prot_L-digitata_M_contig99576.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99576.1.1
Unique Nameprot_L-digitata_M_contig99576.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length54
Homology
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BLAST of mRNA_L-digitata_M_contig99576.1.1 vs. uniprot
Match: I1XJR1_METNJ (DNA-binding response regulator n=8 Tax=root TaxID=1 RepID=I1XJR1_METNJ)

HSP 1 Score: 107 bits (268), Expect = 8.860e-28
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 
Query:    1 MRLLLVEDEVKTGDYLQKGLSEAGFQVNLVRNGLDGHHLAMTEAFDLIVLDVML 54
            MRLLLVEDEVKTGDYLQKGLSEAGFQVNLVRNGLDGHHLAMTEAFDLIVLDVML
Sbjct:    1 MRLLLVEDEVKTGDYLQKGLSEAGFQVNLVRNGLDGHHLAMTEAFDLIVLDVML 54
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BLAST of mRNA_L-digitata_M_contig99576.1.1 vs. uniprot
Match: A0A0U2PIW3_9ALTE (Two-component system response regulator n=1 Tax=Lacimicrobium alkaliphilum TaxID=1526571 RepID=A0A0U2PIW3_9ALTE)

HSP 1 Score: 101 bits (251), Expect = 3.260e-25
Identity = 48/54 (88.89%), Postives = 54/54 (100.00%), Query Frame = 0 
Query:    1 MRLLLVEDEVKTGDYLQKGLSEAGFQVNLVRNGLDGHHLAMTEAFDLIVLDVML 54
            MRLLLVEDEVKTGDYLQ+GL+EAGFQV+L+RNGLDGHHLAMTE+FDLI+LDVML
Sbjct:    1 MRLLLVEDEVKTGDYLQQGLAEAGFQVSLIRNGLDGHHLAMTESFDLIILDVML 54
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BLAST of mRNA_L-digitata_M_contig99576.1.1 vs. uniprot
Match: M5DNI1_9GAMM (Heavy metal response regulator n=12 Tax=Proteobacteria TaxID=1224 RepID=M5DNI1_9GAMM)

HSP 1 Score: 99.8 bits (247), Expect = 1.240e-24
Identity = 48/54 (88.89%), Postives = 53/54 (98.15%), Query Frame = 0 
Query:    1 MRLLLVEDEVKTGDYLQKGLSEAGFQVNLVRNGLDGHHLAMTEAFDLIVLDVML 54
            MRLLLVEDE+KTGDYL++GLSEAGFQV+L RNGLDGHHLAMTE+FDLIVLDVML
Sbjct:    1 MRLLLVEDEIKTGDYLRQGLSEAGFQVSLARNGLDGHHLAMTESFDLIVLDVML 54
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BLAST of mRNA_L-digitata_M_contig99576.1.1 vs. uniprot
Match: A0A350QKU8_9BACT (DNA-binding response regulator n=1 Tax=Candidatus Azambacteria bacterium TaxID=2053511 RepID=A0A350QKU8_9BACT)

HSP 1 Score: 99.4 bits (246), Expect = 1.670e-24
Identity = 47/54 (87.04%), Postives = 54/54 (100.00%), Query Frame = 0 
Query:    1 MRLLLVEDEVKTGDYLQKGLSEAGFQVNLVRNGLDGHHLAMTEAFDLIVLDVML 54
            MRLL+VEDE+KTGDYL++GL+EAGFQV+LVRNGLDGHHLAMTEAFDLI+LDVML
Sbjct:    1 MRLLIVEDELKTGDYLKQGLTEAGFQVSLVRNGLDGHHLAMTEAFDLIILDVML 54
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BLAST of mRNA_L-digitata_M_contig99576.1.1 vs. uniprot
Match: A0A2E0Z4P4_9GAMM (DNA-binding response regulator n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0Z4P4_9GAMM)

HSP 1 Score: 99.0 bits (245), Expect = 2.310e-24
Identity = 48/54 (88.89%), Postives = 52/54 (96.30%), Query Frame = 0 
Query:    1 MRLLLVEDEVKTGDYLQKGLSEAGFQVNLVRNGLDGHHLAMTEAFDLIVLDVML 54
            MRLL+VEDE+KTGDYLQKGL+EAGF V+L RNGLDGHHLAMTEAFDLIVLDVML
Sbjct:    1 MRLLVVEDEIKTGDYLQKGLTEAGFLVDLARNGLDGHHLAMTEAFDLIVLDVML 54
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BLAST of mRNA_L-digitata_M_contig99576.1.1 vs. uniprot
Match: A0A1E7Q7G3_9GAMM (DNA-binding response regulator n=6 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1E7Q7G3_9GAMM)

HSP 1 Score: 99.0 bits (245), Expect = 2.410e-24
Identity = 47/54 (87.04%), Postives = 53/54 (98.15%), Query Frame = 0 
Query:    1 MRLLLVEDEVKTGDYLQKGLSEAGFQVNLVRNGLDGHHLAMTEAFDLIVLDVML 54
            MRLL+VEDE+KTGDYL++GL+EAGFQV+LVRNGLDGHHLAMTE FDLIVLDVML
Sbjct:    1 MRLLIVEDEIKTGDYLKQGLTEAGFQVSLVRNGLDGHHLAMTEVFDLIVLDVML 54
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BLAST of mRNA_L-digitata_M_contig99576.1.1 vs. uniprot
Match: A0A3N1NWC2_9GAMM (Two-component system copper resistance phosphate regulon response regulator CusR n=2 Tax=Gallaecimonas TaxID=745410 RepID=A0A3N1NWC2_9GAMM)

HSP 1 Score: 97.4 bits (241), Expect = 8.950e-24
Identity = 49/54 (90.74%), Postives = 50/54 (92.59%), Query Frame = 0 
Query:    1 MRLLLVEDEVKTGDYLQKGLSEAGFQVNLVRNGLDGHHLAMTEAFDLIVLDVML 54
            MRLL+VEDE KTGDYLQKGLSEAGFQV L RNGLDGHHLAMTE FDLIVLDVML
Sbjct:    1 MRLLVVEDEHKTGDYLQKGLSEAGFQVALARNGLDGHHLAMTEEFDLIVLDVML 54
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BLAST of mRNA_L-digitata_M_contig99576.1.1 vs. uniprot
Match: UPI000986D415 (heavy metal response regulator transcription factor n=1 Tax=Marinicella sediminis TaxID=1792834 RepID=UPI000986D415)

HSP 1 Score: 97.4 bits (241), Expect = 9.140e-24
Identity = 47/54 (87.04%), Postives = 52/54 (96.30%), Query Frame = 0 
Query:    1 MRLLLVEDEVKTGDYLQKGLSEAGFQVNLVRNGLDGHHLAMTEAFDLIVLDVML 54
            MRLL+VEDEVKTGDYL++GLSEAGF V+LVRNGLDGHHLAMTE FDLI+LDVML
Sbjct:    1 MRLLIVEDEVKTGDYLKQGLSEAGFMVSLVRNGLDGHHLAMTETFDLILLDVML 54
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BLAST of mRNA_L-digitata_M_contig99576.1.1 vs. uniprot
Match: Q21JC1_SACD2 (Heavy metal response regulator n=21 Tax=Gammaproteobacteria TaxID=1236 RepID=Q21JC1_SACD2)

HSP 1 Score: 96.7 bits (239), Expect = 1.780e-23
Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = 0 
Query:    1 MRLLLVEDEVKTGDYLQKGLSEAGFQVNLVRNGLDGHHLAMTEAFDLIVLDVML 54
            MRLL+VEDEVKTGDYLQ+GLSEAGF V L RNGLDGHHLAMTE FDL++LDVML
Sbjct:    1 MRLLVVEDEVKTGDYLQQGLSEAGFMVTLARNGLDGHHLAMTETFDLLILDVML 54
[Close]
BLAST of mRNA_L-digitata_M_contig99576.1.1 vs. uniprot
Match: A0A558HP03_9GAMM (Response regulator n=6 Tax=root TaxID=1 RepID=A0A558HP03_9GAMM)

HSP 1 Score: 96.7 bits (239), Expect = 1.860e-23
Identity = 46/54 (85.19%), Postives = 52/54 (96.30%), Query Frame = 0 
Query:    1 MRLLLVEDEVKTGDYLQKGLSEAGFQVNLVRNGLDGHHLAMTEAFDLIVLDVML 54
            MRLL+VEDEVKTGDYL++GLSEAGFQV+L RNGLDGHHLAMTE FD+I+LDVML
Sbjct:    1 MRLLVVEDEVKTGDYLKQGLSEAGFQVSLARNGLDGHHLAMTELFDVIILDVML 54
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99576.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
I1XJR1_METNJ8.860e-28100.00DNA-binding response regulator n=8 Tax=root TaxID=... [more]
A0A0U2PIW3_9ALTE3.260e-2588.89Two-component system response regulator n=1 Tax=La... [more]
M5DNI1_9GAMM1.240e-2488.89Heavy metal response regulator n=12 Tax=Proteobact... [more]
A0A350QKU8_9BACT1.670e-2487.04DNA-binding response regulator n=1 Tax=Candidatus ... [more]
A0A2E0Z4P4_9GAMM2.310e-2488.89DNA-binding response regulator n=1 Tax=Halioglobus... [more]
A0A1E7Q7G3_9GAMM2.410e-2487.04DNA-binding response regulator n=6 Tax=Gammaproteo... [more]
A0A3N1NWC2_9GAMM8.950e-2490.74Two-component system copper resistance phosphate r... [more]
UPI000986D4159.140e-2487.04heavy metal response regulator transcription facto... [more]
Q21JC1_SACD21.780e-2385.19Heavy metal response regulator n=21 Tax=Gammaprote... [more]
A0A558HP03_9GAMM1.860e-2385.19Response regulator n=6 Tax=root TaxID=1 RepID=A0A5... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2300coord: 1..54
e-value: 2.4E-9
score: 39.2
NoneNo IPR availablePANTHERPTHR48111:SF46TRANSCRIPTIONAL ACTIVATORcoord: 1..54
IPR039420Transcriptional regulatory protein WalR-likePANTHERPTHR48111REGULATOR OF RPOScoord: 1..54
IPR001789Signal transduction response regulator, receiver domainPROSITEPS50110RESPONSE_REGULATORYcoord: 2..54
score: 16.109852
IPR011006CheY-like superfamilySUPERFAMILY52172CheY-likecoord: 1..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99576contigL-digitata_M_contig99576:2..163 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99576.1.1mRNA_L-digitata_M_contig99576.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99576 2..163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99576.1.1 ID=prot_L-digitata_M_contig99576.1.1|Name=mRNA_L-digitata_M_contig99576.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=54bp
MRLLLVEDEVKTGDYLQKGLSEAGFQVNLVRNGLDGHHLAMTEAFDLIVL
DVML
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039420WalR-like
IPR001789Sig_transdc_resp-reg_receiver
IPR011006CheY-like_superfamily