|
|
Homology
BLAST of mRNA_L-digitata_M_contig1004.1.1 vs. uniprot
Match: D8LSH2_ECTSI (Lissencephaly protein 1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH2_ECTSI) HSP 1 Score: 104 bits (259), Expect = 1.730e-20 Identity = 58/92 (63.04%), Postives = 63/92 (68.48%), Query Frame = 1
Query: 232 RTDRGSPQLSSSSASRSANALLHA----------------FPIDPEMERTFRGRGAAVTGVSYSPDMKHLVSSAEDNCLMLWNFRAQLRALR 459
RTDR SPQLS++S SRS FP+DPE+ERTFRGRGAAVTGVSYSPDMK LVSSA DN LM+W FRAQLRALR
Sbjct: 2 RTDRSSPQLSTASTSRSTXXXXXXXXXXXXXXXXXXXXSIFPVDPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALR 93
BLAST of mRNA_L-digitata_M_contig1004.1.1 vs. uniprot
Match: A0A830HAU6_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HAU6_9CHLO) HSP 1 Score: 76.6 bits (187), Expect = 1.480e-11 Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 289 ALLHAFPIDPEMERTFRGRGAAVTGVSYSPDMKHLVSSAEDNCLMLWNFRAQLRALRF 462
++ A+P DP +ERTFRG AVT + ++P+MK L+S + DNCLM+WNF+ QLRA RF
Sbjct: 2 SMADAYPEDPSLERTFRGHKNAVTSLVFNPNMKQLISGSNDNCLMVWNFKPQLRAYRF 59
BLAST of mRNA_L-digitata_M_contig1004.1.1 vs. uniprot
Match: A0A7S2VWJ8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWJ8_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.370e-10 Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 1
Query: 313 DPEMERTFRGRGAAVTGVSYSPDMKHLVSSAEDNCLMLWNFRAQLRALRF 462
DP +ERTFRG ++V V++SP+MK LVS +EDNCLMLW+F+ QLRA RF
Sbjct: 10 DPTLERTFRGHKSSVLSVAFSPNMKQLVSGSEDNCLMLWSFKPQLRAFRF 59
BLAST of mRNA_L-digitata_M_contig1004.1.1 vs. uniprot
Match: L1J966_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J966_GUITC) HSP 1 Score: 68.9 bits (167), Expect = 2.330e-9 Identity = 28/53 (52.83%), Postives = 40/53 (75.47%), Query Frame = 1
Query: 304 FPIDPEMERTFRGRGAAVTGVSYSPDMKHLVSSAEDNCLMLWNFRAQLRALRF 462
F DP +ER+FRG A+ V ++P+MK L+S ++D+CLM+WNF+ QLRA RF
Sbjct: 2 FSEDPTLERSFRGHKDAINSVVFNPNMKQLISGSQDSCLMIWNFKPQLRAFRF 54
BLAST of mRNA_L-digitata_M_contig1004.1.1 vs. uniprot
Match: A0A3L6VRZ9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VRZ9_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 4.370e-9 Identity = 26/53 (49.06%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 304 FPIDPEMERTFRGRGAAVTGVSYSPDMKHLVSSAEDNCLMLWNFRAQLRALRF 462
FP+DP ++RTFRG + V +SY+P+M+ L S + D +M+WNF+ Q+RA RF
Sbjct: 32 FPMDPSLQRTFRGHKSGVECLSYNPNMRQLASGSLDCTVMIWNFKPQMRAFRF 84
BLAST of mRNA_L-digitata_M_contig1004.1.1 vs. uniprot
Match: A0A7I8VI73_9ANNE (DgyrCDS4148 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VI73_9ANNE) HSP 1 Score: 63.2 bits (152), Expect = 1.430e-8 Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query: 313 DPEMERTFRGRGAAVTGVSYSPDMKHLVSSAEDNCLMLWNFRAQLRALRF 462
DP +ER F+G VT V ++P+MK LVS D+C+M+WNF+ Q+RA RF
Sbjct: 6 DPSLERHFKGHRETVTSVDFNPNMKQLVSGGMDSCVMVWNFKPQMRAYRF 55
BLAST of mRNA_L-digitata_M_contig1004.1.1 vs. uniprot
Match: A0A699YXE3_HAELA (WD_REPEATS_REGION domain-containing protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YXE3_HAELA) HSP 1 Score: 64.7 bits (156), Expect = 1.500e-8 Identity = 28/52 (53.85%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 307 PIDPEMERTFRGRGAAVTGVSYSPDMKHLVSSAEDNCLMLWNFRAQLRALRF 462
P DP +ER+FRG AVT V ++ +MK L+S + D C+M+WNF+ QLRA RF
Sbjct: 3 PDDPTLERSFRGHKDAVTSVCFNNNMKQLISGSLDGCVMIWNFKPQLRAYRF 54
BLAST of mRNA_L-digitata_M_contig1004.1.1 vs. uniprot
Match: A0A383VQ96_TETOB (Uncharacterized protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VQ96_TETOB) HSP 1 Score: 67.4 bits (163), Expect = 1.720e-8 Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 1
Query: 301 AFPIDPEMERTFRGRGAAVTGVSYSPDMKHLVSSAEDNCLMLWNFRAQLRALRF 462
A P DP +ER+FRG AVT V+++ ++K L+S + DNC+M+WNF+ QLRA RF
Sbjct: 16 AQPDDPTLERSFRGHKDAVTSVAFNSNLKQLISGSLDNCVMVWNFKPQLRAFRF 69
BLAST of mRNA_L-digitata_M_contig1004.1.1 vs. uniprot
Match: A0A2G8LCQ3_STIJA (Putative POC1 centriolar protein-like A isoform X2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LCQ3_STIJA) HSP 1 Score: 67.0 bits (162), Expect = 2.020e-8 Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 289 ALLHAFPIDPEMERTFRGRGAAVTGVSYSPDMKHLVSSAEDNCLMLWNFRAQLRALRF 462
A P DP +ER ++G VT V ++P+MK L S D+CLM+WNF+AQ+RA RF
Sbjct: 35 AAFQLVPEDPTLERNYKGHRDTVTSVDFNPNMKQLASGGMDSCLMVWNFKAQMRAFRF 92
BLAST of mRNA_L-digitata_M_contig1004.1.1 vs. uniprot
Match: C1MRX9_MICPC (Entriole proteome WD40 repeat-containing protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MRX9_MICPC) HSP 1 Score: 65.9 bits (159), Expect = 5.220e-8 Identity = 28/50 (56.00%), Postives = 39/50 (78.00%), Query Frame = 1
Query: 313 DPEMERTFRGRGAAVTGVSYSPDMKHLVSSAEDNCLMLWNFRAQLRALRF 462
DP +ERTFRG AVT +++P+MK L++S+ DN LM+WNF+ Q+RA RF
Sbjct: 16 DPTLERTFRGHKDAVTCCAFNPNMKQLITSSNDNSLMIWNFKPQMRAYRF 65
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Seed ortholog | 2880.D8LSH2 |
| Preferred name | POC1A |
| PFAMs | WD40 |
| Model size | 1204 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K16482 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000226,GO:0000278,GO:0000922,GO:0001501,GO:0002062,GO:0002063,GO:0003413,GO:0003416,GO:0003417,GO:0003418,GO:0003431,GO:0003433,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005819,GO:0005856,GO:0005929,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007098,GO:0007275,GO:0007276,GO:0007283,GO:0008150,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010564,GO:0010638,GO:0010824,GO:0010825,GO:0015630,GO:0016043,GO:0019953,GO:0022402,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0031023,GO:0032501,GO:0032502,GO:0032504,GO:0032886,GO:0033043,GO:0035265,GO:0036064,GO:0040007,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045787,GO:0046605,GO:0046607,GO:0048232,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048589,GO:0048609,GO:0048705,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051216,GO:0051493,GO:0051495,GO:0051704,GO:0051726,GO:0060271,GO:0060348,GO:0060349,GO:0060350,GO:0060351,GO:0061448,GO:0065007,GO:0070507,GO:0070925,GO:0071840,GO:0090068,GO:0098868,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902850,GO:1903047,GO:1905515 |
| Exons | 7 |
| Evalue | 2.84e-21 |
| EggNOG OGs | 2CMZ3@1|root,2QSVJ@2759|Eukaryota |
| Description | growth plate cartilage chondrocyte development |
| Cds size | 1203 |
| COG category | S |
| BRITE | ko00000,ko03036 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682406606.7529979-CDS-L-digitata_M_contig1004:3233..3383 | 1682406606.7529979-CDS-L-digitata_M_contig1004:3233..3383 | Laminaria digitata LdigPH10_18mv male | CDS | L-digitata_M_contig1004 3234..3383 - |
| 1682406606.762672-CDS-L-digitata_M_contig1004:4076..4202 | 1682406606.762672-CDS-L-digitata_M_contig1004:4076..4202 | Laminaria digitata LdigPH10_18mv male | CDS | L-digitata_M_contig1004 4077..4202 - |
| 1682406606.771245-CDS-L-digitata_M_contig1004:5278..5453 | 1682406606.771245-CDS-L-digitata_M_contig1004:5278..5453 | Laminaria digitata LdigPH10_18mv male | CDS | L-digitata_M_contig1004 5279..5453 - |
| 1682406606.7797983-CDS-L-digitata_M_contig1004:5905..5982 | 1682406606.7797983-CDS-L-digitata_M_contig1004:5905..5982 | Laminaria digitata LdigPH10_18mv male | CDS | L-digitata_M_contig1004 5906..5982 - |
| 1682406606.788288-CDS-L-digitata_M_contig1004:6640..6865 | 1682406606.788288-CDS-L-digitata_M_contig1004:6640..6865 | Laminaria digitata LdigPH10_18mv male | CDS | L-digitata_M_contig1004 6641..6865 - |
| 1682406606.79696-CDS-L-digitata_M_contig1004:7640..7849 | 1682406606.79696-CDS-L-digitata_M_contig1004:7640..7849 | Laminaria digitata LdigPH10_18mv male | CDS | L-digitata_M_contig1004 7641..7849 - |
| 1682406606.8056624-CDS-L-digitata_M_contig1004:13084..13325 | 1682406606.8056624-CDS-L-digitata_M_contig1004:13084..13325 | Laminaria digitata LdigPH10_18mv male | CDS | L-digitata_M_contig1004 13085..13325 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig1004.1.1 >prot_L-digitata_M_contig1004.1.1 ID=prot_L-digitata_M_contig1004.1.1|Name=mRNA_L-digitata_M_contig1004.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=401bp
RLCKASQAFTTPALLCSTSSRNKQHSLESESYLRLKHNRLAMASRSSTAG
GRSGLNSTGSRLGRGTHRRLSGLDQTARTDRGSPQLSSSSASRSANALLH
AFPIDPEMERTFRGRGAAVTGVSYSPDMKHLVSSAEDNCLMLWNFRAQLR
ALRFKGHTATVHHAEFSPDGSLVASASRDRTVRLWSPSARGGSTVLKGHM
GGVRHASFSRNGRLLITASEDKTVKVWSLPSQKFVCTLTGHNNWVRCATF
SPDSRLATSCGDDKTVRLWDVQTQDCLHSFFDHDGSVGQARFHPDGTCLA
ACSTDRTIKVWDARSHQLLQHYPAHDGEVTSISFHESGNFLLSSSTDSSL
KVWDLREGRLVYTLKGHTGAVTTCAFSADGTRFASGGTDGVVMSWRSHLD
N back to topmRNA from alignment at L-digitata_M_contig1004:3234..13325- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-digitata_M_contig1004.1.1 ID=mRNA_L-digitata_M_contig1004.1.1|Name=mRNA_L-digitata_M_contig1004.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=10092bp|location=Sequence derived from alignment at L-digitata_M_contig1004:3234..13325- (Laminaria digitata LdigPH10_18mv male)
CGCTTATGTAAGGCTTCGCAAGCATTTACAACGCCTGCGTTGTTGTGCTC
GACAAGCAGCAGGAACAAGCAGCATTCCCTCGAGAGCGAGAGCTACCTTC
GCCTGAAGCATAACCGCCTAGCAATGGCGTCGAGATCTTCGACCGCTGGA
GGAAGAAGCGGTCTCAACAGCACCGGCAGTCGACTCGGGAGGGGCACCCA
TCGCCGTCTCTCTGGATTAGACCAAACCGCACGAACCGATCGTGAGTGTT
GTTGTGCTGAGAGGGGGGGGGGCTGGGAACACGGATAACCTCCGAGGGCT
CGGCTTGACCTAAGTATAGCAATCGTTCCTCGGCGGCACGCGCATGTGCA
TTCAGTTCGCTTTTGTCCGTAGTCTTGGTCAGACGCTTCTCTTTTTCGTT
GTGACGCCTCTCAATTCTCAGTCGACGTTGCCTGGAGCAAAAAATGTGGC
AGTTTGGTCATTCATTGTTCAAATATGCGAGCGTTGCTGTTTCTTTTTAT
TTTTTTGGCGAGTCTCGTAGTGCCCATGGCCCTAGCGCCCAACAACGTTG
ATCTCGGCCGGCACTCGAAGTAGCAAGCCACGCGGGAGCGATGGCGCAAT
CAGAGACGCCCTTGCTGGGTACTTGCACCTCAGTTATCGACTCGGAACCG
TTGGGATTTTTGTTTTACGTACTCTCCGCGCGCAAATGAATGCCACATCC
CACGCGTTGCAGGAGAGAGGAAATAATGGATGCGCTCGTATAATAACAGA
AATAGGACATACGAGTAGGGTAACGGATTGCGTGCTCATCACTGCTGCGT
TCCGCGGTTGCTTGCTCATCCGCTCACAGCGACAACGAGAGCACGAGGGC
GACGGTTTCTGGTGTTATACGACCGCATCATATAAACGGTACTGCAACTC
GGCACTCCAGCAGTACGTGCTGCTGCTGCTGCTGCTGTGCAGACGCAGAT
TGCTGTATTTGTGCAAGCTCGTGCAGACTGCACGTGCCAAGTTTAGGATT
TAGAATTTTGCGACCTTGGGAGGAGGACCCGGTGACCAAGATAATGAGAC
AGCAGTGCGTCTGTCAGCCGACGTGTGATCGCGCAGCAGTGCGAGTACTC
CGTAGTGTCAGACGGCGCGCGTGCTGTGTATAGAACTCTTTGCGCTGTGT
TGCGAAGATTGAATCACTGGGCTGATGAATACAGCATCCCCTGACCAAGC
AGCCCAGATTGATTCGTGTCGTCGTGTGGCCGACGTTGTAGACTGGTACT
TCGTACGAGTACTCACTCGTATCATACGAGTGATAAGTACGTCATCATCT
TTGGGTCACTTTTTGCCCTCTGGCCTCTGGATTCTGGATAGCAGTAAATA
GACCTATCATGAGTGTACTTTTACAAGGGTATGTTCGGTAGGGTACATAC
CAAAGTATACCGGGGGTGTTTGCTAGGTGAATACCTACCGAACCTTACTG
GAGTGTTCGGTACGGCCGCAAAACCCTACCGAACACTCCGGTAAGGTTCG
ATCCAAACTCCTTACCGGTACCCGAAACATCGGTAAGCCCACTCAAATGT
ACCCCGGGTACCGGTATACCCTCTACCACAACACCGGGGGTACGGATATT
TGCTCGGTACGGCCTCGATACCGGTGCCCGACATTGCGGTAACTTCGGTA
CGAACTCAATACCGGTACCCCGCACTTCGGTAAGTTCGGTACGCCCACTC
AAATGTACCCCGGGTACCGGTATACCCTCGACCACAATACCGGGGGTACC
GGTATTTGTTCGGTACGGGTTCGATACCGGTACCCGACACTTCGGTAAGG
TCGCTACGAAATCAACGCCGGTACCCGGCAAATCGGTAAGTTCGGTACGA
CATCAATACCATATCGGTACCCGAAACTTCGGTAAGTTCGGTACGCCCAC
CTAAAATACCCCGGGTACCGGTATACCCTACCGAACATACCCTTGCATTT
TGTATTATACCAGGTACAGCCGTCCCAGTGTGCAGTACGGTGGGGGTGGT
GCACGTCGATGGTCCCTATTCCGTGGGTAGGGTATGGTGTTCGGCACCAT
CCTTTCGATCTATTAATACTAGTATCATAGCGCGCAGCTACTGCTGTAGT
CTAGACTATTACCGCCGTACAAATGCCGGACCGTACCCGTGCGGTATTAT
GTCTAGTCCCTACGGATGGTGTCGAGGCGCGAGGGGCGACGATCCCACCG
AAAAGGAACCTACGTATATACCGGTAACCGGTGACCGGCAACCCTTTCGG
GACCGTATAGCTACATATCGTATTAATAGCTATAATACTAGCAGGTAGCG
ACAGGCACAACGAGGGGTGTGGTCATATCGTCCGTCTATAATTGTGTGAT
CGCACGGCAGTACGAGTAGTGCAGTAGTACTATCATGCTGCGCGCGTGTC
ATACATCTCCTTGCAGTGTAGCCCTGACACTGAAATCGGCATCCCCTAGG
CCAGCAGCCCCAGTTGCTCCGTGTGGCCGGTGCTGGAATCGTCATGTATT
TTGTATTTTTCATCATTATTCGACGCGTCGGACAGATCACGACGTTGATC
ATCAAGATCTCAACCTGCCGTTTTGAGTTGTTCAGGATCTGTATACAGCA
GTAGTACTGATCCAACCCAGGAATCCTGTTCTATTATCGATCGTGGAGAT
TATACGGCTCCCACCCGGCAACATGGGCTAGATCGTACAGATCAGGAAAT
AGATATGCCCTGAAAGATCTAGATCATTATGTGGGGATAGGTTGATCTGT
CCGATGTGCGCTGTATTCCCAGCAGTGTATATATTTTGCTTTGCTTCGTC
GTCTTCCTGTTCGTTTTTTCAGTTACAGTAGTTTCTTTTTGCTTCCCTGG
TGTTCTTGGTGGCGGAGTCTGTTTGTTTTGGTTCTTATCTCTGTTCTACA
CCCCTCGCGTTGCTTGCGAGCCTGCAATCTGCGTGTTATCTTATGTGTTT
CCTCTCTTGCTTTCTCGCTTGAATTTTTTCTCTCTTCCCTTTTTGATTTT
GATTTCGATTTCGATTTCGATTTCGACTTCGATTTCTCGACGTCGAGTTG
TTTTTCATCCTGTCTTTTCCTTGGGGTTATTATGCGGTCTTCTCGGTTTC
TGTGGCGATTTGTACAGCGTACCGCATGTATCTGATACATACGTGCGCGG
ACCTCACTTTTATTTTTGTCTGGGGTATACGATGTGCTTCAGTTAATATG
TGTATTATTCTTTGCCTTCTTTTTATTATTTCCCGAGGTATTCTTCCACT
CCAGAGTTATTGGAGCCTGTCGTGCGACCACGGACTGCTTTGTATTGTGG
CGATGAGTTAATGTGAGAACAACAACAACAACATATATCATGTACCAGGT
ATTCAAGATGCGTACAATCAGCCACTTTGTAAAAAGGCCACCTTGTACCC
ATCGGTATTTATGGTCATCGGTAATGGACCTTGGACATTTCGAGAATAGT
ACTCGTGGTGGAGAGGTTCGAGATGCAAGATTTTTGCCAGATATCAGATG
CGTATGATATCAGATGTCGGTTGTTAGCGTGTGCCGAGTTTGATAAAATG
ATGCTCGTGTGCAACAAAACAGCAGCAGTGTTGTTGTTGTTGTTGTTGTT
GTCATTTTTACTGTTGTTTCTCACAGTAACTCATCACCAGAATCCAGTCC
GAGGTCGCAAGACAGGCGCAAACATTAATCACCGTACAGCAGTACGTACG
TATCCCTTTAGCGCTTTTGGTTGCACATGTACATTCACATTCAACCACCG
CAATGGTGTTATCATTATACTGGTAAGCACCAACAATTAGTCCAAGCGGC
GGGGTGTGCCTCGATCGCGGCATCGCTACGTCTGGCCCCCGCTCTTCTTG
GCAGCTGAAGGTTGCCGGTTCAACTGTTAATACCAACATATGACTTCATG
TTTGGGCATTGAATCGAGCCATCGGCCACGACCATCGCCATACTTTTAAG
TTTTAGTCTTGGGGAGTAAAGCGACAACAGCAGCAGCAGCAGCAGCGGCG
GCGGCAGCAGCAGCAGCGAAATATGCCTTATCTCCAGAGCCTCAGCCACC
CCGGCAACAGGCGGACTTGAGCAGCAGCAGCAGCAGTCGGTTTAGTGTCC
GAATTTGTCCGCTGACTCCACAAAATATTCGCCTTAACTCCCGAGCCTCA
TCCAGCCCGGCAATAGGGGGACTTGAGCAGCAGCAGTAGCAGTCGGTATT
TTCTCCGAATTTTTCCTCCTACTCCACAGACTGTTCGCCTTAATTCACGA
GCCTCAGCCCGGCAGTAGGGGCACTTGAGCAGCAGCAGCAGCAGCAGTCG
GAATTTTGACCGAATTTGTCCGCCTACTCCACAGACTGTTTGCCTTAACC
CACGAGCCTCAGCCACCCTGGCAACAGGGGGACTTGAGCAGCAGCAGCAG
TCGTTATTTTGTCCGAATTAGTCCGTCTACTCCACAGATTTTTTTCCTTA
ACTCACGAGCCTCAGCCACCCACGGCATAGGAAAACTTCGAGTTGAAGGT
CATGTTAGTCGGCGCCTTCTTGGTTTGGGTTCCGATGACTCGGTACTCGA
GTACGGCGTACGGTACAGCAGGGTTTGGGTTCCGATGACTCGGTACTCGG
TGCGGTACGGTACAGCAGTAGGCACAGTACAAATTTGTTTCCCATGTCCT
GTCCGAGTATGACGCGAAGTACAAATTTGTTTCCCATGTCCTGTGCGTGC
GATGCGCTATGCTACGCTGCGCACAGGCCGGCCGGCAACTCAGCCACCGC
CCGTGGGTTGCTCTTTTCGTTGATTGTGCCCGCGCGAGGAAGAAAGGTAG
GAGTTGGACTTTGCCGCCTCAAGTCCCCAAGACTGCTGTAGTACTCATGT
GTTCGTGACGTCCGCACCCATCTTCGGACATGCGCGACAAGCCAAGCTTA
ACCCCTTTAGGCCTGAACTCCTCCCGTTTGGGGGACAACTGACTTGAAGA
TAGAGGCAGACATGTGTTTCCGCACAGTGCATTTCTAGAAGGTTTAATCC
TAGAAAACCCAGGGCCGCCGCCGAATCGAATGGTACTACATTATTTACTT
CAGTGGCGTGATTTTTGCGTGCTACTGCTGTGCCATACGAGTGGCAATAT
TTTTTTGCGACGGGGTCATTGCCTCGAAAAATGCCCCCCCCGTCTTGTTC
ACCGCCAGTTGTTCGTAGTCCCGCCCCGCGGCCCCCTCTTCCTTCCCCTT
CTTTGAGCGCAGATCGCAAGCGAAAAAACAGAAGAGAGAAGCGAAACGAA
ATAAATAAATAAACAAATAAAAGAGAGAAACGAGAAAGACAAAACTACTG
GGGCGAGTTACATACTATTAAATATGAGATGCCAGGTATAGCTACGAACG
CTGAAATACAAGCTCAAAACAAAATCGAACGCATCGTCTCCCATCGCGTC
GCACCGCATCGCATCTCATCGCATCACGTCTCATGGTGTGTGCGTCCCAT
CTCCCCGTCCAATGTTACCCTCGCAGGTGGTTCCCCGCAGCTCTCGTCCT
CCAGCGCGAGCCGGAGCGCCAACGCCTTGCTGCATGCCTTCCCGATCGAC
CCCGAGATGGAAAGGACTTTTCGAGGCAGAGGCGCGGCTGTCACCGGGGT
CTCGTACTCGCCAGACATGAAGCACCTCGTGTCCTCGGCGGAAGACAACT
GCCTCATGCTCTGGAATTTTCGGGCGCAGCTGCGGGTGAGTCCCCAGCGA
GGGGGTGGAGGTGGAGGCGGTGGCAGAGCAGGGACGGGGGGGGCGGGGGC
ATTGAAGGGTGTGGAGTGATAGGGTCTGAGGGGGTGTACTCATTATCATG
CATGACCGTAGTCGTATGACCATAGGCGATAGGGCCTGAGGGGGGGGGTT
ATTCTCTTTCGTGTTTTTTTGTTTTTCAACTTGACGTTGCACCAACTAAT
GGGAGAACGATCGGCCATTGCACCGTGCATAACTGCTGCAGTGCGCAGTT
TACCCCACCCCGCCCCCCATGCTCCGTCTCGTTGGGATGCGTGGTCAATG
GTCAAATGACCAAGGCAAGCAACAAATGAGTACCCCCCGCCCCCCCCAAT
GCCCCCCTCCGCGTGTCTTGCGCATTCTCGCCCCAGAATCGCCCACCCCC
CGCCGCGGCTGCTCGGCTGTAGCAGTCTTATGTAGAGCTACTTCTACTGC
TGAAAAACAGCACACCCAACCCCCCCCCGTCCCCCCGTCCCCCTCTCGTC
GTCGACCGCCTCCATCGCCACCACTACCGCCGACCCCACCACCCCTCCGT
CCTCACCAACCACTTGTACCGCCGCTGCTACCGCCCCCCGCCCCCCCATC
ATCAACCGCCTCCACCGCTGCTGCTGCTACCGCCGCCGCTGCCGCCACTG
CTGCCGCGTTTTTTGCAAACCGATTTTTTTAAAAATACATTTTCTGTTAA
AAAAACTCAAACCGTTTTTTTTGTCTTTTATGTTAAAACAAAAACTCGGT
CGGGCTAAAGGCGCTGAGGTTTAAGGGTCACACGGCGACCGTCCACCACG
CCGAGTTCTCCCCCGATGGTTCGCTTGTTGCGTCGGCGTCGCGGGATCGC
ACTGTTCGGCTGTGGTCGCCGTCGGCCAGGGGGGGCTCTACGGTCCTGAA
GGGGCACATGGGCGGGGTGCGGCACGCGTCGTTTTCGAGGAATGGGCGCC
TGTTGATCACGGCCTCGGAGGACAAGACTGTCAAGGTGAGCAGGAGGAGG
AGGAGGCGTTGTGGCGAAGCGGGTGGGTGGGTGCGGTGTGGTGTGGTGTT
GTGTGAGAGGAGGGGAGGGGAGGGGGGGGGGAGAGAAGGGGATAGGGAAG
CGGGGGGGGGGAGAGGAGAAAGATAGGAGGAGAGGAGAGGGGAGGGGGGT
GGGGGGGTTAAGGATTTGTGTTTCTCCTTGCTGGCTAGCTATGTGTACTT
GCTTGCTTCTGGTGTCGCCAGGCTTTCGCTCGGCGCTGTGTGGCGGTGCT
CGGTAGCGCTCACCTCGGGCTGGGCATCGCGGTTGCGATCGTTGTGTTTT
TTTGGCGTGGTGGTGGCGCTGGGGTGAACCCTTCTGTGGAACACACATTG
GAGGAAGTAGGTGGGGGGGGGGTGCGGGGGCGGGGTGTACCGCGTTTCTT
GCTTGCTTACTACTGTATTAGAATGGTACCTGGTAGTATGTATTCTGGTG
TTCAAAGTTTTAATAGTTGTAACTACTATTACCGACTTGTGCAACGCGTG
GGTATGCATGCGCGTTATCGTAGTGCACCGGTTGTTGTCCTCTCTATGGG
TGATGATACTGACGCCGTAGCTCACCCGCTCCCCCCCCGCCGCCCCCCCT
GAATGCCTTTGACTGCGAAACCCGAAACGCCTCTTTGTTGCAGGTGTGGT
CGCTCCCCTCCCAGAAGTTCGTTTGCACCTTGACGGGGCACAACAACTGG
GTACGCTGCGCTACGTTTAGGTGTGTGTCTGCGGGGAGATGGGAGGAGGA
GGACGAGGGGGGATTCCAGGCTCGTCTTGTGTGTTTGTGTGTTTGTGCTT
AACGTTTTTCGGCGGTCGGCTTACCGGGCCCGAGCGTTTGGAAACAGTAA
AAAATGAACAAGACGGATGAAATGCCGGGCACTCTCCGGCGAAAAAGTAT
CGGTCCGCAAACCCCCTTTGTTTTCTGCAGAACCAAACAGTAGTGAGCGC
ATGCCAAGTACAGTACTGCAATTAGTCGTATTGACTATTAATATAACTTT
TGCAAGGGTACGGCAGTACTCGTACGACGTTTTTTGTTGCCGACGCTCAC
CGACAACCCGCCCTGCCTAATTCCAGTGCCTGTCCCCCCCCCCTCCCCCT
ACCCCCCTATGCGAACCCGCCCGCCCACTTTCCACAAACTCCTCGGGTGT
ACGTACTCGCGTCCGCACGCAGCCCCGACTCTCGGCTGGCAACCTCTTGC
GGAGATGACAAGACGGTGCGGCTTTGGGACGTGCAGACCCAGGATTGCCT
CCACTCGTTCTTCGACCACGATGGGTCGGTGGGGCAGGCGCGGTTCCACC
CGGACGGGACTTGCCTGGCGGCCTGCTCGACGGACCGAACGATCAAGGTC
AGTGCTAGTGTCACTGGGAAAAAGGCTGTAGCAAAGGCGTTGGTAATGAT
ATTACGGGAGAACACACTCACCAGGACAAAAATCGAGCAATAAACATAGG
GAAAATTACCTTTTTTGGTGTCCATACGTTGTGGGTCCTGATTGCCATGG
TCCCCCGCAATAGTATTATTAGAGCAATGTCGATGTTTTTTATGGAGTCG
TGAGTTTTTTTTAATGCATTGTAGGTGTCTTTTGATGGAGTCTTACGTAT
GTCTTTTGGGTTTTGGCGGTGTCTTTTTTTTATGGGGACGCTTACTCTTT
TGGGTCTTGTCGGAGTTTTTTTATGGAGTCGTAGTCTTTTTGAGTTTTTT
GGGGTTTTGCCGATGTCTTGTGATGGAGCCATGAGTCTTTTGAGTCTTGT
CGATGTCTGCTGATGGAGTCTTGCATCTTTTGAGTCTTGTCGATATTTTT
TTATGGAGTCGTGAGTCTACTGAGCCTTGAGTGTCGAGCCTTGAGTCTTG
AGTATCGCATTTTGAGCCTTGAATTTCGGGTCTTGCGTCGTCAGTCGGAA
CCATGTCCCCGCTTCCCCCTCCCCTCGCCCCTCTCGGGTTTCCATGAGGT
GGTGGTTCCGATCGGCTGGGGTTGTTGCGCAGAGGCCTCCTTGCGTACGC
CGGGCCGGGCCTATTCTGACCCCTCGTCTGGTCTCGTATTTTCTGAAAAT
AAGTCTTGTCTCGTAATTTCTGGCAACAAGTCTCCTCTCGCATTTAGTGA
AAACAGGCCTCGTCTCGTATTTGCTGACAACTAATCTCGTCTCGTATTTT
CCTGCAACAAGTCTCTGCTCGCCATTGATGACAACAAGTCTCGTCTCGTA
TATGTTTGCTGACATCAAGTCTCGCCTCGTCATTTCCAGTATTTTTGTGC
TTGCCATCCGACAATGTGCAGCATGAGCTTCAACGTTGATCACTCATGAC
ATTCCCGAAAGAAGAAGAATACCGCAGAAACAAAAGGAAACCTATGCGCA
AAGTCTAACTCCCTTCTATGCCTACTTCCGGCTTAAGCTTTATCTTTCTT
TTCGTTGTTTGGTCGGTATATAGGTCTGGGACGCCAGGTCTCACCAACTG
CTCCAGCACTACCCCGCCCACGACGGCGAGGTGACTTCCATAAGCTTCCA
CGAGTCCGGAAATTTCCTGCTCTCGTCTTCTACGGACTCCAGCCTTAAGG
TGCGACGGGGGGGGGGGGCTAGCTGCCTTGACAGCAAAGATAAGATGCTA
CAGGAGACCGGTCTTTTGGGGGGCGTCAAGGCCTCTTTATGCCGGAATAT
GCTAGTTTTTGTGTAGCGGGCGGTCAGCCAAGTGGTCAAACCGCGGTCTT
CTAGCATCTTTGTTTGACAGGAGGGGTTGGGTAGCCGATATGGTGGTGGT
GGCGGCGGCGGTGATGATATTAAAGAGAGCGTTGCCGAACGAATGGGGAC
GGCTTTGCTCTTCCCTTTGCCCGTTCAGGACTCGAACTCGGACACCACAA
CCAATACCCTGTCAAAACTTGATATCAAGTTCACGGCTCTGCTCTTCCCT
TTGCCCGTTCAGGACTCGAACTCGGACACCACAACCAATACTCTATCAAA
CCTTGATATCAAGTCCAAAAATCATACACGCTCAAGCTCAACCCAGCTTA
ACCCTTTTATCTCTGAACAAATGACGCTACGCTAATTTCGAGCAGTTTGT
CCCCAAGAGCGTGAGTGCAGTTCTAAACTCAAAAATCGAACTCAAACGCA
ATCTCAAACGTAAACTCAACCCAACTCACACGCAAACTCAACTCAATCAA
ACCCAACCCAACCCAACCCAACCCAACCCAACCCAACCCAACCCAACCCA
ACCCAACCCAACGCTGGCGTCGCGCACGCGCACGCGCTCCAGGTGTGGGA
TCTGCGCGAAGGGCGGCTGGTGTACACCCTGAAGGGACACACAGGCGCGG
TCACCACCTGCGCTTTCAGCGCCGACGGCACCCGCTTCGCCTCGGGAGGG
ACCGACGGGGTGGTGATGTCGTGGAGGAGCCACCTCGACAAC back to topCoding sequence (CDS) from alignment at L-digitata_M_contig1004:3234..13325- >mRNA_L-digitata_M_contig1004.1.1 ID=mRNA_L-digitata_M_contig1004.1.1|Name=mRNA_L-digitata_M_contig1004.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=1203bp|location=Sequence derived from alignment at L-digitata_M_contig1004:3234..13325- (Laminaria digitata LdigPH10_18mv male)
CGCTTATGTAAGGCTTCGCAAGCATTTACAACGCCTGCGTTGTTGTGCTC
GACAAGCAGCAGGAACAAGCAGCATTCCCTCGAGAGCGAGAGCTACCTTC
GCCTGAAGCATAACCGCCTAGCAATGGCGTCGAGATCTTCGACCGCTGGA
GGAAGAAGCGGTCTCAACAGCACCGGCAGTCGACTCGGGAGGGGCACCCA
TCGCCGTCTCTCTGGATTAGACCAAACCGCACGAACCGATCGTGGTTCCC
CGCAGCTCTCGTCCTCCAGCGCGAGCCGGAGCGCCAACGCCTTGCTGCAT
GCCTTCCCGATCGACCCCGAGATGGAAAGGACTTTTCGAGGCAGAGGCGC
GGCTGTCACCGGGGTCTCGTACTCGCCAGACATGAAGCACCTCGTGTCCT
CGGCGGAAGACAACTGCCTCATGCTCTGGAATTTTCGGGCGCAGCTGCGG
GCGCTGAGGTTTAAGGGTCACACGGCGACCGTCCACCACGCCGAGTTCTC
CCCCGATGGTTCGCTTGTTGCGTCGGCGTCGCGGGATCGCACTGTTCGGC
TGTGGTCGCCGTCGGCCAGGGGGGGCTCTACGGTCCTGAAGGGGCACATG
GGCGGGGTGCGGCACGCGTCGTTTTCGAGGAATGGGCGCCTGTTGATCAC
GGCCTCGGAGGACAAGACTGTCAAGGTGTGGTCGCTCCCCTCCCAGAAGT
TCGTTTGCACCTTGACGGGGCACAACAACTGGGTACGCTGCGCTACGTTT
AGCCCCGACTCTCGGCTGGCAACCTCTTGCGGAGATGACAAGACGGTGCG
GCTTTGGGACGTGCAGACCCAGGATTGCCTCCACTCGTTCTTCGACCACG
ATGGGTCGGTGGGGCAGGCGCGGTTCCACCCGGACGGGACTTGCCTGGCG
GCCTGCTCGACGGACCGAACGATCAAGGTCTGGGACGCCAGGTCTCACCA
ACTGCTCCAGCACTACCCCGCCCACGACGGCGAGGTGACTTCCATAAGCT
TCCACGAGTCCGGAAATTTCCTGCTCTCGTCTTCTACGGACTCCAGCCTT
AAGGTGTGGGATCTGCGCGAAGGGCGGCTGGTGTACACCCTGAAGGGACA
CACAGGCGCGGTCACCACCTGCGCTTTCAGCGCCGACGGCACCCGCTTCG
CCTCGGGAGGGACCGACGGGGTGGTGATGTCGTGGAGGAGCCACCTCGAC
AAC back to top
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