prot_L-digitata_M_contig99685.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-digitata_M_contig99685.2.1
Unique Name	prot_L-digitata_M_contig99685.2.1
Type	polypeptide
Organism	Laminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length	99

Homology

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BLAST of mRNA_L-digitata_M_contig99685.2.1 vs. uniprot
Match: A0A4U2NQA1_BACCE (Urocanate hydratase (Fragment) n=1 Tax=Bacillus cereus TaxID=1396 RepID=A0A4U2NQA1_BACCE)

HSP 1 Score: 164 bits (415), Expect = 2.100e-50
Identity = 77/94 (81.91%), Postives = 87/94 (92.55%), Query Frame = 0

Query:    1 MKDGSDAVADWPILNAMINAVNGASWVSFHHGGGVGIGYSLHAGMVIVADGTEKAAARLQRVLTSDPGMGVIRHVDAGYDEAVDCATERAVHVP 94
            MKDGSDAVADWPILNA+IN+VNGASWVS HHGGGVG+GYSLHAGMVIVADGTE AA R++RVLTSDPGMGV+RHVDAGYD AV+ A E+ V++P
Sbjct:   39 MKDGSDAVADWPILNALINSVNGASWVSVHHGGGVGMGYSLHAGMVIVADGTEAAAKRIERVLTSDPGMGVVRHVDAGYDLAVETAKEKGVNIP 132

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BLAST of mRNA_L-digitata_M_contig99685.2.1 vs. uniprot
Match: A0A061PFY0_9BACL (Urocanate hydratase n=1 Tax=Geomicrobium sp. JCM 19039 TaxID=1460636 RepID=A0A061PFY0_9BACL)

HSP 1 Score: 162 bits (411), Expect = 5.000e-49
Identity = 75/98 (76.53%), Postives = 88/98 (89.80%), Query Frame = 0

Query:    1 MKDGSDAVADWPILNAMINAVNGASWVSFHHGGGVGIGYSLHAGMVIVADGTEKAAARLQRVLTSDPGMGVIRHVDAGYDEAVDCATERAVHVPGLNR 98
            MKDGSDAVADWPILNAMIN+V GASWVS HHGGGVG+GYSLHAGMVIVADGT+ A ARL+RVLT+DPGMG++RHVDAGYDEA+D A    +++P L++
Sbjct:   95 MKDGSDAVADWPILNAMINSVGGASWVSVHHGGGVGMGYSLHAGMVIVADGTKDAEARLERVLTTDPGMGIVRHVDAGYDEAIDAAKRHKMNIPMLDQ 192

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BLAST of mRNA_L-digitata_M_contig99685.2.1 vs. uniprot
Match: A0A356TQ99_9DELT (Urocanate hydratase (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A356TQ99_9DELT)

HSP 1 Score: 163 bits (413), Expect = 8.890e-49
Identity = 75/94 (79.79%), Postives = 84/94 (89.36%), Query Frame = 0

Query:    1 MKDGSDAVADWPILNAMINAVNGASWVSFHHGGGVGIGYSLHAGMVIVADGTEKAAARLQRVLTSDPGMGVIRHVDAGYDEAVDCATERAVHVP 94
            MKDGSDA+ADWPILNA+INA  GA+W+S HHGGGVGIGYS+HAGMVIVADGTE A  RL+RVLTSDPGMGVIRH DAGYDEA+ CA ++ VHVP
Sbjct:  139 MKDGSDAIADWPILNALINASGGATWISVHHGGGVGIGYSIHAGMVIVADGTEAADKRLERVLTSDPGMGVIRHADAGYDEAIACAKDKGVHVP 232

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BLAST of mRNA_L-digitata_M_contig99685.2.1 vs. uniprot
Match: UPI001BB31BED (urocanate hydratase n=1 Tax=Bacillus paramobilis TaxID=2817477 RepID=UPI001BB31BED)

HSP 1 Score: 164 bits (415), Expect = 3.540e-48
Identity = 77/94 (81.91%), Postives = 87/94 (92.55%), Query Frame = 0

Query:    1 MKDGSDAVADWPILNAMINAVNGASWVSFHHGGGVGIGYSLHAGMVIVADGTEKAAARLQRVLTSDPGMGVIRHVDAGYDEAVDCATERAVHVP 94
            MKDGSDAVADWPILNA+IN+VNGASWVS HHGGGVG+GYSLHAGMVIVADGTE AA R++RVLTSDPGMGV+RHVDAGYD AV+ A E+ V++P
Sbjct:  215 MKDGSDAVADWPILNALINSVNGASWVSVHHGGGVGMGYSLHAGMVIVADGTEAAAKRIERVLTSDPGMGVVRHVDAGYDLAVETAKEKGVNIP 308

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BLAST of mRNA_L-digitata_M_contig99685.2.1 vs. uniprot
Match: A0A534W5G6_9DELT (Urocanate hydratase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534W5G6_9DELT)

HSP 1 Score: 169 bits (427), Expect = 7.690e-48
Identity = 77/98 (78.57%), Postives = 87/98 (88.78%), Query Frame = 0

Query:    1 MKDGSDAVADWPILNAMINAVNGASWVSFHHGGGVGIGYSLHAGMVIVADGTEKAAARLQRVLTSDPGMGVIRHVDAGYDEAVDCATERAVHVPGLNR 98
            MKDGSDA+ADWPILNA++NAVNGASWVSFHHGGGVGIGYSLHAG VIVADGT+ AA RL+RVLTSDP MG++RH DAGY+EA+  A ER V +PGL R
Sbjct:  454 MKDGSDAIADWPILNALVNAVNGASWVSFHHGGGVGIGYSLHAGQVIVADGTDAAARRLERVLTSDPAMGILRHADAGYEEAIQVARERGVQIPGLTR 551

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BLAST of mRNA_L-digitata_M_contig99685.2.1 vs. uniprot
Match: A0A534Y993_9DELT (Urocanate hydratase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534Y993_9DELT)

HSP 1 Score: 169 bits (427), Expect = 8.040e-48
Identity = 77/98 (78.57%), Postives = 87/98 (88.78%), Query Frame = 0

Query:    1 MKDGSDAVADWPILNAMINAVNGASWVSFHHGGGVGIGYSLHAGMVIVADGTEKAAARLQRVLTSDPGMGVIRHVDAGYDEAVDCATERAVHVPGLNR 98
            MKDGSDA+ADWPILNA++NAVNGASWVSFHHGGGVG+GYSLHAG VIVADGTE AA RL+RVLTSDP MG++RH DAGY+EA+  A ER V +PGL R
Sbjct:  454 MKDGSDAIADWPILNALVNAVNGASWVSFHHGGGVGMGYSLHAGQVIVADGTEAAARRLERVLTSDPAMGILRHADAGYEEAIQVARERGVQIPGLTR 551

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BLAST of mRNA_L-digitata_M_contig99685.2.1 vs. uniprot
Match: UPI001ADCD25C (urocanate hydratase n=1 Tax=Bacillus sp. 165 TaxID=1529117 RepID=UPI001ADCD25C)

HSP 1 Score: 168 bits (426), Expect = 1.090e-47
Identity = 79/97 (81.44%), Postives = 88/97 (90.72%), Query Frame = 0

Query:    1 MKDGSDAVADWPILNAMINAVNGASWVSFHHGGGVGIGYSLHAGMVIVADGTEKAAARLQRVLTSDPGMGVIRHVDAGYDEAVDCATERAVHVPGLN 97
            MKDGSDAVADWPILNA+IN VNGASWVS HHGGGVG+GYSLH+GMVIVADGTEKAA RL+RVLTSDPGMGV+RHVDAGYD AV  A E+ VH+P ++
Sbjct:  456 MKDGSDAVADWPILNALINGVNGASWVSLHHGGGVGMGYSLHSGMVIVADGTEKAAKRLERVLTSDPGMGVVRHVDAGYDLAVQTAKEKGVHIPMMD 552

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BLAST of mRNA_L-digitata_M_contig99685.2.1 vs. uniprot
Match: A0A8J3MRE8_9CHLR (Urocanase_C domain-containing protein n=2 Tax=Ktedonospora formicarum TaxID=2778364 RepID=A0A8J3MRE8_9CHLR)

HSP 1 Score: 155 bits (393), Expect = 1.450e-47
Identity = 70/97 (72.16%), Postives = 85/97 (87.63%), Query Frame = 0

Query:    1 MKDGSDAVADWPILNAMINAVNGASWVSFHHGGGVGIGYSLHAGMVIVADGTEKAAARLQRVLTSDPGMGVIRHVDAGYDEAVDCATERAVHVPGLN 97
            MKDGSDA+ADWP+LNA++N  +GA+WVS HHGGGVGIGYS+HAG VIVADGT +AA RL+RVLT+DPG GV+RHVDAGYDEA+ CA +R V +P L+
Sbjct:    1 MKDGSDAIADWPLLNALLNTASGATWVSLHHGGGVGIGYSMHAGQVIVADGTPEAAERLKRVLTNDPGTGVMRHVDAGYDEAIACARDRNVQIPMLD 97

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BLAST of mRNA_L-digitata_M_contig99685.2.1 vs. uniprot
Match: A0A2M6ZYW9_9DELT (Urocanate hydratase (Fragment) n=1 Tax=Deltaproteobacteria bacterium CG07_land_8_20_14_0_80_38_7 TaxID=1973971 RepID=A0A2M6ZYW9_9DELT)

HSP 1 Score: 162 bits (411), Expect = 1.600e-47
Identity = 76/96 (79.17%), Postives = 86/96 (89.58%), Query Frame = 0

Query:    1 MKDGSDAVADWPILNAMINAVNGASWVSFHHGGGVGIGYSLHAGMVIVADGTEKAAARLQRVLTSDPGMGVIRHVDAGYDEAVDCATERAVHVPGL 96
            MKDG+DAVADWPILNA+INAVNGASWVSFHHGGGVG+GYSLHAG VIVADGT+ AA R++RVL SDPGMGVIRH DAGY EA+D A ++ V +PGL
Sbjct:  219 MKDGTDAVADWPILNALINAVNGASWVSFHHGGGVGMGYSLHAGQVIVADGTDAAAKRIERVLRSDPGMGVIRHADAGYVEAIDVAKKQGVKIPGL 314

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BLAST of mRNA_L-digitata_M_contig99685.2.1 vs. uniprot
Match: A0A4Y6PU42_9DELT (Urocanate hydratase n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PU42_9DELT)

HSP 1 Score: 167 bits (424), Expect = 2.130e-47
Identity = 77/97 (79.38%), Postives = 88/97 (90.72%), Query Frame = 0

Query:    1 MKDGSDAVADWPILNAMINAVNGASWVSFHHGGGVGIGYSLHAGMVIVADGTEKAAARLQRVLTSDPGMGVIRHVDAGYDEAVDCATERAVHVPGLN 97
            MKDG+DAVADWPILNAM+NA+ GASWVSFHHGGGVG+GYSLHAG VIVADGT+ AAARL+RVLT+DPGMGVIRH DAGY++A+DCA E  V VP L+
Sbjct:  455 MKDGTDAVADWPILNAMLNAIGGASWVSFHHGGGVGMGYSLHAGQVIVADGTDAAAARLERVLTTDPGMGVIRHADAGYEKAIDCAKEHGVRVPHLD 551

The following BLAST results are available for this feature:

BLAST of mRNA_L-digitata_M_contig99685.2.1 vs. uniprot

BLAST of mRNA_L-digitata_M_contig99685.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A4U2NQA1_BACCE	2.100e-50	81.91	Urocanate hydratase (Fragment) n=1 Tax=Bacillus ce...	[more]
A0A061PFY0_9BACL	5.000e-49	76.53	Urocanate hydratase n=1 Tax=Geomicrobium sp. JCM 1...	[more]
A0A356TQ99_9DELT	8.890e-49	79.79	Urocanate hydratase (Fragment) n=1 Tax=Myxococcale...	[more]
UPI001BB31BED	3.540e-48	81.91	urocanate hydratase n=1 Tax=Bacillus paramobilis T...	[more]
A0A534W5G6_9DELT	7.690e-48	78.57	Urocanate hydratase n=1 Tax=Deltaproteobacteria ba...	[more]
A0A534Y993_9DELT	8.040e-48	78.57	Urocanate hydratase n=1 Tax=Deltaproteobacteria ba...	[more]
UPI001ADCD25C	1.090e-47	81.44	urocanate hydratase n=1 Tax=Bacillus sp. 165 TaxID...	[more]
A0A8J3MRE8_9CHLR	1.450e-47	72.16	Urocanase_C domain-containing protein n=2 Tax=Kted...	[more]
A0A2M6ZYW9_9DELT	1.600e-47	79.17	Urocanate hydratase (Fragment) n=1 Tax=Deltaproteo...	[more]
A0A4Y6PU42_9DELT	2.130e-47	79.38	Urocanate hydratase n=1 Tax=Persicimonas caeni Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035401	Urocanase, C-terminal domain	PFAM	PF17392	Urocanase_C	coord: 1..87 e-value: 2.8E-38 score: 131.3
None	No IPR available	GENE3D	3.40.1770.10	Urocanase superfamily	coord: 1..97 e-value: 7.5E-49 score: 168.4
None	No IPR available	PANTHER	PTHR12216:SF4	UROCANATE HYDRATASE	coord: 1..97
IPR023637	Urocanase	PANTHER	PTHR12216	UROCANATE HYDRATASE	coord: 1..97
IPR036190	Urocanase superfamily	SUPERFAMILY	111326	Urocanase	coord: 1..96

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-digitata_M_contig99685	contig	L-digitata_M_contig99685:644..940 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-digitata_M_contig99685.2.1	mRNA_L-digitata_M_contig99685.2.1	Laminaria digitata LdigPH10_18mv male	mRNA	L-digitata_M_contig99685 644..949 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-digitata_M_contig99685.2.1 ID=prot_L-digitata_M_contig99685.2.1|Name=mRNA_L-digitata_M_contig99685.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=99bp
MKDGSDAVADWPILNAMINAVNGASWVSFHHGGGVGIGYSLHAGMVIVAD
GTEKAAARLQRVLTSDPGMGVIRHVDAGYDEAVDCATERAVHVPGLNR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035401	Urocanase_C
IPR023637	Urocanase
IPR036190	Urocanase_sf