prot_L-digitata_M_contig99629.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99629.1.1
Unique Nameprot_L-digitata_M_contig99629.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length36
Homology
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BLAST of mRNA_L-digitata_M_contig99629.1.1 vs. uniprot
Match: A0A6H5L357_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L357_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 9.370e-11
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0 
Query:    1 LPKRYWFATKDGLFNLFRDANSGPGAPNGPRRKGEG 36
            +P  YWFA KDGL+NLFRD +SGPGAPNG RRKGEG
Sbjct:  216 VPLSYWFAMKDGLYNLFRDPDSGPGAPNGGRRKGEG 251
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BLAST of mRNA_L-digitata_M_contig99629.1.1 vs. uniprot
Match: A0A7R9ZFF3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZFF3_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 3.230e-5
Identity = 19/29 (65.52%), Postives = 25/29 (86.21%), Query Frame = 0 
Query:    1 LPKRYWFATKDGLFNLFRDANSGPGAPNG 29
            +P RY FA+KDG++NLFRD ++GPGAP G
Sbjct:   10 VPLRYLFASKDGIYNLFRDPDAGPGAPKG 38
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99629.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L357_9PHAE9.370e-1177.78Helicase ATP-binding domain-containing protein n=1... [more]
A0A7R9ZFF3_9STRA3.230e-565.52Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019774Aromatic amino acid hydroxylase, C-terminalPROSITEPS51410BH4_AAA_HYDROXYL_2coord: 1..36
score: 8.848249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99629contigL-digitata_M_contig99629:53..160 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99629.1.1mRNA_L-digitata_M_contig99629.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99629 53..160 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99629.1.1 ID=prot_L-digitata_M_contig99629.1.1|Name=mRNA_L-digitata_M_contig99629.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=36bp
LPKRYWFATKDGLFNLFRDANSGPGAPNGPRRKGEG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019774Aromatic-AA_hydroxylase_C