELDRQERQHMLSEGANTPD
ALRLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006155Josephin
IPR033865Ataxin-3