prot_L-digitata_M_contig10227.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10227.1.1
Unique Nameprot_L-digitata_M_contig10227.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length357
Homology
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: D7FY49_ECTSI (Similar to collagen, partial n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY49_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 2.550e-27
Identity = 73/147 (49.66%), Postives = 92/147 (62.59%), Query Frame = 0
Query:    7 ADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFT--VPIGSTGGG--SISGNTVTFSAADLEGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVV 149
            ADAAR  G  ++AVGVG G  +  LL IG  EANVF V+ F  LD ALDDI+S+ GG+ VPC +TGATVT++F   V   +  GG  +  G  V F+  DLE   T F+V L+ CG   G  V+ S  Y+DD+GNTPDLS + G  V
Sbjct:  190 ADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEELDLALDDIVSTSGGS-VPCAATGATVTVQFNGMVTEATVDGGVATYDGGDVVFTVDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSALEGEAV 335          
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: D7FHN6_ECTSI (Glycin-rich protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN6_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 5.220e-26
Identity = 73/147 (49.66%), Postives = 92/147 (62.59%), Query Frame = 0
Query:    7 ADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFT--VPIGSTGGG--SISGNTVTFSAADLEGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVV 149
            ADAAR  G  ++AVGVG G  +  LL IG  EANVF V+ F  LD ALDDI+S+ GG+ VPC +TGATVT++F   V   +  GG  +  G  V F+  DLE   T F+V L+ CG   G  V+ S  Y+DD+GNTPDLS + G  V
Sbjct:  197 ADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEELDLALDDIVSASGGS-VPCAATGATVTVQFNGMVTEATVDGGVATYDGGDVVFTIDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSALEGWAV 342          
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: A0A6H5JRK3_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK3_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.020e-25
Identity = 72/147 (48.98%), Postives = 92/147 (62.59%), Query Frame = 0
Query:    7 ADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFT--VPIGSTGGG--SISGNTVTFSAADLEGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVV 149
            ADAAR  G  ++AVGVG G  +  LL IG  EANVF V+ F  LD AL+DI+S+ GG+ VPC +TGATVT++F   V   +  GG  +  G  V F+  DLE   T F+V L+ CG   G  V+ S  Y+DD+GNTPDLS + G  V
Sbjct:  207 ADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEELDLALEDIVSASGGS-VPCAATGATVTVQFNGMVTEATVDGGVATYDGGDVVFTVDDLEATPTNFEVWLDWCGQPEGAEVIASVSYADDEGNTPDLSALEGWAV 352          
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: D8LLU2_ECTSI (Similar to integrin alpha Hr1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU2_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 4.170e-24
Identity = 71/152 (46.71%), Postives = 89/152 (58.55%), Query Frame = 0
Query:    5 AAADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFTVPIGSTGGGSISGNTVTFSAADL-------EGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVV 149
            A ADAARD G  V+AVGVG G  +  LL IG  EANVF V+ F  LD AL  ILS+ G + VPC +TGATVT+EF    G   G ++ G + T+            E   T F+V L+ CG   GG ++ S  Y+DD+GNTPDLS + G  V
Sbjct:  175 AEADAARDEGTIVYAVGVGTGPTQEILLDIGGEEANVFDVDGFDELDVALAGILSASGSS-VPCAATGATVTVEFN---GMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYADDEGNTPDLSSLEGSAV 322          
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: D7G513_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G513_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 1.720e-21
Identity = 69/172 (40.12%), Postives = 95/172 (55.23%), Query Frame = 0
Query:    7 ADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFTVPIGSTGGG---------SISGNTVTFSAADLEGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLS--QIAGLVVGNDICESP-----TPTPT 162
            ADAARD G  V+AVGVG  + EA LL IG    NVF    F  LD  LD+I+S+   + +PC +T A +++EF   + +  GG         S  GN V F   +LE   T F+VVL+ CG   GG++V    Y D++ N PDL+  ++AG+V   D   +P     TP+PT
Sbjct:  189 ADAARDEGTIVYAVGVGPDVSEATLLSIGGDLTNVFDASNFTELDNTLDEIVSTSVDS-IPCAATDAVISVEFNAMVTAASGGEGGSVPASVSEGGNVVVFEVPNLEATPTSFEVVLDTCGETEGGAIVADVSYVDEEDNEPDLTSIEVAGVVPTCDGAATPPPVAVTPSPT 359          
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 4.170e-19
Identity = 63/150 (42.00%), Postives = 84/150 (56.00%), Query Frame = 0
Query:    7 ADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALLDAALDDILSSDGGTTVPCPSTGATVTIEFTVPIGSTGGGSISGNTVTFSAADL-------EGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVV 149
            ADAAR  G  V+AVGVG G  E+ LL I   ++N F V++F  LD  L     S  G++VPC +TGATVT+EF    G   G ++ G + T+            E   T F+V L+ CG   GG ++ S  Y+DD+GNTPDLS + G  V
Sbjct:  177 ADAARAEGTIVYAVGVGSGPTESVLLDIAGDDSNKFSVDDFDELDGIL-----SASGSSVPCAATGATVTVEFN---GMVTGATVDGGSATYXXXXXXXXXXXXEATPTDFEVSLDWCGEPEGGEIIASVSYTDDEGNTPDLSSLEGSAV 318          
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: A0A8C4S0J0_ERPCA (WSC domain containing 1 n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4S0J0_ERPCA)

HSP 1 Score: 80.9 bits (198), Expect = 5.140e-13
Identity = 38/92 (41.30%), Postives = 56/92 (60.87%), Query Frame = 0
Query:  264 TYLGCYVDEAQNRALKGPMTSS-PDMTPQMCAEYCDSSDYEYFGTAYATDCHCGD--TQPESREGVCDYECSGDNYKACGGVGTMSVYKSDN 352
            TY+GC+VD+A++RALKG +      MT  MC + C  S Y + G  Y  +C+CG+  T    R+  C+ +C G+    CGGVG +S+YK +N
Sbjct:  140 TYVGCFVDDAKSRALKGTVFYDFRKMTSSMCRDTCSESGYLFAGLEYGAECYCGNRITATRVRQEDCNLDCKGEKGTICGGVGRLSIYKVEN 231          
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: A0A6P3VXX5_CLUHA (WSC domain-containing protein 1 n=2 Tax=Clupeidae TaxID=55118 RepID=A0A6P3VXX5_CLUHA)

HSP 1 Score: 80.9 bits (198), Expect = 5.150e-13
Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = 0
Query:  259 APKHSTYLGCYVDEAQNRALKGPMTSS-PDMTPQMCAEYCDSSDYEYFGTAYATDCHCGD--TQPESREGVCDYECSGDNYKACGGVGTMSVYK 349
            AP   TY+GC++D+A++RALKG +      MT  +C + C  S Y++ G  Y ++C+CG+    P  RE  C+ +C G+    CGGV  +++YK
Sbjct:  138 APHKGTYIGCFLDDAKDRALKGTVFYDFRRMTTSLCQDTCSESGYQFAGLEYGSECYCGNRIAGPRMREEECNLDCKGEKGSICGGVARLAIYK 231          
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: A0A3B3SBR9_9TELE (WSC domain containing 1 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SBR9_9TELE)

HSP 1 Score: 80.5 bits (197), Expect = 6.800e-13
Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 0
Query:  264 TYLGCYVDEAQNRALKGPMTSS-PDMTPQMCAEYCDSSDYEYFGTAYATDCHCGDTQPESR--EGVCDYECSGDNYKACGGVGTMSVYK 349
            TY+GC++D+A+ RALKG +      MT  MC + C  S Y++ G  Y ++C+CG+    SR  E  C+ +C G+    CGGVG +SVYK
Sbjct:  132 TYIGCFLDDAKGRALKGAVFYDFRKMTSTMCQDTCSESGYQFAGLEYGSECYCGNRVGSSRVREEDCNLDCKGERGSPCGGVGRLSVYK 220          
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Match: UPI0015601E89 (WSC domain-containing protein 1-like n=3 Tax=Acipenseroidei TaxID=186622 RepID=UPI0015601E89)

HSP 1 Score: 79.0 bits (193), Expect = 2.250e-12
Identity = 35/92 (38.04%), Postives = 57/92 (61.96%), Query Frame = 0
Query:  264 TYLGCYVDEAQNRALKGPMTSS-PDMTPQMCAEYCDSSDYEYFGTAYATDCHCGD--TQPESREGVCDYECSGDNYKACGGVGTMSVYKSDN 352
            TY+GC++D+++ RALKG +      MT  +C + C  S Y + G  Y  +C+CG+    P++RE  C+ +C G+    CGGVG +SV+K ++
Sbjct:  145 TYIGCFLDDSKERALKGTVFYDFRKMTSSLCQDTCSESGYLFAGLEYGAECYCGNRIAAPKTREEDCNLDCKGEKGSVCGGVGRLSVFKVED 236          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10227.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY49_ECTSI2.550e-2749.66Similar to collagen, partial n=2 Tax=Ectocarpus si... [more]
D7FHN6_ECTSI5.220e-2649.66Glycin-rich protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5JRK3_9PHAE1.020e-2548.98VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LLU2_ECTSI4.170e-2446.71Similar to integrin alpha Hr1-like n=1 Tax=Ectocar... [more]
D7G513_ECTSI1.720e-2140.12VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JNZ2_9PHAE4.170e-1942.00VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A8C4S0J0_ERPCA5.140e-1341.30WSC domain containing 1 n=2 Tax=Polypteridae TaxID... [more]
A0A6P3VXX5_CLUHA5.150e-1338.30WSC domain-containing protein 1 n=2 Tax=Clupeidae ... [more]
A0A3B3SBR9_9TELE6.800e-1342.70WSC domain containing 1 n=2 Tax=Paramormyrops king... [more]
UPI0015601E892.250e-1238.04WSC domain-containing protein 1-like n=3 Tax=Acipe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 196..217
score: 37.27
coord: 223..239
score: 45.88
coord: 183..195
score: 36.92
coord: 156..172
score: 43.53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..253
NoneNo IPR availablePANTHERPTHR24269KREMEN PROTEINcoord: 214..348
NoneNo IPR availablePANTHERPTHR24269:SF16PROTEIN CBG14225coord: 214..348
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 262..351
e-value: 1.9E-11
score: 54.0
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 265..341
e-value: 1.4E-15
score: 57.2
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 262..351
score: 11.285564
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 1..61
e-value: 4.6E-8
score: 35.1
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 4..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10227contigL-digitata_M_contig10227:1217..6307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10227.1.1mRNA_L-digitata_M_contig10227.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10227 1217..6439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10227.1.1 ID=prot_L-digitata_M_contig10227.1.1|Name=mRNA_L-digitata_M_contig10227.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=357bp
TATTAAADAARDAGITVFAVGVGDGIGEAELLGIGEIEANVFLVEEFALL
DAALDDILSSDGGTTVPCPSTGATVTIEFTVPIGSTGGGSISGNTVTFSA
ADLEGQATVFDVVLELCGTAPGGSVVVSADYSDDQGNTPDLSQIAGLVVG
NDICESPTPTPTKMSVVPTPHPTTVSHVPTPHPTTVSHVPTPHPTMVSHV
PTPHPTMVSHVPTPHPTKLSVEPTPYPTKMEPEPTPCPDDQKHPKGHPKR
GEHLDKCGAPKHSTYLGCYVDEAQNRALKGPMTSSPDMTPQMCAEYCDSS
DYEYFGTAYATDCHCGDTQPESREGVCDYECSGDNYKACGGVGTMSVYKS
DNYGGH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd
IPR036465vWFA_dom_sf