prot_L-digitata_M_contig100944.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig100944.1.1
Unique Nameprot_L-digitata_M_contig100944.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length138
Homology
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BLAST of mRNA_L-digitata_M_contig100944.1.1 vs. uniprot
Match: UPI001C657F1A (hypothetical protein n=1 Tax=Shewanella sp. FJAT-53749 TaxID=2864206 RepID=UPI001C657F1A)

HSP 1 Score: 90.9 bits (224), Expect = 5.690e-20
Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 0 
Query:    3 VYTLQPGETRNIQTPSKFLSILELDGLLSVASSSYGLKPLRVKPGWQLELDGIPEVAIENVDAQAVTVELQDAGVRISGGGGGSVSITNKPVIKRIEEPLDFQANVTFNGGAVELI 118
            + TLQ GETR   T  ++ +++       +++S+ GL   ++K GW ++L+  P V IEN  +  +T+ELQ + ++I+  GG SVSI+NKP+I+RIEE +   A  T   G V ++
Sbjct:    2 IITLQAGETRLFPTAGRYFNVIAASDTFELSNSALGLAANQIKAGWIVDLEKYPSVDIENKHSYPITLELQSSQLKINAAGGESVSISNKPIIQRIEESIRVDAQATVENGTVHVV 117
[Close]
BLAST of mRNA_L-digitata_M_contig100944.1.1 vs. uniprot
Match: UPI001C09CC4F (hypothetical protein n=1 Tax=Aestuariibacter sp. A3R04 TaxID=2841571 RepID=UPI001C09CC4F)

HSP 1 Score: 77.4 bits (189), Expect = 8.370e-15
Identity = 47/123 (38.21%), Postives = 67/123 (54.47%), Query Frame = 0 
Query:    1 MAVYTLQPGETRNIQTPSKFLSILELDGLLSVASSSYGLKPLRVKPGWQLELDGIPEVAIENVDAQAVTVELQDAGVRISGGGGGSVSITNKPVIKRIEEPLDFQANVTFNGGAVELISSNNL 123
            M + T+  G+ R IQTP+K+LS++  +G   V + + G   +  K G Q  LD I EV   N     + +E + A ++I G G GSVSI NKP I+RIEE +   A  T   G V   S ++L
Sbjct:    1 MPIVTIAAGKERVIQTPAKYLSVIGANGQFVVNAPALG--NVIGKIGRQYVLDNITEVLFINDSGDPIEIEYEIANIQIFGSGSGSVSIENKPTIRRIEEAIQVNAAATVENGTVTAQSHDSL 121
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100944.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI001C657F1A5.690e-2037.07hypothetical protein n=1 Tax=Shewanella sp. FJAT-5... [more]
UPI001C09CC4F8.370e-1538.21hypothetical protein n=1 Tax=Aestuariibacter sp. A... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100944contigL-digitata_M_contig100944:473..886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100944.1.1mRNA_L-digitata_M_contig100944.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig100944 473..886 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig100944.1.1 ID=prot_L-digitata_M_contig100944.1.1|Name=mRNA_L-digitata_M_contig100944.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=138bp
MAVYTLQPGETRNIQTPSKFLSILELDGLLSVASSSYGLKPLRVKPGWQL
ELDGIPEVAIENVDAQAVTVELQDAGVRISGGGGGSVSITNKPVIKRIEE
PLDFQANVTFNGGAVELISSNNLNTLADKVCAINAMTQ
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