prot_L-digitata_M_contig9994.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9994.1.1
Unique Nameprot_L-digitata_M_contig9994.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length50
Homology
BLAST of mRNA_L-digitata_M_contig9994.1.1 vs. uniprot
Match: D7G359_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G359_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 2.390e-7
Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    4 QVARCEMDSDFLAKASSHMEKALRQDYGGKPTPTPPP 40
            +VA+CEMDSDFLAKA+SH+EKA  QDYG     T PP
Sbjct:  683 EVAKCEMDSDFLAKAASHVEKACMQDYGASDMTTLPP 719          
BLAST of mRNA_L-digitata_M_contig9994.1.1 vs. uniprot
Match: A0A3L6V9I7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V9I7_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 1.410e-5
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    4 QVARCEMDSDFLAKASSHMEKALRQDYGGKPTPTP 38
            + A+CEM+ D+LAKAS H+ KAL+ DYGG PT  P
Sbjct:  540 EAAKCEMECDYLAKASVHVNKALQLDYGGTPTEQP 574          
BLAST of mRNA_L-digitata_M_contig9994.1.1 vs. uniprot
Match: W4H7H1_9STRA (FHA domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H7H1_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 2.640e-5
Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 0
Query:    6 ARCEMDSDFLAKASSHMEKALRQDYGGKPTPTP 38
            A+CEM+ D+LAKAS H+ KAL+ DYGG PT  P
Sbjct:  547 AKCEMECDYLAKASVHVNKALQLDYGGTPTEQP 579          
BLAST of mRNA_L-digitata_M_contig9994.1.1 vs. uniprot
Match: A0A485KQ62_9STRA (Aste57867_10079 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQ62_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 6.760e-5
Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    4 QVARCEMDSDFLAKASSHMEKALRQDYGGKPTPTPPPSPG 43
            + A+CEM+SD+LAKAS+H+ KAL  DYGG   P P  S G
Sbjct:  527 ETAKCEMESDYLAKASTHVNKALALDYGG---PKPAESKG 563          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9994.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G359_ECTSI2.390e-767.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A3L6V9I7_9STRA1.410e-560.00Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
W4H7H1_9STRA2.640e-563.64FHA domain-containing protein n=8 Tax=Aphanomyces ... [more]
A0A485KQ62_9STRA6.760e-557.50Aste57867_10079 protein n=1 Tax=Aphanomyces stella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9994contigL-digitata_M_contig9994:911..1060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9994.1.1mRNA_L-digitata_M_contig9994.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9994 893..1060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9994.1.1 ID=prot_L-digitata_M_contig9994.1.1|Name=mRNA_L-digitata_M_contig9994.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=50bp
MADQVARCEMDSDFLAKASSHMEKALRQDYGGKPTPTPPPSPGKIRTKR*
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