prot_L-digitata_M_contig10227.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: D7FY49_ECTSI (Similar to collagen, partial n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY49_ECTSI) HSP 1 Score: 120 bits (300), Expect = 2.550e-27 Identity = 73/147 (49.66%), Postives = 92/147 (62.59%), Query Frame = 0
Query: 7 ADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFT--VPIGSTGGG--SISGNTVTFSAADLEGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVV 149
ADAAR G ++AVGVG G + LL IG EANVF V+ F LD ALDDI+S+ GG+ VPC +TGATVT++F V + GG + G V F+ DLE T F+V L+ CG G V+ S Y+DD+GNTPDLS + G V
Sbjct: 190 ADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEELDLALDDIVSTSGGS-VPCAATGATVTVQFNGMVTEATVDGGVATYDGGDVVFTVDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSALEGEAV 335
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: D7FHN6_ECTSI (Glycin-rich protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN6_ECTSI) HSP 1 Score: 120 bits (300), Expect = 5.220e-26 Identity = 73/147 (49.66%), Postives = 92/147 (62.59%), Query Frame = 0
Query: 7 ADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFT--VPIGSTGGG--SISGNTVTFSAADLEGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVV 149
ADAAR G ++AVGVG G + LL IG EANVF V+ F LD ALDDI+S+ GG+ VPC +TGATVT++F V + GG + G V F+ DLE T F+V L+ CG G V+ S Y+DD+GNTPDLS + G V
Sbjct: 197 ADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEELDLALDDIVSASGGS-VPCAATGATVTVQFNGMVTEATVDGGVATYDGGDVVFTIDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSALEGWAV 342
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: A0A6H5JRK3_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK3_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.020e-25 Identity = 72/147 (48.98%), Postives = 92/147 (62.59%), Query Frame = 0
Query: 7 ADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFT--VPIGSTGGG--SISGNTVTFSAADLEGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVV 149
ADAAR G ++AVGVG G + LL IG EANVF V+ F LD AL+DI+S+ GG+ VPC +TGATVT++F V + GG + G V F+ DLE T F+V L+ CG G V+ S Y+DD+GNTPDLS + G V
Sbjct: 207 ADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEELDLALEDIVSASGGS-VPCAATGATVTVQFNGMVTEATVDGGVATYDGGDVVFTVDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSALEGWAV 352
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: D8LLU2_ECTSI (Similar to integrin alpha Hr1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU2_ECTSI) HSP 1 Score: 111 bits (277), Expect = 4.170e-24 Identity = 71/152 (46.71%), Postives = 89/152 (58.55%), Query Frame = 0
Query: 5 AAADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFTVPIGSTGGGSISGNTVTFSAADL-------EGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVV 149
A ADAARD G V+AVGVG G + LL IG EANVF V+ F LD AL ILS+ G + VPC +TGATVT+EF G G ++ G + T+ E T F+V L+ CG GG ++ S Y+DD+GNTPDLS + G V
Sbjct: 175 AEADAARDEGTIVYAVGVGTGPTQEILLDIGGEEANVFDVDGFDELDVALAGILSASGSS-VPCAATGATVTVEFN---GMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYADDEGNTPDLSSLEGSAV 322
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: D7G513_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G513_ECTSI) HSP 1 Score: 106 bits (265), Expect = 1.720e-21 Identity = 69/172 (40.12%), Postives = 95/172 (55.23%), Query Frame = 0
Query: 7 ADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFTVPIGSTGGG---------SISGNTVTFSAADLEGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLS--QIAGLVVGNDICESP-----TPTPT 162
ADAARD G V+AVGVG + EA LL IG NVF F LD LD+I+S+ + +PC +T A +++EF + + GG S GN V F +LE T F+VVL+ CG GG++V Y D++ N PDL+ ++AG+V D +P TP+PT
Sbjct: 189 ADAARDEGTIVYAVGVGPDVSEATLLSIGGDLTNVFDASNFTELDNTLDEIVSTSVDS-IPCAATDAVISVEFNAMVTAASGGEGGSVPASVSEGGNVVVFEVPNLEATPTSFEVVLDTCGETEGGAIVADVSYVDEEDNEPDLTSIEVAGVVPTCDGAATPPPVAVTPSPT 359
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 4.170e-19 Identity = 63/150 (42.00%), Postives = 84/150 (56.00%), Query Frame = 0
Query: 7 ADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFTVPIGSTGGGSISGNTVTFSAADL-------EGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVV 149
ADAAR G V+AVGVG G E+ LL I ++N F V++F LD L S G++VPC +TGATVT+EF G G ++ G + T+ E T F+V L+ CG GG ++ S Y+DD+GNTPDLS + G V
Sbjct: 177 ADAARAEGTIVYAVGVGSGPTESVLLDIAGDDSNKFSVDDFDELDGIL-----SASGSSVPCAATGATVTVEFN---GMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYTDDEGNTPDLSSLEGSAV 318
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: A0A8C4S0J0_ERPCA (WSC domain containing 1 n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4S0J0_ERPCA) HSP 1 Score: 80.9 bits (198), Expect = 5.140e-13 Identity = 38/92 (41.30%), Postives = 56/92 (60.87%), Query Frame = 0
Query: 264 TYLGCYVDEAQNRALKGPMTSS-PDMTPQMCAEYCDSSDYEYFGTAYATDCHCGD--TQPESREGVCDYECSGDNYKACGGVGTMSVYKSDN 352
TY+GC+VD+A++RALKG + MT MC + C S Y + G Y +C+CG+ T R+ C+ +C G+ CGGVG +S+YK +N
Sbjct: 140 TYVGCFVDDAKSRALKGTVFYDFRKMTSSMCRDTCSESGYLFAGLEYGAECYCGNRITATRVRQEDCNLDCKGEKGTICGGVGRLSIYKVEN 231
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: A0A6P3VXX5_CLUHA (WSC domain-containing protein 1 n=2 Tax=Clupeidae TaxID=55118 RepID=A0A6P3VXX5_CLUHA) HSP 1 Score: 80.9 bits (198), Expect = 5.150e-13 Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = 0
Query: 259 APKHSTYLGCYVDEAQNRALKGPMTSS-PDMTPQMCAEYCDSSDYEYFGTAYATDCHCGD--TQPESREGVCDYECSGDNYKACGGVGTMSVYK 349
AP TY+GC++D+A++RALKG + MT +C + C S Y++ G Y ++C+CG+ P RE C+ +C G+ CGGV +++YK
Sbjct: 138 APHKGTYIGCFLDDAKDRALKGTVFYDFRRMTTSLCQDTCSESGYQFAGLEYGSECYCGNRIAGPRMREEECNLDCKGEKGSICGGVARLAIYK 231
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: A0A3B3SBR9_9TELE (WSC domain containing 1 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SBR9_9TELE) HSP 1 Score: 80.5 bits (197), Expect = 6.800e-13 Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 0
Query: 264 TYLGCYVDEAQNRALKGPMTSS-PDMTPQMCAEYCDSSDYEYFGTAYATDCHCGDTQPESR--EGVCDYECSGDNYKACGGVGTMSVYK 349
TY+GC++D+A+ RALKG + MT MC + C S Y++ G Y ++C+CG+ SR E C+ +C G+ CGGVG +SVYK
Sbjct: 132 TYIGCFLDDAKGRALKGAVFYDFRKMTSTMCQDTCSESGYQFAGLEYGSECYCGNRVGSSRVREEDCNLDCKGERGSPCGGVGRLSVYK 220
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: UPI0015601E89 (WSC domain-containing protein 1-like n=3 Tax=Acipenseroidei TaxID=186622 RepID=UPI0015601E89) HSP 1 Score: 79.0 bits (193), Expect = 2.250e-12 Identity = 35/92 (38.04%), Postives = 57/92 (61.96%), Query Frame = 0
Query: 264 TYLGCYVDEAQNRALKGPMTSS-PDMTPQMCAEYCDSSDYEYFGTAYATDCHCGD--TQPESREGVCDYECSGDNYKACGGVGTMSVYKSDN 352
TY+GC++D+++ RALKG + MT +C + C S Y + G Y +C+CG+ P++RE C+ +C G+ CGGVG +SV+K ++
Sbjct: 145 TYIGCFLDDSKERALKGTVFYDFRKMTSSLCQDTCSESGYLFAGLEYGAECYCGNRIAAPKTREEDCNLDCKGEKGSVCGGVGRLSVFKVED 236 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_L-digitata_M_contig10227.1.1 ID=prot_L-digitata_M_contig10227.1.1|Name=mRNA_L-digitata_M_contig10227.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=357bpback to top |