prot_L-digitata_M_contig100327.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig100327.1.1
Unique Nameprot_L-digitata_M_contig100327.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length52
Homology
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BLAST of mRNA_L-digitata_M_contig100327.1.1 vs. uniprot
Match: A0A6H5LR46_9PHAE (Sec15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LR46_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 1.550e-16
Identity = 38/45 (84.44%), Postives = 42/45 (93.33%), Query Frame = 0 
Query:    1 ALKDFEAKKSSEISRVCHRHYSEFIDSVEDLMKMKVDMISLRDQV 45
            ALK+FEAKK SEISRVCHRHYSEFIDSVEDLMKMK +M+ L+DQV
Sbjct:   70 ALKEFEAKKGSEISRVCHRHYSEFIDSVEDLMKMKAEMVGLKDQV 114
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100327.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LR46_9PHAE1.550e-1684.44Sec15 domain-containing protein n=2 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100327contigL-digitata_M_contig100327:106..261 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100327.1.1mRNA_L-digitata_M_contig100327.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig100327 106..261 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig100327.1.1 ID=prot_L-digitata_M_contig100327.1.1|Name=mRNA_L-digitata_M_contig100327.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=52bp
ALKDFEAKKSSEISRVCHRHYSEFIDSVEDLMKMKVDMISLRDQVRVNGV
SD
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