prot_L-digitata_M_contig10116.3.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10116.3.1
Unique Nameprot_L-digitata_M_contig10116.3.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length219
Homology
BLAST of mRNA_L-digitata_M_contig10116.3.1 vs. uniprot
Match: A0A6H5J6N0_9PHAE (Epimerase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J6N0_9PHAE)

HSP 1 Score: 428 bits (1100), Expect = 5.660e-149
Identity = 205/219 (93.61%), Postives = 215/219 (98.17%), Query Frame = 0
Query:    1 AGKALIAQNKGGGHGEIGYHLALKLIEKDISVTVLQDSAGNNKDKQPFASYGELESKGATIVWGDFSEGVGKLVPEGESFDYVFDNYAKDVDTCKNLADCAKAWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRQVEKHVAELGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGLEFIPLPLHGDQLVALTHAEDVASMLASVVGNENAVNQV 219
            +GKALIAQNKGGGHGE+GYHLALKLIEKDISVT+LQD AG NKD QPFASYG+LESKGATIVWGDFSEGVGKL+PEGESFDYVFDNYAKDVDTCK+LADC+KAWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRQVEK+VA+LGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGLEFIPLPLHGDQLVALTHAEDVASMLASVVGNE AV+QV
Sbjct:   49 SGKALIAQNKGGGHGELGYHLALKLIEKDISVTLLQDGAGKNKDNQPFASYGDLESKGATIVWGDFSEGVGKLIPEGESFDYVFDNYAKDVDTCKDLADCSKAWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRQVEKYVADLGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGLEFIPLPLHGDQLVALTHAEDVASMLASVVGNERAVDQV 267          
BLAST of mRNA_L-digitata_M_contig10116.3.1 vs. uniprot
Match: A0A836C9R0_9STRA (Epimerase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R0_9STRA)

HSP 1 Score: 312 bits (799), Expect = 1.090e-102
Identity = 155/221 (70.14%), Postives = 177/221 (80.09%), Query Frame = 0
Query:    1 AGKALIAQNKGGGHGEIGYHLALKLIEKDISVTVLQDSAGNNKDKQPFASYGELESKGATIVWGDFSE--GVGKLVPEGESFDYVFDNYAKDVDTCKNLADCAKAWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRQVEKHVAELGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGLEFIPLPLHGDQLVALTHAEDVASMLASVVGNENAVNQV 219
            AGKALI QNKGGGHGE+GYHLA  L EK + VT+LQDSA   K KQPFASYGELESKG  +VWGDF+   GVG  +P  E+FDYVFDNYAKD  T K++A  AK+W VKNY YVSS GMYK+++EVP  E+  VKE+GQRQVE    E+GLPWTSFRPQYIYGPLTNKRDYLDWF+DRVV  +   PLP HGDQ VA+THAEDVASMLA+VVGN +AV Q+
Sbjct:   45 AGKALIVQNKGGGHGELGYHLANILQEKGVEVTLLQDSAAK-KAKQPFASYGELESKGVKVVWGDFAGEGGVGASLPSDEAFDYVFDNYAKDPATAKDVAVAAKSWSVKNYVYVSSAGMYKNTEEVPLVETDAVKETGQRQVELMAEEMGLPWTSFRPQYIYGPLTNKRDYLDWFYDRVVWAMSPFPLPHHGDQFVAITHAEDVASMLAAVVGNPSAVGQI 264          
BLAST of mRNA_L-digitata_M_contig10116.3.1 vs. uniprot
Match: A0A7S2XZ15_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ15_9STRA)

HSP 1 Score: 253 bits (647), Expect = 6.590e-80
Identity = 127/223 (56.95%), Postives = 153/223 (68.61%), Query Frame = 0
Query:    1 AGKALIAQNKGGGHGEIGYHLALKLIEKDI----SVTVLQDSAGNNKDKQPFASYGELESKGATIVWGDFSEGVGKLVPEGESFDYVFDNYAKDVDTCKNLADCAKAWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRQVEKHVAELGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGLEFIPLPLHGDQLVALTHAEDVASMLASVVGNENAVNQV 219
            A  ALI QNKGGGHGE+GYHLA  L   ++    SVT++ D       K PF  YG L+  G  ++W D        +   ++F YVFDNYAKD DTCK +AD +K W V NY YVSS GMYK +DEVP TES+  KE+GQ+ VE++ A +GLPWT+FRPQYIYGPLTNKRDYLDWFF RV    + +PLP  GDQ VA+THA DVASM ASV+GN+ A  QV
Sbjct:   47 ASAALIVQNKGGGHGELGYHLAKILSSPEVPQVTSVTIINDGGPEPVQKLPFTEYGGLD--GVDVIWADIKSADIPALLGDKTFKYVFDNYAKDEDTCKAVADLSKKWDVDNYVYVSSAGMYKSTDEVPMTESTATKETGQKAVEEYAASIGLPWTAFRPQYIYGPLTNKRDYLDWFFHRVCRDRD-VPLPNSGDQFVAITHAADVASMFASVIGNDKAPEQV 266          
BLAST of mRNA_L-digitata_M_contig10116.3.1 vs. uniprot
Match: A0A7S2BN61_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BN61_9STRA)

HSP 1 Score: 249 bits (635), Expect = 1.840e-78
Identity = 127/219 (57.99%), Postives = 158/219 (72.15%), Query Frame = 0
Query:    2 GKALIAQNKGGGHGEIGYHLALKLIEKDISVTVLQDSAGNNKD-KQPFASYGELESKGATIVWGDFSEGVGKLVPEGESFDYVFDNYAKDVDTCKNLADCAKAWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRQVEKHVAELGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGLEFIPLPLHGDQLVALTHAEDVASMLASVVGNENAVNQV 219
            G+ALI QNKGGGHGE+G+HLA  L +K ISVT+L D     K  KQP+ SY +LE KG  IVW D +      + EG +F+YVFDN++KD D+     D AK+W V NY +VSS GMY+ S   P  ES+DVK SGQR+VE  +AE GLPWTSFRPQYIYGP TNKRDYLDWFFDR V G + +P+P  G Q V++T+A+DVAS+LAS +GN +AV +V
Sbjct:   62 GRALIIQNKGGGHGELGFHLAGILEKKGISVTLLHDGGPEPKSGKQPWDSYTQLEGKGVEIVWSDVAASGSASLKEGPAFEYVFDNWSKDPDSATGFVDLAKSWDVSNYVFVSSAGMYESSVPQPMVESADVKLSGQRKVEVLLAENGLPWTSFRPQYIYGPNTNKRDYLDWFFDRAVRG-KTLPIPEDGSQGVSITNAQDVASLLASPLGNADAVGEV 279          
BLAST of mRNA_L-digitata_M_contig10116.3.1 vs. uniprot
Match: A0A6V1PCS3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PCS3_HETAK)

HSP 1 Score: 236 bits (601), Expect = 1.220e-73
Identity = 125/221 (56.56%), Postives = 156/221 (70.59%), Query Frame = 0
Query:    2 GKALIAQNKGGGHGEIGYHLALKLIEKD--ISVTVLQDSAGNNKDKQPFASYGELESKGATIVWGDFS-EGVGKLVPEGESFDYVFDNYAKDVDTCKNLADCAKAWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRQVEKHVAELGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGLEFIPLPLHGDQLVALTHAEDVASMLASVVGNENAVNQV 219
            G ALI QNKGGGHGEIG+HLA  L E+    +VT+LQD  G    K PF+ YGELE+ G  +VW D   EGV +L   G+ FDYVFDN++KD  T K +AD AKA  V+ +AYVSSGGMYK    +P TE +D KE+GQR+VEK++   GLPWT+FRPQYIYGP TNKRDYLD+F DR+    + +P+P  G+QL ++THA DVA+MLA+   N  A  QV
Sbjct:   42 GSALIVQNKGGGHGEIGFHLAKILKEEKGCDAVTILQDG-GEPSGKLPFSRYGELEALGCEVVWCDVKGEGVARLA--GKKFDYVFDNWSKDEATVKPIADMAKAQNVETFAYVSSGGMYKYPPTLPITEDADAKETGQREVEKYLDAAGLPWTAFRPQYIYGPATNKRDYLDYFVDRISRD-QPVPIPHSGEQLASVTHAYDVAAMLAAATANPKAAKQV 258          
BLAST of mRNA_L-digitata_M_contig10116.3.1 vs. uniprot
Match: A0A0G4IC15_9ALVE (Epimerase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IC15_9ALVE)

HSP 1 Score: 232 bits (592), Expect = 4.410e-72
Identity = 121/219 (55.25%), Postives = 146/219 (66.67%), Query Frame = 0
Query:    1 AGKALIAQNKGGGHGEIGYHLALKLIEKDISVTVLQDSAGNNKDKQPFASYGELESKGATIVWGDFSEGVGKLVPEGESFDYVFDNYAKDVDTCKNLADCAKAWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRQVEKHVAELGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGLEFIPLPLHGDQLVALTHAEDVASMLASVVGNENAVNQV 219
            +G ALI QNKGGGHGEIG+HLA  L  K I VT+L D  G+   K PF  Y +L +    ++W D S      +  G++FDYVFDN +K+    K +AD AK WGVKNY YVSSGGMYK   E+P  E   VKE+GQ +VEK+   +GLPW+SFRPQYIYGP TNKRDYLD+FF RV +    IP+P        LTH EDVASMLA+V+GN NA  QV
Sbjct:   49 SGNALILQNKGGGHGEIGFHLAKLLNSKGIGVTILNDG-GSPISKTPFNMYDQLSN--TEVIWTDLSSADVPSLLSGKTFDYVFDNVSKNEAGAKTVADLAKQWGVKNYVYVSSGGMYKGGVEMPMEEGDPVKETGQLEVEKYADSIGLPWSSFRPQYIYGPFTNKRDYLDFFFHRVANDAP-IPIPGQPSTCTTLTHVEDVASMLAAVIGNPNAPKQV 263          
BLAST of mRNA_L-digitata_M_contig10116.3.1 vs. uniprot
Match: A0A7S0QRB5_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QRB5_9CRYP)

HSP 1 Score: 224 bits (570), Expect = 4.430e-69
Identity = 120/217 (55.30%), Postives = 150/217 (69.12%), Query Frame = 0
Query:    4 ALIAQNKGGGHGEIGYHLALKLIEKDISVTVLQDSAGNNKDKQPFASYGELESKGATIVWGDFSEGVGKLVPE--GESFDYVFDNYAKDVDTCKNLADCAKA-WGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRQVEKHVAELGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGLEFIPLPLHGDQLVALTHAEDVASMLASVVGNENAVN 217
            ALI QNKGGGHGEIGYHLA +L  K ++VT+LQD+A    DK PF  Y  L+SK    V     E    +  +  G++F +VFDN+AKD  T + +A  A A W VK+YAYVSSGGMYK     P TE +  KE+GQR+VE+ +A  GLPWTSFRPQYIYGP TNKRDYLDWFF+R+V      PLP +G+QL++++H EDVA M+A VVG E A +
Sbjct:   23 ALIVQNKGGGHGEIGYHLAKQLSSKGLAVTLLQDAAAK-MDKPPFNDYELLKSKHGVEVLACKLEDPADIKDKLAGKAFSHVFDNFAKDKATAETVAGLATAGWDVKSYAYVSSGGMYKSGAAQPMTEDAATKETGQREVEQFLAAAGLPWTSFRPQYIYGPFTNKRDYLDWFFNRIVRDRP-CPLPGNGEQLLSISHVEDVARMMAGVVGKEAAAS 237          
BLAST of mRNA_L-digitata_M_contig10116.3.1 vs. uniprot
Match: A0A7S2U5K3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U5K3_9EUKA)

HSP 1 Score: 223 bits (568), Expect = 1.290e-68
Identity = 118/211 (55.92%), Postives = 146/211 (69.19%), Query Frame = 0
Query:    1 AGKALIAQNKGGGHGEIGYHLALKLIEKDISVTVLQDSAGNNKDKQPFASYGELESKGATIVWGDFSEGVGKLVPEGESFDYVFDNYAKDVDTCKNLADCAKAWGVKNYAYVSSGGMYKDSDEVPFTESSDVKES-GQRQVEKHVAELGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGLEFIPLPLHGDQLVALTHAEDVASMLASVV 210
            A + LI QNKGGGHGEIGYHLA KL     SVT++ D A       PF+ YG+L+SKG T V+ D  +        G+ FD V+DN+AK  DTC   AD AK WGV +Y YVSS GMYK  + +P  E+ +VK++ GQ++VE H+  +GLPWTSFRPQYIYGPLTNKRDYLD+FFDRVV G   +P+   G QLV LTHA DVA M+AS++
Sbjct:   36 ASRVLIIQNKGGGHGEIGYHLANKLASDGHSVTIMGDPA-TKLQSLPFSRYGDLKSKGVTTVFADPCD-PSSFANLGQ-FDVVYDNFAKGKDTCAVAADLAKQWGVSHYGYVSSAGMYKPGNLMPMVETLNVKDTAGQKEVEDHLDRMGLPWTSFRPQYIYGPLTNKRDYLDYFFDRVVRGRP-VPVAGSGQQLVTLTHAADVAGMMASII 242          
BLAST of mRNA_L-digitata_M_contig10116.3.1 vs. uniprot
Match: I2CPE2_NANGC (NAD(P)-bd_dom domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPE2_NANGC)

HSP 1 Score: 223 bits (569), Expect = 1.350e-68
Identity = 118/217 (54.38%), Postives = 143/217 (65.90%), Query Frame = 0
Query:    4 ALIAQNKGGGHGEIGYHLALKLI-EKDISVTVLQDSAGNNKDKQPFASYGELESKGATIVWGDFSEGVGKLVPEGESFDYVFDNYAKDVDTCKNLADCAKAWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRQVEKHVAELGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGLEFIPLPLHGDQLVALTHAEDVASMLASVVGNENAVNQV 219
            ALI QNKGGGHGEIGYHLALKL+ EK + VT+L D   + K  QPF SYG+L   G  I+  D      K +  G SF YVFDN+AK  +      D A+AW ++ Y +VSSGGMY+  D  P  E S V  +  R++E  +   GLP+T FRPQYIYGPLT+KRDYLDWFF R+V     +PLPLHGDQ   LTH EDVAS+LA+VV N  A+ QV
Sbjct:   55 ALIIQNKGGGHGEIGYHLALKLVKEKGLQVTLLNDKYDDQK--QPFKSYGDLTGAGVDILSADLGSADVKSLLSGRSFHYVFDNFAKSSEALPPFLDLARAWPLQVYVFVSSGGMYQVEDSFPLLEDSPVALNEPRKIELAIEASGLPYTFFRPQYIYGPLTSKRDYLDWFFHRLVRDKP-LPLPLHGDQFTTLTHVEDVASLLAAVVDNPQALRQV 268          
BLAST of mRNA_L-digitata_M_contig10116.3.1 vs. uniprot
Match: A0A7S2G0W8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G0W8_9STRA)

HSP 1 Score: 221 bits (564), Expect = 7.010e-68
Identity = 117/220 (53.18%), Postives = 150/220 (68.18%), Query Frame = 0
Query:    2 GKALIAQNKGGGHGEIGYHLALKLIEK-DISVTVLQDSAGNNKD-KQPFASYGELESKGATIVWGDFSEGVGKLVPEGESFDYVFDNYAKDVDTCKNLADCAKAWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRQVEKHVAELGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVVHGLEFIPLPLHGDQLVALTHAEDVASMLASVVGNENAVNQV 219
            G+AL+ QNKGGGHGE+GYHL L L +K  + VT++ D   + K  K+P+ SY  LE+ G  IVW D   G+  L  E   F++VFDN++KD D  K   + AK+WGV NY +VSS GMY  S +    ES DVKE+GQR VEK +A+ GLPWTSFRPQYIYGP TNKRDYLD+FF+R    +  IP P  G+Q +  T+AEDVA++LA+ V N  AV +V
Sbjct:   64 GRALVVQNKGGGHGELGYHLCLTLADKYGLEVTMVHDGGPDAKTGKEPWDSYKNLEAAGVEIVWADLGAGMPSLTGE---FEFVFDNWSKDADLAKPYVEAAKSWGVSNYVFVSSAGMY--SGKGSLKESDDVKETGQRAVEKMLADQGLPWTSFRPQYIYGPYTNKRDYLDFFFNRAARNMP-IPCPEGGEQGLCCTNAEDVAALLATPVANPAAVGEV 277          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10116.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J6N0_9PHAE5.660e-14993.61Epimerase domain-containing protein n=2 Tax=Ectoca... [more]
A0A836C9R0_9STRA1.090e-10270.14Epimerase domain-containing protein (Fragment) n=1... [more]
A0A7S2XZ15_9STRA6.590e-8056.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2BN61_9STRA1.840e-7857.99Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V1PCS3_HETAK1.220e-7356.56Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4IC15_9ALVE4.410e-7255.25Epimerase domain-containing protein n=1 Tax=Chrome... [more]
A0A7S0QRB5_9CRYP4.430e-6955.30Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S2U5K3_9EUKA1.290e-6855.92Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
I2CPE2_NANGC1.350e-6854.38NAD(P)-bd_dom domain-containing protein n=1 Tax=Na... [more]
A0A7S2G0W8_9STRA7.010e-6853.18Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 12..219
e-value: 4.6E-28
score: 100.4
NoneNo IPR availablePANTHERPTHR43725:SF6CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA A, CHLOROPLASTICcoord: 3..217
NoneNo IPR availablePANTHERPTHR43725UDP-GLUCOSE 4-EPIMERASEcoord: 3..217
IPR001509NAD-dependent epimerase/dehydratasePFAMPF01370Epimerasecoord: 12..212
e-value: 2.8E-10
score: 40.0
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 12..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10116contigL-digitata_M_contig10116:7325..9210 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10116.3.1mRNA_L-digitata_M_contig10116.3.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10116 7325..9210 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10116.3.1 ID=prot_L-digitata_M_contig10116.3.1|Name=mRNA_L-digitata_M_contig10116.3.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=219bp
AGKALIAQNKGGGHGEIGYHLALKLIEKDISVTVLQDSAGNNKDKQPFAS
YGELESKGATIVWGDFSEGVGKLVPEGESFDYVFDNYAKDVDTCKNLADC
AKAWGVKNYAYVSSGGMYKDSDEVPFTESSDVKESGQRQVEKHVAELGLP
WTSFRPQYIYGPLTNKRDYLDWFFDRVVHGLEFIPLPLHGDQLVALTHAE
DVASMLASVVGNENAVNQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR036291NAD(P)-bd_dom_sf