prot_L-digitata_M_contig9959.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9959.1.1
Unique Nameprot_L-digitata_M_contig9959.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length158
Homology
BLAST of mRNA_L-digitata_M_contig9959.1.1 vs. uniprot
Match: D8LCC0_ECTSI (Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC0_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 3.410e-47
Identity = 80/117 (68.38%), Postives = 94/117 (80.34%), Query Frame = 0
Query:   13 YVMTTPDSRFEIFGYSIVHVNCINNFSHIHEIGHNMGANHNKENSNSAHEYAFAQRYCDGDAPYRTIMAYESGCSNAPRVNMFSNPELEYAGKSQGTATADNARVIREAVSTVANFR 129
            YVM TP + FE FGYSIVH +C++N SHIHEIGHNMGANHN+E+++S H+YA AQRYC GD PYRTIMAYE+GC  APRV MFS  +  YA KS GT + DNARVI E++STV NFR
Sbjct:  302 YVMATPRAAFEGFGYSIVHTHCLDNLSHIHEIGHNMGANHNREDTSSEHDYAHAQRYCTGDTPYRTIMAYETGCLQAPRVAMFSTQDKTYASKSLGTTSTDNARVIEESLSTVVNFR 418          
BLAST of mRNA_L-digitata_M_contig9959.1.1 vs. uniprot
Match: D8LC56_ECTSI (Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC56_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 2.510e-41
Identity = 71/128 (55.47%), Postives = 93/128 (72.66%), Query Frame = 0
Query:    1 MYGNYDSSCGLGYVMTTPDSRFEIFGYSIVHVNCINNFSHIHEIGHNMGANHNKEN---SNSAHEYAFAQRYCDGDAPYRTIMAYESGCSNAPRVNMFSNPELEYAGKSQGTATADNARVIREAVSTV 125
            + G Y ++CG+G+ M +P S F  +GYS+VH NC++NFSHIHE+GHN GANHNKEN   S+    Y +A R C+    +RTIMAY SGC + PRVN+FSNP+L YA + QGT  ADNARV+ EA+S +
Sbjct:  313 LIGYYLNTCGVGFTMGSPSSGFAQYGYSVVHTNCLSNFSHIHELGHNFGANHNKENAGGSDGVDAYNYAYRNCEVGTKFRTIMAYSSGCPSTPRVNVFSNPDLTYANQRQGTENADNARVLNEAMSEI 440          
BLAST of mRNA_L-digitata_M_contig9959.1.1 vs. uniprot
Match: A0A6H5JDN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN0_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 3.910e-37
Identity = 72/143 (50.35%), Postives = 91/143 (63.64%), Query Frame = 0
Query:    1 MYGNYDSSCGLG----------------YVMTTPDSRFEIFGYSIVHVNCINNFSHIHEIGHNMGANHNKEN---SNSAHEYAFAQRYCDGDAPYRTIMAYESGCSNAPRVNMFSNPELEYAGKSQGTATADNARVIREAVST 124
            + G Y ++CG+G                + M TP S F  +GYS+VH NC++NFSHIHE+GHN GANHNKEN   S     Y +A R CD    +RTIMAY SGC + PRVN+FSNP+L YA + QGT  A+NARV+ EA+ T
Sbjct:  289 LIGYYLNTCGVGSKVSSFFALYPARTHRFTMGTPSSGFAQYGYSVVHTNCLSNFSHIHELGHNFGANHNKENVGGSGGVDAYNYAYRNCDVGTKFRTIMAYSSGCPSTPRVNVFSNPDLTYANQRQGTENANNARVLNEAMVT 431          
BLAST of mRNA_L-digitata_M_contig9959.1.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 4.800e-31
Identity = 66/139 (47.48%), Postives = 85/139 (61.15%), Query Frame = 0
Query:    1 MYGNYDSSCGLGYVMTTPDSRFEIFGYSIVHVNCINNFSHIHEIGHNMGANHNKENSNSAHEYAFAQRYCDGDAPYRTIMAY-ESGCSN---------APRVNMFSNPELEYAGKSQGTATADNARVIREAVSTVANFR 129
            + G +  +CGLGY+          FG+S+V  NC +NFSH HEI HNMG  H+++NS +  EY    RYC G  PYRTIM+Y ++GC            P+VN FSNPE+ Y  K  GTATADNAR I E++  V+NFR
Sbjct:  450 LVGYFPGTCGLGYIFNGNAE----FGFSLVGSNCFDNFSHTHEIAHNMGCYHDRDNSETQDEYRHGYRYCTGSDPYRTIMSYYQNGCGGDPTPEADPIVPQVNYFSNPEVTYLNKPTGTATADNARCIEESMVAVSNFR 584          
BLAST of mRNA_L-digitata_M_contig9959.1.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 1.620e-30
Identity = 65/139 (46.76%), Postives = 84/139 (60.43%), Query Frame = 0
Query:    1 MYGNYDSSCGLGYVMTTPDSRFEIFGYSIVHVNCINNFSHIHEIGHNMGANHNKENSNSAHEYAFAQRYCDGDAPYRTIMAY-ESGCSN---------APRVNMFSNPELEYAGKSQGTATADNARVIREAVSTVANFR 129
            + G +  +CGLGY+     +    FG+S+V  NC +NFSH HEI HNMG  H+K NS++ H Y    RYC+G  PYRTIM+Y  +GC            PRVN FSNP + Y  KS GTA ADNAR I +++  V+ FR
Sbjct:  270 LVGYFPGTCGLGYIFNGDAA----FGFSLVDSNCFDNFSHTHEIAHNMGCYHDKNNSDTQHAYRHGWRYCEGADPYRTIMSYYHNGCGGDPTSEDDPIVPRVNYFSNPNVTYLNKSTGTAAADNARCIEDSMVAVSEFR 404          
BLAST of mRNA_L-digitata_M_contig9959.1.1 vs. uniprot
Match: A0A836CH47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH47_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.800e-25
Identity = 60/125 (48.00%), Postives = 78/125 (62.40%), Query Frame = 0
Query:    9 CGLGYVMTTPDSRFEIFGYSIVHVNCINNFSHIHEIGHNMGANHNKENSNSAHE--YAFAQRYCDG--DAPY-RTIMAYESGCSNAPRVNMFSNPELEYAGKSQGTATADNARVIREAVSTVANF 128
            CG G +M +P S F  + YS+V+  C   FSHIHEIGHNMGA H+  N++++    YA   RYC G  D PY R++M+Y   C+ A RV  FS+P + Y G+  G   ADNARV+RE    VANF
Sbjct:  208 CGFGSLMQSPSSSFREYAYSVVYGGCFAQFSHIHEIGHNMGARHDVGNTDASATWPYAMGYRYCSGEVDPPYFRSVMSYS--CTGAMRVPYFSSPTVYYQGRQTGMQGADNARVLRETKYIVANF 330          
BLAST of mRNA_L-digitata_M_contig9959.1.1 vs. uniprot
Match: A0A836CMI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMI7_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.800e-25
Identity = 60/127 (47.24%), Postives = 82/127 (64.57%), Query Frame = 0
Query:    9 CGLGYVMTTPDSRFEIFGYSIVHVNCINNFSHIHEIGHNMGANHNKENSNSAH--EYAFAQRYC-DGDAP---YRTIMAYESGCSNAPRVNMFSNPELEYAGKSQGTATADNARVIREAVSTVANFR 129
            CG G ++ +  S F  +G+S+V+ +CI ++SHIHEIGHNMG  HN ENS  A    Y    RYC DG +    YR++M+Y   C+ A RV  FS+P++EY G++ G  TADN RV+ +   TVANFR
Sbjct:  340 CGYGNLLYSASSSFAPYGFSVVYSDCIVSYSHIHEIGHNMGCQHNAENSGDATMWSYGVGYRYCNDGVSKSPYYRSVMSY--ACTGATRVPYFSSPDVEYQGRTTGLDTADNVRVLEQTHYTVANFR 464          
BLAST of mRNA_L-digitata_M_contig9959.1.1 vs. uniprot
Match: A0A835YK21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK21_9STRA)

HSP 1 Score: 109 bits (273), Expect = 7.260e-25
Identity = 67/135 (49.63%), Postives = 86/135 (63.70%), Query Frame = 0
Query:    9 CGLGYVMTTPDSRFEIFGYSIVHVNCINNFSHIHEIGHNMGANHNKENSN--SAHEYAFAQRYC-DG--DAPY-RTIMAYESGCSNAPRVNMFSNPELEYAGKSQGTA-TADNARVIREAVSTVANFRTAVATTT 136
            CG G ++++  S F  +GYS+V+ +CI ++SHIHEIGHNMG  HN ENS   +   Y    RYC DG   APY RTIM+Y   C+ A RV  FS+P + Y G + GTA TADN RV+ +   TVANFR   +T T
Sbjct:  429 CGYGNLLSSASSSFASYGYSVVYSDCIASYSHIHEIGHNMGCQHNVENSGQTTVWPYGDGYRYCNDGVTQAPYFRTIMSY--ACTGATRVPYFSSPNIYYQGVATGTAATADNLRVLLQTKYTVANFRQGGSTPT 561          
BLAST of mRNA_L-digitata_M_contig9959.1.1 vs. uniprot
Match: A0A836C7N3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7N3_9STRA)

HSP 1 Score: 104 bits (259), Expect = 4.980e-23
Identity = 56/133 (42.11%), Postives = 83/133 (62.41%), Query Frame = 0
Query:    2 YGNYDSSCGLGYVMTTPDSRFEIFGYSIVHVNCINNFSHIHEIGHNMGANHNKENSNSAHEYAFAQ--RYCDGDAP---YRTIMAYESGCSNAPRVNMFSNPELEYAGKSQGTATADNARVIREAVSTVANFR 129
            YG Y      G +MT+  S F  + +S+V+  C +++SHIHE+GHNMGA H+  NS    ++++ +  RYC G+     +R++M+Y   C  APRV  FS+P + Y G++ GTA ADN RV++    TVANFR
Sbjct:  491 YGRY------GNIMTSTSSDFAPWAHSVVYNGCYSSYSHIHEMGHNMGAQHDAANSQDVTDWSYGEGYRYCSGETSQPWFRSVMSYN--CGAAPRVPYFSSPNVYYKGRATGTAGADNVRVLKANRYTVANFR 615          
BLAST of mRNA_L-digitata_M_contig9959.1.1 vs. uniprot
Match: A0A835Z926_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z926_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 5.410e-21
Identity = 53/118 (44.92%), Postives = 69/118 (58.47%), Query Frame = 0
Query:    9 CGLGYVMTTPDSRFEIFGYSIVHVNCINNFSHIHEIGHNMGANHNKENSNSAHE--YAFAQRYCD---GDAPY-RTIMAYESGCSNAPRVNMFSNPELEYAGKSQGTATADNARVIRE 120
            CG G +M T  S F  + +S++H  C    SH+HEIGHN+GA H+  +S ++    YA   RYCD   G  PY RT+M+Y   C  A RV  FS+P   Y G   G A ADNARV+R+
Sbjct:  116 CGYGNLMDTASSSFGKYAHSVIHGGCYAQLSHVHEIGHNLGARHDAADSTASTTWPYALGWRYCDDGKGAGPYFRTVMSYS--CPGAARVPYFSSPNKFYQGLPTGNAGADNARVLRQ 231          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9959.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCC0_ECTSI3.410e-4768.38Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarp... [more]
D8LC56_ECTSI2.510e-4155.47Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarp... [more]
A0A6H5JDN0_9PHAE3.910e-3750.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF50_9PHAE4.800e-3147.48LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
A0A6H5JRC1_9PHAE1.620e-3046.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CH47_9STRA1.800e-2548.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CMI7_9STRA2.800e-2547.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YK21_9STRA7.260e-2549.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C7N3_9STRA4.980e-2342.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z926_9STRA5.410e-2144.92Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13688Reprolysin_5coord: 37..96
e-value: 1.5E-8
score: 35.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..158
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 6..101
IPR024079Metallopeptidase, catalytic domain superfamilyGENE3D3.40.390.10Collagenase (Catalytic Domain)coord: 2..103
e-value: 2.5E-5
score: 26.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9959contigL-digitata_M_contig9959:715..4804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9959.1.1mRNA_L-digitata_M_contig9959.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9959 715..4811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9959.1.1 ID=prot_L-digitata_M_contig9959.1.1|Name=mRNA_L-digitata_M_contig9959.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=158bp
MYGNYDSSCGLGYVMTTPDSRFEIFGYSIVHVNCINNFSHIHEIGHNMGA
NHNKENSNSAHEYAFAQRYCDGDAPYRTIMAYESGCSNAPRVNMFSNPEL
EYAGKSQGTATADNARVIREAVSTVANFRTAVATTTDQGSQTTGQWSRTG
QGSQTTFD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024079MetalloPept_cat_dom_sf