prot_L-digitata_M_contig996.8.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig996.8.1
Unique Nameprot_L-digitata_M_contig996.8.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length322
Homology
BLAST of mRNA_L-digitata_M_contig996.8.1 vs. uniprot
Match: A0A6H5JXD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXD5_9PHAE)

HSP 1 Score: 325 bits (832), Expect = 6.000e-107
Identity = 176/307 (57.33%), Postives = 221/307 (71.99%), Query Frame = 0
Query:   24 AAREWSS------GLAGAAADEQGLPSAFPWREAPDNR-VQGLLNRALYASMQNSHRKILGLVENVHG--DEAFLPSAEMAFVQVAAGVFQMRASQVVALLIEEGAGRQEEDSQGTNDRETARGGAASSGLPEDDIVDPRDVMHEDLATFYLEAAAATKVSRCTPFYRLHRICNSKISNVNIFWGARRGDLPKPGEIVEFMGTAVATESVFKDLEAVIRARYFRDRDMLNKGSLSSLRKSTVQVDVDVLCSETFFVVDDRTEQVVQGSKAVGSRTHRLRLECCPILNRDFRWTAVDLDVWMKGNTFW 321
            A R WSS      G   +AA+  GLPSAFPWREAPDNR V+GL+ RA+Y+ MQ+ HR+ L     +    D+AFL +AEMAFVQVAAGVFQM A QV+A L + G G + + S  + DR   R G     +PE  +VDPRDVMH+DLA FY++AA A KVSR TPFYRLH + + +ISNVN+ WGA+RGDLP+ GE +E  G+    +SV +D++A+ R R  +DRD+L+K  LSS+RK+TVQVDVD+ C+ETFFV DDRTE++VQGSKA   R HRLRLE  P L RDF+W+ VDLD WMKGNTFW
Sbjct:   48 ATRGWSSSGFATPGGDASAAEVPGLPSAFPWREAPDNRGVRGLVERAMYSVMQHQHRRFLRAATKLDDADDDAFLRAAEMAFVQVAAGVFQMPAHQVIAPLAD-GEGDEGKSSSESGDRGRRRDGLPVWDIPEGALVDPRDVMHKDLADFYVQAAVAAKVSRSTPFYRLHGLRSCEISNVNVLWGAQRGDLPEEGETIEIWGSKYVLKSVLEDIKAISRYRVSKDRDVLDK-PLSSIRKTTVQVDVDIGCTETFFVSDDRTEEIVQGSKAFAVRKHRLRLESSPFLKRDFQWSVVDLDDWMKGNTFW 352          
BLAST of mRNA_L-digitata_M_contig996.8.1 vs. uniprot
Match: D8LFT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT8_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.430e-60
Identity = 135/316 (42.72%), Postives = 176/316 (55.70%), Query Frame = 0
Query:   26 REWSS-------GLAGAAADEQGLPSAFPWREAPDNR-VQGLLNRALYASMQNSHRKILGLVENVHG--DEAFLPSAEMAFVQVAAGVFQMRASQVVALLIEEGAGRQEEDSQGTNDRETARG----------GAASSGLPEDDIVDPRDVMHEDLATFYLEAAAATKVSRCTPFYRLHRICNSKISNVNIFWGARRGDLPKPGEIVEFMGTAVATESVFKDLEAVIRARYFRDRDMLNKGSLSSLRKSTVQVDVDVLCSETFFVVDDRTEQVVQGSKAVGSRTHRLRLECCPILNRDFRWTAVDLDVWMKGNTFW 321
            R WSS       G AGAA +  GLPSAFPWREA DNR ++GL+ RA+Y+ MQ+ HR+ L     +    D+AFL +     V+         AS        +  GR+ +   G       +           G     +PE  +VDPRDVMH+DLA FY++AA A KVSR TPFYRLH   + +ISNVN+ WGA+RGDLP+ GE +E  G+    +SV +D++A+ R R  +DR  L+K  LSS+RK+TVQVDVD+ C+ETFFV D+RTE+V                              VDLD WMKGNTFW
Sbjct:   56 RGWSSSGFATPGGDAGAA-EMPGLPSAFPWREATDNRGMRGLVERAMYSVMQHQHRRFLRAATKLDDADDDAFLATCRRNGVRPGGRRGLPDASASGYRTPHQRGGRRRKGVFGIGGPREEKACVYPTLYPGDGLPVWDIPEGALVDPRDVMHKDLAEFYVQAAVAAKVSRSTPFYRLHGFTSCEISNVNVLWGAQRGDLPEEGETIEIWGSKYVLKSVLEDIKAISRYRVNKDRAGLDK-PLSSIRKTTVQVDVDIGCTETFFVSDNRTEEV------------------------------VDLDNWMKGNTFW 339          
BLAST of mRNA_L-digitata_M_contig996.8.1 vs. uniprot
Match: A0A836C9B7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B7_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 3.110e-18
Identity = 75/210 (35.71%), Postives = 99/210 (47.14%), Query Frame = 0
Query:  132 DRETARGGAASSGLPEDDIVDPRDVMHEDLATFYLEAAAATKVSRCTPFYRLHRICNSKISNVNIFWGARRGDL--PK--PGEIVEFMGTAVATESVFKDL-EAVIRARYFRDRDMLNKGSLSSLRKSTVQVDVDVLCSETFFVVDDRTEQVVQGSKAVGSRTHRLRLECCP-------------ILNR-----DFRWTAVDLDVWMKGN 318
            D E A G +A+     D   D R VM E LA FY  AAA   +S   P Y LH I ++ +    +  GA RGD   P+  P E+VE   + VA       L E  ++A    D DM       S++  TV VDV  +C ETFFV D  T+ +VQGS A+ +R H +RLE                +L R     D  W  +D+D W+ GN
Sbjct:  119 DAEKAPGASAADAGGADAEFDLRAVMEEKLADFYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPHELVEMWRSMVALARRSATLTETEMKAAI--DEDMQRFMRRESVQ--TVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHSIREATLESVLKRELDWSDVDWQVIDIDGWLGGN 324          
BLAST of mRNA_L-digitata_M_contig996.8.1 vs. uniprot
Match: A0A835YZ99_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ99_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.310e-13
Identity = 64/202 (31.68%), Postives = 89/202 (44.06%), Query Frame = 0
Query:  151 VDPRDVMHEDLATFYLEAAAATKVSRCTPFYRLHRICNSKISNVNIFWGARRGDLPKPGEIVEFMGTAVATESVFKDLEAVIRARYFR-----------------DRDMLNKGSLSSLRKSTVQVDVDVLCSETFFVVDDRTEQVVQGSKAVGSRTHRLRLECC---PILNR--------------DFRWTAVDLDVWMKGN 318
            +D R VM E+LA FY  AAA        P Y LH I +  I    +  GA RGD   P  I E  G  V   ++      +   R  R                  +++L++  +S  R  TV VD+ ++C ETFFV    T  +VQGS AV +RTH++RLE     P+ +               D  W  +D+D W+ GN
Sbjct:  361 LDLRAVMEENLADFYASAAAQASARGLAPCYALHDIVDVTIVGTGMVEGAVRGDAFDP-RIHEDSGMKVFLRNMGNAFRQIYPTRRRRGGPGPVSLSVAEQEAIIQKEVLDR-MMSRQRIRTVHVDLQLVCRETFFVRKTATGAIVQGSDAVETRTHQVRLESTQRRPVPSAFDLAALEAASKVWSDINWQVIDIDGWLDGN 560          
BLAST of mRNA_L-digitata_M_contig996.8.1 vs. uniprot
Match: A0A836CA16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA16_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.740e-13
Identity = 61/204 (29.90%), Postives = 87/204 (42.65%), Query Frame = 0
Query:  139 GAASSGLPEDDIVDPRDVMHEDLATFYLEAAAATKVSRCTPFYRLHRICNSKISNVNIFWGARRGDLPKPGEIVEFMGTAVATESVFKDLEAVIRARYFRDRDMLNKGSLSSLRKSTVQVDVDVLCSETFFVVDDRTEQVVQGSKAVGSRTHRLRLECCPILN---------------------RDFRWTAVDLDVWMKGNTFW 321
            GA S GL      DP  VM   LA F+  AAA   +S   P Y LH + ++    V    G  RGD                T    + L  +++    +  D +     S+ R  T+ VDVD++C +TFFV +  T+ +VQGS AV +RTHR+RLE                            D  W  +D+D W+ GN+ +
Sbjct:  567 GAGSGGL------DPHAVMEPKLADFFAAAAAQAALSGLAPCYVLHGVVDAAAVRVTSVRGLARGD----------------TYDAARGLPPLVQLWRKKGGDDI----FSAERIRTLHVDVDIVCRDTFFVRETATDAIVQGSDAVQTRTHRVRLETTQRRTYVPEDFDMERPWEFKKEWDVWTDLDWQVIDIDDWLDGNSMY 744          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig996.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JXD5_9PHAE6.000e-10757.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFT8_ECTSI1.430e-6042.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C9B7_9STRA3.110e-1835.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZ99_9STRA1.310e-1331.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CA16_9STRA2.740e-1329.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig996contigL-digitata_M_contig996:15493..18762 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig996.8.1mRNA_L-digitata_M_contig996.8.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig996 14628..19070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig996.8.1 ID=prot_L-digitata_M_contig996.8.1|Name=mRNA_L-digitata_M_contig996.8.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=322bp
MRATTTAVARFSGPMRTRLLARAAAREWSSGLAGAAADEQGLPSAFPWRE
APDNRVQGLLNRALYASMQNSHRKILGLVENVHGDEAFLPSAEMAFVQVA
AGVFQMRASQVVALLIEEGAGRQEEDSQGTNDRETARGGAASSGLPEDDI
VDPRDVMHEDLATFYLEAAAATKVSRCTPFYRLHRICNSKISNVNIFWGA
RRGDLPKPGEIVEFMGTAVATESVFKDLEAVIRARYFRDRDMLNKGSLSS
LRKSTVQVDVDVLCSETFFVVDDRTEQVVQGSKAVGSRTHRLRLECCPIL
NRDFRWTAVDLDVWMKGNTFW*
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