prot_L-digitata_M_contig99839.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99839.1.1
Unique Nameprot_L-digitata_M_contig99839.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length283
Homology
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BLAST of mRNA_L-digitata_M_contig99839.1.1 vs. uniprot
Match: UPI00166DA6CD (leukotoxin LktA family filamentous adhesin n=1 Tax=Maritimibacter lacisalsi TaxID=1526570 RepID=UPI00166DA6CD)

HSP 1 Score: 206 bits (525), Expect = 1.030e-56
Identity = 133/290 (45.86%), Postives = 184/290 (63.45%), Query Frame = 0 
Query:    1 MTANSTKDISVEAIVAADSQGRGEAIAASYESSDVRVALGGLVTTTGDKLDLVAATEYAQANNRAIVATMANPSQPAAIGNSVNDTLAGWISQANSALSDVAGIVNSTVASTTTGAFTVVDHSVTTRADFGG---VALLEDPVTGDAGFLNAAGFDP--DISGGGTARLNVKARNHVDQLSGASVVLLGSAADAGSAFITALGSDVWRLKTAAEIGSNAVVADGTRALVQARSDLPTIDDSGVRDLQRDVQDAFASPADFELVPVAYQLVPVADLFDE--ANYITDVQVA 283
            ++AN+ KD+S+EA+VAAD  GRG+A+ AS++ +DVR ALGG V T+G  LDL + T   +A  RA+V   A+P Q  A+G+  +D L+ W++ AN A+S     V   VAST TGAF+V+ H +   A FGG        DPVT     L AAGFDP  D +  GTA+L V+ R  ++Q++G + V LG  ADAGSA I  L SDVW + + AEIG+ + V D T+ ++ A + LP+ D++ +R  Q ++QDAF S    +++PVAY L     LFDE  A YITDVQVA
Sbjct:  664 VSANAVKDLSLEALVAADPLGRGQALTASWDKTDVRAALGGRVQTSGGDLDLRSDTRVTRAITRAVVGATADPVQIPALGSIADDGLSRWLAAANGAMSSAIADVTGYVASTGTGAFSVLRHDMEAAALFGGNDGAVSYVDPVTEATATLGAAGFDPGLDATVAGTAQLLVQGRTRLEQIAGQTAVRLGEEADAGSAVIAVLSSDVWNVGSHAEIGAGSFVGDSTQTVLNALTRLPSFDETALRATQTEIQDAFDSELIPDILPVAYMLPEQDALFDEDTATYITDVQVA 953
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99839.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00166DA6CD1.030e-5645.86leukotoxin LktA family filamentous adhesin n=1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99839contigL-digitata_M_contig99839:95..943 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99839.1.1mRNA_L-digitata_M_contig99839.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99839 68..943 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99839.1.1 ID=prot_L-digitata_M_contig99839.1.1|Name=mRNA_L-digitata_M_contig99839.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=283bp
MTANSTKDISVEAIVAADSQGRGEAIAASYESSDVRVALGGLVTTTGDKL
DLVAATEYAQANNRAIVATMANPSQPAAIGNSVNDTLAGWISQANSALSD
VAGIVNSTVASTTTGAFTVVDHSVTTRADFGGVALLEDPVTGDAGFLNAA
GFDPDISGGGTARLNVKARNHVDQLSGASVVLLGSAADAGSAFITALGSD
VWRLKTAAEIGSNAVVADGTRALVQARSDLPTIDDSGVRDLQRDVQDAFA
SPADFELVPVAYQLVPVADLFDEANYITDVQVA
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