mRNA_L-digitata_M_contig10227.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-digitata_M_contig10227.1.1
Unique Name	mRNA_L-digitata_M_contig10227.1.1
Type	mRNA
Organism	Laminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))

Homology

[Close]

BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: D7FY49_ECTSI (Similar to collagen, partial n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY49_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 5.700e-27
Identity = 73/147 (49.66%), Postives = 92/147 (62.59%), Query Frame = 1

Query:   19 ADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFT--VPIGSTGGG--SISGNTVTFSAADLEGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVV 447
            ADAAR  G  ++AVGVG G  +  LL IG  EANVF V+ F  LD ALDDI+S+ GG+ VPC +TGATVT++F   V   +  GG  +  G  V F+  DLE   T F+V L+ CG   G  V+ S  Y+DD+GNTPDLS + G  V
Sbjct:  190 ADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEELDLALDDIVSTSGGS-VPCAATGATVTVQFNGMVTEATVDGGVATYDGGDVVFTVDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSALEGEAV 335

[Close]

BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: D7FHN6_ECTSI (Glycin-rich protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN6_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 1.270e-25
Identity = 73/147 (49.66%), Postives = 92/147 (62.59%), Query Frame = 1

Query:   19 ADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFT--VPIGSTGGG--SISGNTVTFSAADLEGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVV 447
            ADAAR  G  ++AVGVG G  +  LL IG  EANVF V+ F  LD ALDDI+S+ GG+ VPC +TGATVT++F   V   +  GG  +  G  V F+  DLE   T F+V L+ CG   G  V+ S  Y+DD+GNTPDLS + G  V
Sbjct:  197 ADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEELDLALDDIVSASGGS-VPCAATGATVTVQFNGMVTEATVDGGVATYDGGDVVFTIDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSALEGWAV 342

[Close]

BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: A0A6H5JRK3_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK3_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 2.360e-25
Identity = 72/147 (48.98%), Postives = 92/147 (62.59%), Query Frame = 1

Query:   19 ADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFT--VPIGSTGGG--SISGNTVTFSAADLEGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVV 447
            ADAAR  G  ++AVGVG G  +  LL IG  EANVF V+ F  LD AL+DI+S+ GG+ VPC +TGATVT++F   V   +  GG  +  G  V F+  DLE   T F+V L+ CG   G  V+ S  Y+DD+GNTPDLS + G  V
Sbjct:  207 ADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEELDLALEDIVSASGGS-VPCAATGATVTVQFNGMVTEATVDGGVATYDGGDVVFTVDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSALEGWAV 352

[Close]

BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: D8LLU2_ECTSI (Similar to integrin alpha Hr1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU2_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 8.600e-24
Identity = 71/152 (46.71%), Postives = 89/152 (58.55%), Query Frame = 1

Query:   13 AAADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFTVPIGSTGGGSISGNTVTFSAADL-------EGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVV 447
            A ADAARD G  V+AVGVG G  +  LL IG  EANVF V+ F  LD AL  ILS+ G + VPC +TGATVT+EF    G   G ++ G + T+            E   T F+V L+ CG   GG ++ S  Y+DD+GNTPDLS + G  V
Sbjct:  175 AEADAARDEGTIVYAVGVGTGPTQEILLDIGGEEANVFDVDGFDELDVALAGILSASGSS-VPCAATGATVTVEFN---GMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYADDEGNTPDLSSLEGSAV 322

[Close]

BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: D7G513_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G513_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 3.690e-21
Identity = 69/172 (40.12%), Postives = 95/172 (55.23%), Query Frame = 1

Query:   19 ADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFTVPIGSTGGG---------SISGNTVTFSAADLEGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLS--QIAGLVVGNDICESP-----TPTPT 486
            ADAARD G  V+AVGVG  + EA LL IG    NVF    F  LD  LD+I+S+   + +PC +T A +++EF   + +  GG         S  GN V F   +LE   T F+VVL+ CG   GG++V    Y D++ N PDL+  ++AG+V   D   +P     TP+PT
Sbjct:  189 ADAARDEGTIVYAVGVGPDVSEATLLSIGGDLTNVFDASNFTELDNTLDEIVSTSVDS-IPCAATDAVISVEFNAMVTAASGGEGGSVPASVSEGGNVVVFEVPNLEATPTSFEVVLDTCGETEGGAIVADVSYVDEEDNEPDLTSIEVAGVVPTCDGAATPPPVAVTPSPT 359

[Close]

BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 8.150e-19
Identity = 63/150 (42.00%), Postives = 84/150 (56.00%), Query Frame = 1

Query:   19 ADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFTVPIGSTGGGSISGNTVTFSAADL-------EGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVV 447
            ADAAR  G  V+AVGVG G  E+ LL I   ++N F V++F  LD  L     S  G++VPC +TGATVT+EF    G   G ++ G + T+            E   T F+V L+ CG   GG ++ S  Y+DD+GNTPDLS + G  V
Sbjct:  177 ADAARAEGTIVYAVGVGSGPTESVLLDIAGDDSNKFSVDDFDELDGIL-----SASGSSVPCAATGATVTVEFN---GMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYTDDEGNTPDLSSLEGSAV 318

[Close]

BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: A0A8C4S0J0_ERPCA (WSC domain containing 1 n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4S0J0_ERPCA)

HSP 1 Score: 81.6 bits (200), Expect = 4.630e-13
Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = 1

Query:  790 TYLGCYVDEAQNRALKGPMTSS-PDMTPQMCAEYCDSSDYEYFGTAYATDCHCGD--TQPESREGVCDYECSGDNYKACGGVGTMSVYKSDNYGGH*EHPWLRR 1092
            TY+GC+VD+A++RALKG +      MT  MC + C  S Y + G  Y  +C+CG+  T    R+  C+ +C G+    CGGVG +S+YK +N      HP  R+
Sbjct:  140 TYVGCFVDDAKSRALKGTVFYDFRKMTSSMCRDTCSESGYLFAGLEYGAECYCGNRITATRVRQEDCNLDCKGEKGTICGGVGRLSIYKVENL-----HPGSRK 238

[Close]

BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: A0A6P3VXX5_CLUHA (WSC domain-containing protein 1 n=2 Tax=Clupeidae TaxID=55118 RepID=A0A6P3VXX5_CLUHA)

HSP 1 Score: 80.9 bits (198), Expect = 8.270e-13
Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = 1

Query:  775 APKHSTYLGCYVDEAQNRALKGPMTSS-PDMTPQMCAEYCDSSDYEYFGTAYATDCHCGD--TQPESREGVCDYECSGDNYKACGGVGTMSVYK 1047
            AP   TY+GC++D+A++RALKG +      MT  +C + C  S Y++ G  Y ++C+CG+    P  RE  C+ +C G+    CGGV  +++YK
Sbjct:  138 APHKGTYIGCFLDDAKDRALKGTVFYDFRRMTTSLCQDTCSESGYQFAGLEYGSECYCGNRIAGPRMREEECNLDCKGEKGSICGGVARLAIYK 231

[Close]

BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: A0A3B3SBR9_9TELE (WSC domain containing 1 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SBR9_9TELE)

HSP 1 Score: 80.5 bits (197), Expect = 1.090e-12
Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 1

Query:  790 TYLGCYVDEAQNRALKGPMTSS-PDMTPQMCAEYCDSSDYEYFGTAYATDCHCGDTQPESR--EGVCDYECSGDNYKACGGVGTMSVYK 1047
            TY+GC++D+A+ RALKG +      MT  MC + C  S Y++ G  Y ++C+CG+    SR  E  C+ +C G+    CGGVG +SVYK
Sbjct:  132 TYIGCFLDDAKGRALKGAVFYDFRKMTSTMCQDTCSESGYQFAGLEYGSECYCGNRVGSSRVREEDCNLDCKGERGSPCGGVGRLSVYK 220

[Close]

BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: UPI0015601E89 (WSC domain-containing protein 1-like n=3 Tax=Acipenseroidei TaxID=186622 RepID=UPI0015601E89)

HSP 1 Score: 79.0 bits (193), Expect = 3.560e-12
Identity = 35/92 (38.04%), Postives = 57/92 (61.96%), Query Frame = 1

Query:  790 TYLGCYVDEAQNRALKGPMTSS-PDMTPQMCAEYCDSSDYEYFGTAYATDCHCGD--TQPESREGVCDYECSGDNYKACGGVGTMSVYKSDN 1056
            TY+GC++D+++ RALKG +      MT  +C + C  S Y + G  Y  +C+CG+    P++RE  C+ +C G+    CGGVG +SV+K ++
Sbjct:  145 TYIGCFLDDSKERALKGTVFYDFRKMTSSLCQDTCSESGYLFAGLEYGAECYCGNRIAAPKTREEDCNLDCKGEKGSVCGGVGRLSVFKVED 236

The following BLAST results are available for this feature:

BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot

BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FY49_ECTSI	5.700e-27	49.66	Similar to collagen, partial n=2 Tax=Ectocarpus si...	[more]
D7FHN6_ECTSI	1.270e-25	49.66	Glycin-rich protein n=1 Tax=Ectocarpus siliculosus...	[more]
A0A6H5JRK3_9PHAE	2.360e-25	48.98	VWFA domain-containing protein n=1 Tax=Ectocarpus ...	[more]
D8LLU2_ECTSI	8.600e-24	46.71	Similar to integrin alpha Hr1-like n=1 Tax=Ectocar...	[more]
D7G513_ECTSI	3.690e-21	40.12	VWFA domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A6H5JNZ2_9PHAE	8.150e-19	42.00	VWFA domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A8C4S0J0_ERPCA	4.630e-13	39.42	WSC domain containing 1 n=2 Tax=Polypteridae TaxID...	[more]
A0A6P3VXX5_CLUHA	8.270e-13	38.30	WSC domain-containing protein 1 n=2 Tax=Clupeidae ...	[more]
A0A3B3SBR9_9TELE	1.090e-12	42.70	WSC domain containing 1 n=2 Tax=Paramormyrops king...	[more]
UPI0015601E89	3.560e-12	38.04	WSC domain-containing protein 1-like n=3 Tax=Acipe...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-digitata_M_contig10227	contig	L-digitata_M_contig10227:1217..6439 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	0
Seed ortholog	2880.D7FHN6
PFAMs	Collagen
Model size	1205
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K19720
KEGG Pathway	ko04611,ko04926,ko04933,ko04974,ko05146,map04611,map04926,map04933,map04974,map05146
Hectar predicted targeting category	other localisation
Exons	5
Evalue	8.56e-27
EggNOG OGs	KOG3544@1\|root,KOG3544@2759\|Eukaryota
Description	structural constituent of cuticle
Cds size	1071
COG category	D
BRITE	ko00000,ko00001,ko00536

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-digitata_M_contig10227.1.1	prot_L-digitata_M_contig10227.1.1	Laminaria digitata LdigPH10_18mv male	polypeptide	L-digitata_M_contig10227 1217..6307 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682406627.8415885-CDS-L-digitata_M_contig10227:1216..1283	1682406627.8415885-CDS-L-digitata_M_contig10227:1216..1283	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10227 1217..1283 +
1682406627.8538814-CDS-L-digitata_M_contig10227:2674..2761	1682406627.8538814-CDS-L-digitata_M_contig10227:2674..2761	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10227 2675..2761 +
1682406627.8639913-CDS-L-digitata_M_contig10227:3401..4120	1682406627.8639913-CDS-L-digitata_M_contig10227:3401..4120	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10227 3402..4120 +
1682406627.8723297-CDS-L-digitata_M_contig10227:5149..5210	1682406627.8723297-CDS-L-digitata_M_contig10227:5149..5210	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10227 5150..5210 +
1682406627.879781-CDS-L-digitata_M_contig10227:6170..6307	1682406627.879781-CDS-L-digitata_M_contig10227:6170..6307	Laminaria digitata LdigPH10_18mv male	CDS	L-digitata_M_contig10227 6171..6307 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682406627.8871558-UTR-L-digitata_M_contig10227:6307..6439	1682406627.8871558-UTR-L-digitata_M_contig10227:6307..6439	Laminaria digitata LdigPH10_18mv male	UTR	L-digitata_M_contig10227 6308..6439 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-digitata_M_contig10227:1217..6439+
coding sequence from alignment at L-digitata_M_contig10227:1217..6439+

protein sequence of mRNA_L-digitata_M_contig10227.1.1

>prot_L-digitata_M_contig10227.1.1 ID=prot_L-digitata_M_contig10227.1.1|Name=mRNA_L-digitata_M_contig10227.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=357bp
TATTAAADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALL
DAALDDILSSDGGTTVPCPSTGATVTIEFTVPIGSTGGGSISGNTVTFSA
ADLEGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVVG
NDICESPTPTPTKMSVVPTPHPTTVSHVPTPHPTTVSHVPTPHPTMVSHV
PTPHPTMVSHVPTPHPTKLSVEPTPYPTKMEPEPTPCPDDQKHPKGHPKR
GEHLDKCGAPKHSTYLGCYVDEAQNRALKGPMTSSPDMTPQMCAEYCDSS
DYEYFGTAYATDCHCGDTQPESREGVCDYECSGDNYKACGGVGTMSVYKS
DNYGGH*

mRNA from alignment at L-digitata_M_contig10227:1217..6439+

Legend: polypeptideCDSUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-digitata_M_contig10227.1.1 ID=mRNA_L-digitata_M_contig10227.1.1|Name=mRNA_L-digitata_M_contig10227.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=5223bp|location=Sequence derived from alignment at L-digitata_M_contig10227:1217..6439+ (Laminaria digitata LdigPH10_18mv male)
ACCGCCACCACAGCCGCGGCAGACGCAGCCAGGGATGCGGGGATCACCGT
GTTCGCCGTGGGAGTAGGTGAGTGAGTGTTGCGGAGTCGAATTGCCGTAA
TTTATGTAGGCTGAGCCTCCGCCGGCTTTCGCCGAAAATGCGGACGTTTG
CCTACAATAATCCGTTTTTTTTTACACTTGGTTTTAGATACCAACCCCCT
GGACAGGGGGAGGGGGGCCGTTGTTTTCGACATTTCAGCAAAAACCCCCA
AAAGAATGTTTTGGGAGGGGGAAACCGAAACCTCCCCCCCAAACAAGCCA
GCGGAGGCTTGGCCTAAATTTATACGAGAGGTTCGATTTGGTGCGTCCAT
AGCGGTTTGGGATATCGTTTCGTACATGCAGTATACGCGTCCTCATTTGC
TTATACTGCTGTTTCTTCGTGTGTTTTGTTTTGCGATTGGCACACGCTTG
CGAACACCCCGTATCCCGCCAGGAAAAGACAGCAGACAACACTAGTAAGG
TACAATTTGTCGGCTGTCGCGTTATACACTTCCGTTACGAGATTCGAACA
TTCGATCTACATTGGATCGAAGTGTACGCTAAGCACTACGTATGATACCG
ATATTAAACGAATTATACGCTATGATAACAGGAAGTAGAGTCGAGCAGTG
CCTTTCGTACATTCCGCTTGTCCTTAAAGTAGGTACATTTTGTCGCACAG
AAACACGTGCCCCCGTCCACGTCATGGGAGACAGCACAGCAACGCCATCA
CGCGGTCCAAACTGCCGCACACGTCATGGACAGTTTTTGGTCCTTACAAT
TACGGGGGACCATAGCAACCAAAACCCAGACGCAACAACCTATATATTCT
ACTATTTTCACTAAGCATACGACGTTTTTGGATCTGAATACTGTTTTTCC
CCCGTTGAAGCATCGCGAGCGCTAGTGATTGAAAGTGATTTCAGTGTTTT
AGAGTGATAATGTGCTGGGCCCTGGCCATGCTCGAAGAGCACAAAATACT
TTGGACGCCTGGACTGTAACGTCGTCCTTACATCGGGTCGCATTCCGTGG
TTAAAAAGTTTCCCTCTTGGTCAGAATGGAAAATTGGCTGTAGAAGGTGG
CGATTACAGCAACGGCCACCTCGTAGTTGGGGGACGATACAGACCGATGT
CCGAAATACACTGCAAGGAGTCGTATGGCACGGGCGCAACATGATCAACC
GTACTGTTGGGCGCTCACGCTGCTTGTAGACGGTTGATAACACCGAAGTT
ACACTTGTTTTTGAAGGATAAGATGCAGGGGCGTTTTGGTTTAGGAAGGG
TTTTGGGCTTCAAATCTGTCTCGGATATCGTTCTTCTACGCGTCTTCATT
TTCTACTGTTGTTTCTTCGTAATTGTTCGCGATTGACCCACGCTACACAT
TGTCAGATGGTAAACACATTAAACTTTTACGCGCTGATTGTCTCCTCTCT
CACTACAGGTGATGGAATTGGCGAAGCGGAACTTCTCGGGATCGGAGAAA
TCGAAGCCAACGTCTTCCTCGTCGAAGAGTTCGCCCTTCTTGACGGTAAG
CCGGACCACAACAGGGAGCTCTGAAAATAGTGGAGGCATGTTGCGATAGG
GTTAGCACCTCTTGGCCAAACTATTTCTGACTGACGATGGCTCCTCGACT
GACGAACTACCCCATATTGGTGGAATACACTTAGCGTTTCCTCCGCGCAT
ACTTATCGATTTCGGTCTCCAGGACGTTACTGGTGTCGCCTACTCTGGTC
ATTAGTCCCTCCAGGAATGTGTTATACTTTCTGTGCGATGTCGTTCGTCA
TGCCTTGGTAGGCGTTCTGCGCTGTTGTGTTGCTAGGCACTAGCATGGAC
GTCAGCTCAAAGCTAAGGTTGACAGCGACTCAACTCTGTCAATAAATATT
GTTGTTTGACAGTGCTGCGTGTGTCGCAGATAAAACCCAAACAGTTAACG
TTCTGCCTCCCCATGCCGATACTCTCCCACCCCACAATTCACGGTGATAA
CATATACAGGCTTGAGCTAAGCCGTTCGTTCGTAACCTTTACGAAGCATA
AATGATGAAGGGGGTAATATTAACAAATTACCAATGTATAAAGGCCATGT
CGCGTTGAAAACCCAGACCAAAATCCCTCTTCCCCCCCATGCCGGTACCC
CTCCCACCCCTCACCCCACAACACACGCTCCTCAGCGGCCTTGGACGACA
TCCTCTCGTCCGACGGAGGCACCACCGTACCCTGCCCTTCGACAGGCGCC
ACCGTCACGATCGAGTTCACCGTCCCAATTGGCTCTACCGGTGGCGGGTC
CATCTCAGGAAACACCGTCACGTTTTCCGCGGCTGATCTCGAGGGACAGG
CAACGGTATTCGACGTTGTGCTGGAGCTGTGCGGCACGGCCCCCGGCGGC
AGCGTCGTCGTGTCCGCGGACTACAGCGACGACCAGGGTAACACTCCCGA
CCTGTCCCAAATCGCTGGCCTGGTCGTCGGCAACGACATCTGCGAGTCTC
CCACCCCAACCCCTACCAAGATGTCGGTGGTGCCTACCCCGCACCCGACC
ACGGTGTCACACGTGCCCACCCCTCACCCGACCACAGTGTCGCACGTTCC
TACCCCGCACCCGACCATGGTGTCACACGTGCCTACCCCTCACCCGACCA
TGGTTTCACACGTGCCTACCCCGCACCCGACCAAGCTGTCGGTGGAGCCT
ACTCCATACCCGACCAAGATGGAACCGGAGCCTACCCCGTGCCCGGACGA
CCAGAAGCACCCCAAGGGGCACCCCAAGCGCGGCGAACACCTCGACAAGT
GCGGCGCGCCGAAGCACTCCACTTACCTCGGCTGCTACGTGGATGAGGCT
CAGAACCGTGCCCTCAAGGGCCCCATGACCAGTTCACCCGACATGACGCC
GCAGGTGAGAAAATCAAAGTAGTCCTGGGAGTTCTGAATAAGCGCGTGCT
ATATACGGTAGGGGTAGCACCTGAACTACCTGAGGCTCGTCACTTGAGAA
GCCAGGCACCGACACCGAAAAAGGTAGGAACCTAATCGCGATACACAATC
GCACGGTGAAGGCATCTCTCGGATAACCTTGGCAAGTACACGTCTGACCC
AGAGATTTCGGGTGGCTCCCCAGATGAGGAGCCCGGTAAATGACAAAGAA
ATATTTGGGCGCAAAAAGGCAACCGCTATCGGCAGCACGGCTCAATATGA
CAACACGACTTGCTGTGGTGGGTCGTGGTCGAGCCTTGAGCATGCACGGA
TGAAGTATCTATGACGCCTGAAAAGGTAGCAGCTGAATGTTGTGAGCTTC
CTCACGTGAAGGGGCTCTAGCTCTCACCCATTAGCCGACTCTGAGAAAAT
TTGTACGCTACTCCCTAGCACAATCCCACGGGCAAGGTATCCAGGGCTAC
GCTAGGGAGATCACTTGAGGGTTTCGTTTTTTAAGCGTCGCGAAGTGGAT
CATATCCCTTTGCGGTCTAAATTGTTGGTGCGTTTCGGTTTCGTGATATG
CACTGCCGTAGAGTAGTCCGCCTCGCTGCGCCAACAATATATTGCTACGT
CCGTTTCAATCGTTGGTGCGTTTCGGTTTCGTGACATGCACTACCGCTGA
GTAGTCCGTTTCGCTGCGCCAACAATATATTGATACGTCCGTTTTTTTTT
ATATTTTGTACAAAGCCGCTCGCGCGAGTGCCCTAAATTCGGTGGTGAAA
ACAAGAGTGTCCCCCCTACCGTAGCTGTGGTCCAACGAAACATACTGTAA
CATACACATAGGCTTCAACGATGTTGGGTAGCCCCGGTAGCTCTTCAGTT
GAGGAGCGTGATCAGTGATAAAAGTTTGGGGTCAAAAGCGCAACTATTTC
CGTAGCATGACACCCAAATGTCACCACCGATAGGCGCAGCAAGTGATCCC
ATTGCTCCTCCCGCCCGGGTATTGTTTCCTCAGATGTGCGCGGAATACTG
CGATTCCTCGGATTACGAGTACTTCGGCACGGCCTACGCAACAGGTGGGT
CATTTTGCTTCTGCCTATAAACAAGCCACACACACCCGACAACACGAGCA
GGAATGCTGGGAAAATCCAAATACCATTGTATGATTGTGTACATTTGATA
AGTACGCGAGAGCTGCTACATACCCGTTGACACGAGGAGAAATGCTGATA
AAAAACCCCATAATATTCTAAGGTGGTTGACAAGGTAGTACGCGTGAGCC
GCATACACGTTAACAGAAGGAGAAATACTGCCAAAATCCAATTATTGAAA
AGGTAGTACGCCTGAGCCGCAGAATATCCGAGAGCATAAGTAGCGTCAAG
CGAAAAGCAATGCAACTGTGACAAAGTTGATTGGTACAGCAGTACTCTGC
AATTGTAACGCGGGCTACGATAGGGGTAGCACTTGTTTCGCCAAATTTAT
TGTGACTGACCCCGAGGCTCCTAAACCGGGCAGCTACGAAATATTATTCG
TGTTTTGCTGCATGTTGTTCCGTCATACACCTACTGTAGTCCTTGTTGTT
CTTCCGGTTAAGCGTACCATTTTTACCGTATCTTAGGTTTGGGTGAGGAA
ACGAGCCTCTCAAGTAATGAGCCTGGGAAGACTGAGGTGCACCCCTACCA
ACTCGTGCAGCTGTATATATTGTTGGACGGCGAGAGTTAGGACAGGGCCG
ACCGCTAGAGCAGTCTATTAATAGACGTCGAACAGGTCTTCCCTCAGATT
CTACATGCGATAAAAAGGGCAATACCTCGAAGTATGACAGTTGGGTTATT
GCGTAATAATTGGTTACCATGCAGTGCGTTGCGTAGCAGGTACCGCGTTG
ATAGCGGTTGCTGACGCAGCTTCCGCGGCTGGTTAGGGCTATCTAATTTC
CTTTGATTCGACTCGTGGCTTGTCAACTCCGTTCCCGAGTTTACTAGAAA
TAACTCTTTGCTGCGATGCCTCCGCCTATACGTGACCTCTTAATCTATCT
GCAGACTGCCACTGCGGTGACACCCAGCCTGAATCCAGGGAAGGCGTGTG
CGACTACGAGTGCTCTGGAGACAACTACAAGGCGTGCGGAGGCGTCGGCA
CCATGAGCGTCTACAAATCCGACAACTACGGAGGCCACTAAGAGCACCCT
TGGTTGCGCCGCATGTGACTGTCAAAAGTCTCCTGCGATCGAAATCTAGC
AACGACTGCTGCTGCAACAGCGGGGCTAGTCCCTATTTTCAATGCTGTCA
CTGGGAGCACCCTTTGTTACGCC

Coding sequence (CDS) from alignment at L-digitata_M_contig10227:1217..6439+

>mRNA_L-digitata_M_contig10227.1.1 ID=mRNA_L-digitata_M_contig10227.1.1|Name=mRNA_L-digitata_M_contig10227.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=1071bp|location=Sequence derived from alignment at L-digitata_M_contig10227:1217..6439+ (Laminaria digitata LdigPH10_18mv male)
ACCGCCACCACAGCCGCGGCAGACGCAGCCAGGGATGCGGGGATCACCGT
GTTCGCCGTGGGAGTAGGTGATGGAATTGGCGAAGCGGAACTTCTCGGGA
TCGGAGAAATCGAAGCCAACGTCTTCCTCGTCGAAGAGTTCGCCCTTCTT
GACGCGGCCTTGGACGACATCCTCTCGTCCGACGGAGGCACCACCGTACC
CTGCCCTTCGACAGGCGCCACCGTCACGATCGAGTTCACCGTCCCAATTG
GCTCTACCGGTGGCGGGTCCATCTCAGGAAACACCGTCACGTTTTCCGCG
GCTGATCTCGAGGGACAGGCAACGGTATTCGACGTTGTGCTGGAGCTGTG
CGGCACGGCCCCCGGCGGCAGCGTCGTCGTGTCCGCGGACTACAGCGACG
ACCAGGGTAACACTCCCGACCTGTCCCAAATCGCTGGCCTGGTCGTCGGC
AACGACATCTGCGAGTCTCCCACCCCAACCCCTACCAAGATGTCGGTGGT
GCCTACCCCGCACCCGACCACGGTGTCACACGTGCCCACCCCTCACCCGA
CCACAGTGTCGCACGTTCCTACCCCGCACCCGACCATGGTGTCACACGTG
CCTACCCCTCACCCGACCATGGTTTCACACGTGCCTACCCCGCACCCGAC
CAAGCTGTCGGTGGAGCCTACTCCATACCCGACCAAGATGGAACCGGAGC
CTACCCCGTGCCCGGACGACCAGAAGCACCCCAAGGGGCACCCCAAGCGC
GGCGAACACCTCGACAAGTGCGGCGCGCCGAAGCACTCCACTTACCTCGG
CTGCTACGTGGATGAGGCTCAGAACCGTGCCCTCAAGGGCCCCATGACCA
GTTCACCCGACATGACGCCGCAGATGTGCGCGGAATACTGCGATTCCTCG
GATTACGAGTACTTCGGCACGGCCTACGCAACAGACTGCCACTGCGGTGA
CACCCAGCCTGAATCCAGGGAAGGCGTGTGCGACTACGAGTGCTCTGGAG
ACAACTACAAGGCGTGCGGAGGCGTCGGCACCATGAGCGTCTACAAATCC
GACAACTACGGAGGCCACTAA