prot_L-digitata_M_contig99978.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99978.1.1
Unique Nameprot_L-digitata_M_contig99978.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length277
Homology
BLAST of mRNA_L-digitata_M_contig99978.1.1 vs. uniprot
Match: A0A2D8PV73_9PROT (LigB domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PV73_9PROT)

HSP 1 Score: 518 bits (1334), Expect = 4.940e-185
Identity = 236/277 (85.20%), Postives = 257/277 (92.78%), Query Frame = 0
Query:    1 MADLVFATGLSHAPGLTGWLDQAPEHEQKSLTDGFNKLGELLRASKPDAIIGIANDHVLNMPLHDLHDFCVGTAESWSGPAEWFRDWVNVDPYTVQGASGIARTLLDGLSGRGFDTTSKTDLLFDDNWSVPLKYLTPDYDIPLVPIHMNCVVPPVPSPQHCYDCGLAVKDIVENDLPDGLRVAFMGTGGLSHDPGGPKYFDVDEEFDRWFLALLEEGDPKKVLRECTMEKMVAAGDGGTSELIAWIAAMGAVGTRPAKTLCYEPSVALRCGMGCIYW 277
            MA+LVF TGLSHAPGLTGWLDQAPEHEQKSLTDGFN LGELLRA++PD IIGIANDHVLNMPLHDLHDFCVGTAE W GPAEWF+DWVNV+PYTV+GASG+A+TL +GLSGR FD TSK +LLFDDNWSVPL YLTP++DIPLVPIHMNCVVPPVPSP+HCYD G AVK+IVENDLPDGL VA MGTGGLSHDPGGPKYFDVDEEFDRWFL +LE+GDP+ VLRECT+EKMVAAGDGGTSELIAWIAAMGAVG R A T+CYEP+V LRCGMGC+YW
Sbjct:    1 MAELVFVTGLSHAPGLTGWLDQAPEHEQKSLTDGFNMLGELLRATQPDVIIGIANDHVLNMPLHDLHDFCVGTAEVWQGPAEWFQDWVNVEPYTVRGASGLAKTLYEGLSGRSFDITSKPELLFDDNWSVPLTYLTPEFDIPLVPIHMNCVVPPVPSPEHCYDFGKAVKEIVENDLPDGLSVALMGTGGLSHDPGGPKYFDVDEEFDRWFLDILEQGDPEMVLRECTIEKMVAAGDGGTSELIAWIAAMGAVGNREAHTICYEPAVELRCGMGCVYW 277          
BLAST of mRNA_L-digitata_M_contig99978.1.1 vs. uniprot
Match: A0A2S6QAJ0_9PROT (Protocatechuate 4,5-dioxygenase beta chain n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6QAJ0_9PROT)

HSP 1 Score: 474 bits (1220), Expect = 1.040e-167
Identity = 213/277 (76.90%), Postives = 241/277 (87.00%), Query Frame = 0
Query:    1 MADLVFATGLSHAPGLTGWLDQAPEHEQKSLTDGFNKLGELLRASKPDAIIGIANDHVLNMPLHDLHDFCVGTAESWSGPAEWFRDWVNVDPYTVQGASGIARTLLDGLSGRGFDTTSKTDLLFDDNWSVPLKYLTPDYDIPLVPIHMNCVVPPVPSPQHCYDCGLAVKDIVENDLPDGLRVAFMGTGGLSHDPGGPKYFDVDEEFDRWFLALLEEGDPKKVLRECTMEKMVAAGDGGTSELIAWIAAMGAVGTRPAKTLCYEPSVALRCGMGCIYW 277
            MA+L F TGLSHAPG+TGWLD+APE EQKSLT+GF  LGE LRA+KPD IIG+ANDHVLNMP+ D HDFC+GT+ +W+GPAEWFRDWVNV PY+V+G S +A+ L DGLSG GFD  S+ +LLFDDNWSVPLKYLTPDYDIPLVPIHMNC+VPP+PSPQHC++ G AV  I+ENDLP  +RVAFMGTGGLSHDPGGPKYFDVDEEFDRWFL LLEEGDP+KVLRECT  KM AAGDGGTSEL+AWI+AM  VG R A T CYEP+V LRCGMGC+YW
Sbjct:    1 MAELAFVTGLSHAPGMTGWLDRAPEREQKSLTEGFTLLGEKLRAAKPDLIIGLANDHVLNMPVDDTHDFCIGTSAAWTGPAEWFRDWVNVQPYSVRGNSPVAQLLFDGLSGYGFDIISRNELLFDDNWSVPLKYLTPDYDIPLVPIHMNCIVPPIPSPQHCFNFGQAVHKIIENDLPTDMRVAFMGTGGLSHDPGGPKYFDVDEEFDRWFLGLLEEGDPEKVLRECTPAKMSAAGDGGTSELVAWISAMAMVGDRKAITACYEPAVELRCGMGCVYW 277          
BLAST of mRNA_L-digitata_M_contig99978.1.1 vs. uniprot
Match: A0A3D2BUR0_9PROT (LigB domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BUR0_9PROT)

HSP 1 Score: 470 bits (1210), Expect = 3.870e-166
Identity = 211/277 (76.17%), Postives = 240/277 (86.64%), Query Frame = 0
Query:    1 MADLVFATGLSHAPGLTGWLDQAPEHEQKSLTDGFNKLGELLRASKPDAIIGIANDHVLNMPLHDLHDFCVGTAESWSGPAEWFRDWVNVDPYTVQGASGIARTLLDGLSGRGFDTTSKTDLLFDDNWSVPLKYLTPDYDIPLVPIHMNCVVPPVPSPQHCYDCGLAVKDIVENDLPDGLRVAFMGTGGLSHDPGGPKYFDVDEEFDRWFLALLEEGDPKKVLRECTMEKMVAAGDGGTSELIAWIAAMGAVGTRPAKTLCYEPSVALRCGMGCIYW 277
            MA LVF TGLSHAPG+TGWLD A   EQKSLTDGFN LGE LRA+KPD IIG+ANDHVLNMP+ D HDFCVGTA++W GPAEWFRDWVNVDPY++ G S  A+ L DGLSG+G+D  SK +LLFDDNWSVPLKYLTP Y++PLVPIHMNC+VPP+PSP+ CY+ G A++ I+ENDLPD LRVAF+GTGGLSHDPGGPKYFDVDEEFDRWFL LLEEGDP++VL ECT EKM AAGDGGTSELIAWI AMG VG R + T+CYEP++ LRCGMGC+YW
Sbjct:    1 MAKLVFVTGLSHAPGMTGWLDHATPEEQKSLTDGFNALGEKLRATKPDLIIGLANDHVLNMPVDDSHDFCVGTADAWKGPAEWFRDWVNVDPYSLAGNSAAAKALFDGLSGQGYDIISKDELLFDDNWSVPLKYLTPHYNVPLVPIHMNCIVPPIPSPRTCYEFGQALQKIIENDLPDDLRVAFIGTGGLSHDPGGPKYFDVDEEFDRWFLGLLEEGDPERVLSECTPEKMSAAGDGGTSELIAWIGAMGMVGDRKSVTICYEPAIELRCGMGCVYW 277          
BLAST of mRNA_L-digitata_M_contig99978.1.1 vs. uniprot
Match: A0A2D8G5C2_9PROT (LigB domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G5C2_9PROT)

HSP 1 Score: 465 bits (1196), Expect = 5.250e-164
Identity = 212/277 (76.53%), Postives = 242/277 (87.36%), Query Frame = 0
Query:    1 MADLVFATGLSHAPGLTGWLDQAPEHEQKSLTDGFNKLGELLRASKPDAIIGIANDHVLNMPLHDLHDFCVGTAESWSGPAEWFRDWVNVDPYTVQGASGIARTLLDGLSGRGFDTTSKTDLLFDDNWSVPLKYLTPDYDIPLVPIHMNCVVPPVPSPQHCYDCGLAVKDIVENDLPDGLRVAFMGTGGLSHDPGGPKYFDVDEEFDRWFLALLEEGDPKKVLRECTMEKMVAAGDGGTSELIAWIAAMGAVGTRPAKTLCYEPSVALRCGMGCIYW 277
            MA+LVF TGLSHAPGLTGWLD+AP+ EQ+SLT+GFN LG+ LRA+KPD IIG+ANDHVLNMP+ + HDFCVG ++SWSGPAEWF+DWVN+  Y V G + +A  LL+ LS +GFD  SK +LLFDDNWSVPLKYLTPDYDIPLVPIHMNC+VPPVPSP  C+D G AV+ I+EN LP  LRVAFMGTGGLSHDPGGPKYF+VDEEFDRWFLALLEEGDP+KVLRECT+EKM AAGDGGT+ELIAWIAAMG VG R + T+CYEPSV LRCGMGC+YW
Sbjct:    1 MAELVFVTGLSHAPGLTGWLDRAPQKEQQSLTEGFNLLGKKLRAAKPDLIIGLANDHVLNMPVDNQHDFCVGISDSWSGPAEWFQDWVNIGTYQVDGNAQVAGVLLNQLSTQGFDIVSKVELLFDDNWSVPLKYLTPDYDIPLVPIHMNCIVPPVPSPXKCFDFGRAVQKIIENSLPSDLRVAFMGTGGLSHDPGGPKYFEVDEEFDRWFLALLEEGDPEKVLRECTLEKMSAAGDGGTAELIAWIAAMGMVGDRGSVTICYEPSVELRCGMGCVYW 277          
BLAST of mRNA_L-digitata_M_contig99978.1.1 vs. uniprot
Match: A0A1F4DSU1_9PROT (LigB domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13 TaxID=1797498 RepID=A0A1F4DSU1_9PROT)

HSP 1 Score: 366 bits (939), Expect = 5.190e-125
Identity = 163/277 (58.84%), Postives = 202/277 (72.92%), Query Frame = 0
Query:    1 MADLVFATGLSHAPGLTGWLDQAPEHEQKSLTDGFNKLGELLRASKPDAIIGIANDHVLNMPLHDLHDFCVGTAESWSGPAEWFRDWVNVDPYTVQGASGIARTLLDGLSGRGFDTTSKTDLLFDDNWSVPLKYLTPDYDIPLVPIHMNCVVPPVPSPQHCYDCGLAVKDIVENDLPDGLRVAFMGTGGLSHDPGGPKYFDVDEEFDRWFLALLEEGDPKKVLRECTMEKMVAAGDGGTSELIAWIAAMGAVGTRPAKTLCYEPSVALRCGMGCIYW 277
            MA+LV    ++HAPGLTGWLD APE +QK L DG+ +LG LLR SKPD I+G ANDH+LN+PL +  DFC+GTA  W GPA WF DW+N++PY V G   +ART++  L  RG     + DLLFDDN+SVPL  LTP YDIPLVP+HMNC+VPPVPS   C+D G AV ++V N LP  LRVA + TGGLSHDPGGP+YF +DE FDRWFL L+E G+  + L ECT+E++ AAGDGGT EL+AW    GA     A+ +CYEP+  +RCGMG + W
Sbjct:    1 MAELVCTMAVAHAPGLTGWLDVAPEAQQKGLRDGYAELGRLLRESKPDVILGFANDHILNLPLDNTPDFCIGTASEWHGPAPWFLDWLNIEPYKVGGNPEVARTIVRELDRRGIAFAFRDDLLFDDNFSVPLTTLTPSYDIPLVPVHMNCIVPPVPSAPRCFDVGAAVAEVVRNALPAELRVALLATGGLSHDPGGPRYFQIDEAFDRWFLGLIENGEAGRALAECTLERLRAAGDGGTPELLAWFVPWGAARGAKARVVCYEPTATMRCGMGGVIW 277          
BLAST of mRNA_L-digitata_M_contig99978.1.1 vs. uniprot
Match: A0A6N7FEA9_9PROT (LigB domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FEA9_9PROT)

HSP 1 Score: 363 bits (931), Expect = 1.130e-123
Identity = 168/277 (60.65%), Postives = 207/277 (74.73%), Query Frame = 0
Query:    1 MADLVFATGLSHAPGLTGWLDQAPEHEQKSLTDGFNKLGELLRASKPDAIIGIANDHVLNMPLHDLHDFCVGTAESWSGPAEWFRDWVNVDPYTVQGASGIARTLLDGLSGRGFDTTSKTDLLFDDNWSVPLKYLTPDYDIPLVPIHMNCVVPPVPSPQHCYDCGLAVKDIVENDLPDGLRVAFMGTGGLSHDPGGPKYFDVDEEFDRWFLALLEEGDPKKVLRECTMEKMVAAGDGGTSELIAWIAAMGAVGTRPAKTLCYEPSVALRCGMGCIYW 277
            MA++     LSHAPGLTGWLD+A + E+ +L  G+ ++G  LRA KPD I+GIANDHVLN+PL +  DFCVGTA  W GPA WFRDW+NV  Y V G + +AR L+   + RG     + DLLFDDNWSVPL +LTPDYD+PLVPIHMNCVVPP+P+P  CY  G  + D++      G RV  M TGGLSHDPGGP+YF VDE FDR FLAL+EEGD +K LRE T+E+M+AAGDGGT+EL+AWI A+GA G RPA+ +CYEP+ +LRCGMG + W
Sbjct:    1 MAEIAGVIALSHAPGLTGWLDRASDAERDNLLAGYAEMGRWLRALKPDVIVGIANDHVLNLPLDNTPDFCVGTAGLWRGPAPWFRDWLNVADYIVAGHAALARRLVRDAAPRGLRLAFRDDLLFDDNWSVPLHFLTPDYDVPLVPIHMNCVVPPLPTPARCYRAGEVLADVLRGADEAG-RVVVMATGGLSHDPGGPRYFQVDEAFDRAFLALMEEGDAEKTLREATVERMIAAGDGGTTELLAWIVALGAAGGRPARIVCYEPAQSLRCGMGGVVW 276          
BLAST of mRNA_L-digitata_M_contig99978.1.1 vs. uniprot
Match: A0A4Z0BVT1_9BURK (LigB domain-containing protein n=1 Tax=Ramlibacter henchirensis TaxID=204072 RepID=A0A4Z0BVT1_9BURK)

HSP 1 Score: 342 bits (878), Expect = 9.740e-116
Identity = 148/277 (53.43%), Postives = 196/277 (70.76%), Query Frame = 0
Query:    1 MADLVFATGLSHAPGLTGWLDQAPEHEQKSLTDGFNKLGELLRASKPDAIIGIANDHVLNMPLHDLHDFCVGTAESWSGPAEWFRDWVNVDPYTVQGASGIARTLLDGLSGRGFDTTSKTDLLFDDNWSVPLKYLTPDYDIPLVPIHMNCVVPPVPSPQHCYDCGLAVKDIVENDLPDGLRVAFMGTGGLSHDPGGPKYFDVDEEFDRWFLALLEEGDPKKVLRECTMEKMVAAGDGGTSELIAWIAAMGAVGTRPAKTLCYEPSVALRCGMGCIYW 277
            MA LV    ++HAPG+TGW D+A   +++ L  G+  LG  L+A++PD +IG  NDH+LN+P  +L D C+GTA  W GPA WF+DW+ ++P+ V G   +A  L+  L  RG     + DLL DDN+SVPLK LTP +D+P +P+HMNC+VPPVP+P+ C+D G  +   +  DLP GLRVA M TGGLSHDPGGP+YF++DE FDRWFLALL++GD ++   ECT+E+M AAG GGT ELIAW  A GA    PA+ +CYEP+V LRC MG + W
Sbjct:    1 MAQLVSCMAVAHAPGMTGWFDKAEPGQRERLQAGYADLGRRLKAARPDVVIGFGNDHLLNLPFDNLPDMCIGTAAQWEGPAPWFQDWLAIEPFRVPGKPDVAHALVQALDRRGLALAFRPDLLMDDNFSVPLKVLTPQFDVPFIPVHMNCLVPPVPTPRACFDKGALIARAIAEDLPAGLRVAIMSTGGLSHDPGGPRYFEIDEAFDRWFLALLQQGDTERAFAECTLERMRAAGAGGTPELIAWFVAWGAAQGAPAEIVCYEPTVGLRCSMGGVSW 277          
BLAST of mRNA_L-digitata_M_contig99978.1.1 vs. uniprot
Match: A0A3G8GMH9_9BURK (LigB domain-containing protein n=7 Tax=Burkholderiales TaxID=80840 RepID=A0A3G8GMH9_9BURK)

HSP 1 Score: 331 bits (848), Expect = 4.040e-111
Identity = 154/280 (55.00%), Postives = 195/280 (69.64%), Query Frame = 0
Query:    1 MADLVFATGLSHAPGLTGWLDQAPEHEQKSLTDGFNKLGELLRASKPDAIIGIANDHVLNMPLHDLHDFCVGTAESWSGPAEWFRDWVNVDPYTVQGASGIARTLLDGLSGRGFDTTSKTDLLFDDNWSVPLKYLTPDYDIPLVPIHMNCVVPPVPSPQHCYDCGLAVKDIVENDLPDGLRVAFMGTGGLSHDPGGPKYFDVDEEFDRWFLALLEEGDPKKVLRECTMEKMVAAGDGGTSELIAWIAAMGAV---GTRPAKTLCYEPSVALRCGMGCIYW 277
            MA +V   G++HAPG+TGW+D+AP+HEQ  + DG+ +  +L+   +PD +IGIANDH+LN PL ++ DFCVG  E W+GPA WFRDW+NV  YTV+G   + R L+   +  G +      LLFDDNWSVPLK+L P YD+  VPIHMN +VPPVPS  HCY  G  +  IV+   P   RV  MGTGGLSHDPGG  YF V EEFDRWFLAL+EEG+  +V RE T EK++  GDGG +EL+AW+ AMGA    G   A+T+ Y PSV +RCGMG +YW
Sbjct:    1 MAKIVATLGVAHAPGVTGWIDKAPQHEQDGVLDGYAQFQKLMDEVRPDVVIGIANDHLLNFPLDNIPDFCVGIGEQWAGPAPWFRDWLNVPDYTVRGHRDLGRALVRESAKAGINHAFADKLLFDDNWSVPLKFLFPRYDVRFVPIHMNPIVPPVPSAAHCYAVGETIARIVQA-FPSDERVVIMGTGGLSHDPGGKDYFTVHEEFDRWFLALMEEGNAGRVKRELTFEKLLTGGDGGAAELLAWVVAMGAAEVAGNARAETVFYVPSVPMRCGMGGVYW 279          
BLAST of mRNA_L-digitata_M_contig99978.1.1 vs. uniprot
Match: A0A3P4B8W4_9BURK (Protocatechuate 4,5-dioxygenase beta chain n=1 Tax=Pigmentiphaga humi TaxID=2478468 RepID=A0A3P4B8W4_9BURK)

HSP 1 Score: 325 bits (833), Expect = 7.670e-109
Identity = 150/280 (53.57%), Postives = 192/280 (68.57%), Query Frame = 0
Query:    1 MADLVFATGLSHAPGLTGWLDQAPEHEQKSLTDGFNKLGELLRASKPDAIIGIANDHVLNMPLHDLHDFCVGTAESWSGPAEWFRDWVNVDPYTVQGASGIARTLLDGLSGRGFDTTSKTDLLFDDNWSVPLKYLTPDYDIPLVPIHMNCVVPPVPSPQHCYDCGLAVKDIVENDLPDGLRVAFMGTGGLSHDPGGPKYFDVDEEFDRWFLALLEEGDPKKVLRECTMEKMVAAGDGGTSELIAWIAAMGAV---GTRPAKTLCYEPSVALRCGMGCIYW 277
            MA +V   G++HAPG+TGW+D+AP+HEQ  +  G+ +  EL+   +PD +IG+ANDH+LN PL ++ DFCVG  E W+GPA WFRDW+NV  YTV+G   +AR L+   +  G +      LLFDDNWSVPLK+L P YD+  +PIHMN +VPP+PS  HCY  G  +  IV+   P   RV  MGTGGLSHDPGG  YF V E+FDRWFL L+E GD ++V RE T +KM+  GDGG  EL+AW+ AMGA    G   A+T+ Y PSV +RCGMG  YW
Sbjct:    1 MARIVATLGVAHAPGVTGWIDKAPQHEQDGVLAGYTRFRELMDELRPDVVIGVANDHLLNFPLDNIPDFCVGIGEQWNGPAPWFRDWLNVPDYTVRGHRDMARALVRESAKAGINHAFADKLLFDDNWSVPLKFLFPRYDVRFIPIHMNPIVPPIPSAAHCYAVGETLARIVQA-FPSDERVVVMGTGGLSHDPGGKDYFTVHEDFDRWFLELMESGDAERVRRELTFDKMLTGGDGGAGELLAWVVAMGAASVAGNTRAQTVFYVPSVPMRCGMGGCYW 279          
BLAST of mRNA_L-digitata_M_contig99978.1.1 vs. uniprot
Match: A0A4Z0BG52_9BURK (LigB domain-containing protein n=1 Tax=Ramlibacter rhizophilus TaxID=1781167 RepID=A0A4Z0BG52_9BURK)

HSP 1 Score: 314 bits (804), Expect = 1.940e-104
Identity = 143/280 (51.07%), Postives = 194/280 (69.29%), Query Frame = 0
Query:    1 MADLVFATGLSHAPGLTGWLDQAPEHEQKSLTDGFNKLGELLRASKPDAIIGIANDHVLNMPLHDLHDFCVGTAESWSGPAEWFRDWVNVDPYTVQGASGIARTLLDGLSGRGFDTTSKTDLLFDDNWSVPLKYLTPDYDIPLVPIHMNCVVPPVPSPQHCYDCGLAVKDIVENDLPDGLRVAFMGTGGLSHDPGGPKYFDVDEEFDRWFLALLEEGDPKKVLRECTMEKMVAAGDGGTSELIAWIAAMGA---VGTRPAKTLCYEPSVALRCGMGCIYW 277
            MA L+ + G++HAPG+TGW+D+AP HEQ+++  G+ + G  +   KPD +IG+ANDH+LN  + ++ DFCVG  + W+GPA WFRDW+NV  Y + G   +AR L+   +  G +     +LLFDDNWSVPLK+L P YD+  VPIHMN +VPPVPS   C + G  +  IV+   P   RV  MGTGGLSHDPGGP YF V E+FDRWF+AL+E GD ++  RE TM+K+++ GDGG  EL++W+ AMGA   +G   A+++ Y PSV +RCGMG  YW
Sbjct:    1 MARLIASIGIAHAPGVTGWIDKAPPHEQEAVLAGYAEFGRRMDELKPDVVIGVANDHLLNFSMDNIPDFCVGIGDEWAGPAPWFRDWLNVPDYRIGGHRPLARALVRESARAGINHAFAEELLFDDNWSVPLKFLFPRYDVRFVPIHMNPIVPPVPSAAKCLEVGRQIARIVQA-FPGDERVVLMGTGGLSHDPGGPDYFTVHEDFDRWFMALMESGDTERAGRELTMDKLLSGGDGGAGELLSWVVAMGAAAELGRPKAESVFYVPSVPMRCGMGGSYW 279          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99978.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8PV73_9PROT4.940e-18585.20LigB domain-containing protein n=1 Tax=Rhodospiril... [more]
A0A2S6QAJ0_9PROT1.040e-16776.90Protocatechuate 4,5-dioxygenase beta chain n=2 Tax... [more]
A0A3D2BUR0_9PROT3.870e-16676.17LigB domain-containing protein n=1 Tax=Rhodospiril... [more]
A0A2D8G5C2_9PROT5.250e-16476.53LigB domain-containing protein n=1 Tax=Alphaproteo... [more]
A0A1F4DSU1_9PROT5.190e-12558.84LigB domain-containing protein n=1 Tax=Betaproteob... [more]
A0A6N7FEA9_9PROT1.130e-12360.65LigB domain-containing protein n=1 Tax=Alphaproteo... [more]
A0A4Z0BVT1_9BURK9.740e-11653.43LigB domain-containing protein n=1 Tax=Ramlibacter... [more]
A0A3G8GMH9_9BURK4.040e-11155.00LigB domain-containing protein n=7 Tax=Burkholderi... [more]
A0A3P4B8W4_9BURK7.670e-10953.57Protocatechuate 4,5-dioxygenase beta chain n=1 Tax... [more]
A0A4Z0BG52_9BURK1.940e-10451.07LigB domain-containing protein n=1 Tax=Ramlibacter... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.830.10coord: 1..277
e-value: 2.0E-70
score: 239.4
NoneNo IPR availableCDDcd07359PCA_45_Doxase_B_likecoord: 3..277
e-value: 2.41806E-87
score: 259.516
NoneNo IPR availableSUPERFAMILY53213LigB-likecoord: 2..277
IPR004183Extradiol ring-cleavage dioxygenase, class III enzyme, subunit BPFAMPF02900LigBcoord: 8..256
e-value: 2.6E-35
score: 121.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99978contigL-digitata_M_contig99978:2..832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99978.1.1mRNA_L-digitata_M_contig99978.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99978 2..832 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99978.1.1 ID=prot_L-digitata_M_contig99978.1.1|Name=mRNA_L-digitata_M_contig99978.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=277bp
MADLVFATGLSHAPGLTGWLDQAPEHEQKSLTDGFNKLGELLRASKPDAI
IGIANDHVLNMPLHDLHDFCVGTAESWSGPAEWFRDWVNVDPYTVQGASG
IARTLLDGLSGRGFDTTSKTDLLFDDNWSVPLKYLTPDYDIPLVPIHMNC
VVPPVPSPQHCYDCGLAVKDIVENDLPDGLRVAFMGTGGLSHDPGGPKYF
DVDEEFDRWFLALLEEGDPKKVLRECTMEKMVAAGDGGTSELIAWIAAMG
AVGTRPAKTLCYEPSVALRCGMGCIYW
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004183Xdiol_dOase_suB