prot_L-digitata_M_contig102305.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig102305.1.1
Unique Nameprot_L-digitata_M_contig102305.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length44
Homology
BLAST of mRNA_L-digitata_M_contig102305.1.1 vs. uniprot
Match: D7FQK3_ECTSI (Argonaute 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQK3_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 8.950e-18
Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 MVKNLLISFFRVNNAKPARIIFFRDGVSEGQFREVLRYEVRML 43
            MVKNLLISF+RVNNAKPARIIFFRDGVSEGQFREVLRYEVR +
Sbjct:  751 MVKNLLISFYRVNNAKPARIIFFRDGVSEGQFREVLRYEVRAI 793          
BLAST of mRNA_L-digitata_M_contig102305.1.1 vs. uniprot
Match: A0A2S1PRW8_FUCSE (Putative argonaute n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRW8_FUCSE)

HSP 1 Score: 80.1 bits (196), Expect = 2.020e-16
Identity = 37/43 (86.05%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 MVKNLLISFFRVNNAKPARIIFFRDGVSEGQFREVLRYEVRML 43
            MVKNLLISF+RVNN+KP+RIIFFRDGVSEGQFREVLR+EVR +
Sbjct:  760 MVKNLLISFYRVNNSKPSRIIFFRDGVSEGQFREVLRFEVRAI 802          
BLAST of mRNA_L-digitata_M_contig102305.1.1 vs. uniprot
Match: A0A7J7KEB9_BUGNE (AGO1 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KEB9_BUGNE)

HSP 1 Score: 65.9 bits (159), Expect = 2.090e-11
Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    1 MVKNLLISFFRVNNAKPARIIFFRDGVSEGQFREVLRYEVRML 43
            MVKNLLISF+R    KP RIIF+RDGVSEGQF +VL YE+R +
Sbjct:  693 MVKNLLISFYRATGYKPTRIIFYRDGVSEGQFSQVLSYELRAI 735          
BLAST of mRNA_L-digitata_M_contig102305.1.1 vs. uniprot
Match: A0A2T9YYV5_9FUNG (Uncharacterized protein n=2 Tax=Harpellales TaxID=61421 RepID=A0A2T9YYV5_9FUNG)

HSP 1 Score: 64.3 bits (155), Expect = 7.310e-11
Identity = 27/44 (61.36%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 MVKNLLISFFRVNNAKPARIIFFRDGVSEGQFREVLRYEVRMLH 44
            +V+  L+SF++ NNAKPARI+F+RDGVSEGQF EV+  EV+ +H
Sbjct:  657 IVREQLVSFYQANNAKPARIVFYRDGVSEGQFAEVMATEVQAIH 700          
BLAST of mRNA_L-digitata_M_contig102305.1.1 vs. uniprot
Match: A0A072UVR4_MEDTR (Eukaryotic translation initiation factor 2c n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A072UVR4_MEDTR)

HSP 1 Score: 61.6 bits (148), Expect = 6.520e-10
Identity = 26/40 (65.00%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 MVKNLLISFFRVNNAKPARIIFFRDGVSEGQFREVLRYEV 40
            M++ LL++F+R N +KPARIIF+RDGVSEGQF +VL YE+
Sbjct:  762 MIRELLLAFYRKNGSKPARIIFYRDGVSEGQFSQVLLYEM 801          
BLAST of mRNA_L-digitata_M_contig102305.1.1 vs. uniprot
Match: A0A0S7GEJ3_9TELE (AGO4 n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7GEJ3_9TELE)

HSP 1 Score: 58.5 bits (140), Expect = 9.490e-10
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    1 MVKNLLISFFRVNNAKPARIIFFRDGVSEGQFREVLRYEV 40
            MV+ LLI F++    KP RIIF+RDGVSEGQFR+VL YE+
Sbjct:   38 MVRELLIQFYKSTRYKPTRIIFYRDGVSEGQFRQVLYYEL 77          
BLAST of mRNA_L-digitata_M_contig102305.1.1 vs. uniprot
Match: A0A8J5WUU6_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WUU6_ZIZPA)

HSP 1 Score: 60.8 bits (146), Expect = 1.220e-9
Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    1 MVKNLLISFFRVNNAKPARIIFFRDGVSEGQFREVLRYEV 40
            M++ LL+SF+R    KP+RIIF+RDGVSEGQF +VL YE+
Sbjct:  800 MIRELLVSFYRATGCKPSRIIFYRDGVSEGQFSQVLLYEI 839          
BLAST of mRNA_L-digitata_M_contig102305.1.1 vs. uniprot
Match: A0A7D4WAS9_PINFU (Argonaute-1 n=1 Tax=Pinctada fucata TaxID=50426 RepID=A0A7D4WAS9_PINFU)

HSP 1 Score: 60.8 bits (146), Expect = 1.220e-9
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 MVKNLLISFFRVNNAKPARIIFFRDGVSEGQFREVLRYEVR 41
            MV+ LLISF++V   KP RII +RDGVSEGQF++VL YE+R
Sbjct:  679 MVRELLISFYKVTRFKPTRIIMYRDGVSEGQFQQVLSYELR 719          
BLAST of mRNA_L-digitata_M_contig102305.1.1 vs. uniprot
Match: T1FY40_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FY40_HELRO)

HSP 1 Score: 60.8 bits (146), Expect = 1.220e-9
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    1 MVKNLLISFFRVNNAKPARIIFFRDGVSEGQFREVLRYEVRML 43
            MVK LLI F+R  + KP RIIF+RDGVSEGQF  VL YE+R +
Sbjct:  633 MVKELLIQFYRSTHFKPTRIIFYRDGVSEGQFAHVLSYELRAI 675          
BLAST of mRNA_L-digitata_M_contig102305.1.1 vs. uniprot
Match: UPI000F54E01C (protein argonaute-2-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F54E01C)

HSP 1 Score: 58.5 bits (140), Expect = 1.410e-9
Identity = 26/43 (60.47%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    1 MVKNLLISFFRVNNAKPARIIFFRDGVSEGQFREVLRYEVRML 43
            MV+ LLI F+R    KP RIIF+RDGVSEGQFR+VL +E++ +
Sbjct:   28 MVRELLIQFYRSTRHKPVRIIFYRDGVSEGQFRQVLCHELKAI 70          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102305.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQK3_ECTSI8.950e-1893.02Argonaute 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A2S1PRW8_FUCSE2.020e-1686.05Putative argonaute n=1 Tax=Fucus serratus TaxID=87... [more]
A0A7J7KEB9_BUGNE2.090e-1169.77AGO1 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A... [more]
A0A2T9YYV5_9FUNG7.310e-1161.36Uncharacterized protein n=2 Tax=Harpellales TaxID=... [more]
A0A072UVR4_MEDTR6.520e-1065.00Eukaryotic translation initiation factor 2c n=1 Ta... [more]
A0A0S7GEJ3_9TELE9.490e-1065.00AGO4 n=1 Tax=Poeciliopsis prolifica TaxID=188132 R... [more]
A0A8J5WUU6_ZIZPA1.220e-962.50Uncharacterized protein n=1 Tax=Zizania palustris ... [more]
A0A7D4WAS9_PINFU1.220e-965.85Argonaute-1 n=1 Tax=Pinctada fucata TaxID=50426 Re... [more]
T1FY40_HELRO1.220e-965.12Uncharacterized protein n=1 Tax=Helobdella robusta... [more]
UPI000F54E01C1.410e-960.47protein argonaute-2-like n=1 Tax=Pocillopora damic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..44
e-value: 6.8E-14
score: 53.7
IPR003165Piwi domainPFAMPF02171Piwicoord: 1..43
e-value: 1.4E-12
score: 47.4
IPR003165Piwi domainPROSITEPS50822PIWIcoord: 1..44
score: 11.675702
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig102305contigL-digitata_M_contig102305:618..749 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig102305.1.1mRNA_L-digitata_M_contig102305.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig102305 591..749 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig102305.1.1 ID=prot_L-digitata_M_contig102305.1.1|Name=mRNA_L-digitata_M_contig102305.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=44bp
MVKNLLISFFRVNNAKPARIIFFRDGVSEGQFREVLRYEVRMLH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR003165Piwi
IPR012337RNaseH-like_sf