prot_L-digitata_M_contig99944.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99944.1.1
Unique Nameprot_L-digitata_M_contig99944.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length39
Homology
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BLAST of mRNA_L-digitata_M_contig99944.1.1 vs. uniprot
Match: D7G6N9_ECTSI (Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N9_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 3.680e-7
Identity = 24/29 (82.76%), Postives = 27/29 (93.10%), Query Frame = 0 
Query:    1 GDVTGVLDIAKCLYDAVTRLQRVAGRKSM 29
            GDVTG+LDIAKCLYDAV+RLQR A RKS+
Sbjct: 1599 GDVTGILDIAKCLYDAVSRLQRTAKRKSV 1627
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BLAST of mRNA_L-digitata_M_contig99944.1.1 vs. uniprot
Match: A0A836CBL7_9STRA (Myosin 29 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL7_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 4.060e-5
Identity = 21/28 (75.00%), Postives = 25/28 (89.29%), Query Frame = 0 
Query:    1 GDVTGVLDIAKCLYDAVTRLQRVAGRKS 28
            G VTGVLDIAKCLYDA+TRL+RV  ++S
Sbjct: 1597 GAVTGVLDIAKCLYDAITRLERVMAKQS 1624
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99944.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6N9_ECTSI3.680e-782.76Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A836CBL7_9STRA4.060e-575.00Myosin 29 n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99944contigL-digitata_M_contig99944:585..701 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99944.1.1mRNA_L-digitata_M_contig99944.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99944 585..701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99944.1.1 ID=prot_L-digitata_M_contig99944.1.1|Name=mRNA_L-digitata_M_contig99944.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=39bp
GDVTGVLDIAKCLYDAVTRLQRVAGRKSMGGSSDDGSDE
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