prot_L-digitata_M_contig99784.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99784.1.1
Unique Nameprot_L-digitata_M_contig99784.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length149
Homology
[Close]
BLAST of mRNA_L-digitata_M_contig99784.1.1 vs. uniprot
Match: A0A1M3NAJ5_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium 68-20 TaxID=1895795 RepID=A0A1M3NAJ5_9DELT)

HSP 1 Score: 52.8 bits (125), Expect = 3.660e-5
Identity = 47/173 (27.17%), Postives = 76/173 (43.93%), Query Frame = 0 
Query:    2 PQRTHVTGTVLSRFGSPVS-AALLELRPLSPDGRP---------GDAITDVDGSFEVDLDPGPYLLVIRPRGATSSGELV-------PVTAQTIEVVQQARQGLDLITVSLGSSLSWVVRG-GPQGTTLPGTRAELFVT---------VAGQVVSLGRSESDADGVCTIVVPQ 147
            P RT V G  +   G  +S A ++ +   SP+ RP         G  +TD DG FE+++DPGPY+L + P+  T    +V        +TAQ  E+          I V   + L++ +R   P G  +      +F T         V    V +G + +D++G   I++ Q
Sbjct:  438 PLRTRVKGRAVLTDGRALSDAEVVAIPNTSPEARPSPMFAQPRPGRTLTDDDGRFELEVDPGPYVLSVIPKAGTGFPRVVVRPEIPGSLTAQEAELAD--------IRVPAPTRLAFTLRDPSPTGNPIARAVVRVFATPAVPGGGAGVVPDPVEIGSAMTDSEGFVEILLAQ 602
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99784.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1M3NAJ5_9DELT3.660e-527.17Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.1120coord: 7..90
e-value: 2.6E-5
score: 26.4
NoneNo IPR availablePFAMPF13620CarboxypepD_regcoord: 7..77
e-value: 5.2E-8
score: 33.1
IPR008969Carboxypeptidase-like, regulatory domain superfamilySUPERFAMILY49464Carboxypeptidase regulatory domain-likecoord: 7..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99784contigL-digitata_M_contig99784:496..942 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99784.1.1mRNA_L-digitata_M_contig99784.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99784 496..942 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99784.1.1 ID=prot_L-digitata_M_contig99784.1.1|Name=mRNA_L-digitata_M_contig99784.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=149bp
LPQRTHVTGTVLSRFGSPVSAALLELRPLSPDGRPGDAITDVDGSFEVDL
DPGPYLLVIRPRGATSSGELVPVTAQTIEVVQQARQGLDLITVSLGSSLS
WVVRGGPQGTTLPGTRAELFVTVAGQVVSLGRSESDADGVCTIVVPQR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008969CarboxyPept-like_regulatory