prot_L-digitata_M_contig99568.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99568.1.1
Unique Nameprot_L-digitata_M_contig99568.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length118
Homology
BLAST of mRNA_L-digitata_M_contig99568.1.1 vs. uniprot
Match: A0A6H5K8P6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P6_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 6.660e-46
Identity = 86/115 (74.78%), Postives = 93/115 (80.87%), Query Frame = 0
Query:    3 EVRAIVARRREFEYMLRRQEARRLDYMRYAEHELNLESLRALRTKRLGAGKG----FKDNKQKKKGXXAAATSDFSCVRLVRWIFDRAVMKFPGDVDIWLHYIDFTARQGQTKVR 113
            EVRAIV+RR+ FEYMLRR EARRLDYMRY E+ELNLESLRALRT+R+  G             KKG   AAT+DF CVRLVRWIFDRAVMKFPGDVDIWLHYIDFTARQGQ+KVR
Sbjct:   67 EVRAIVSRRKGFEYMLRRHEARRLDYMRYVEYELNLESLRALRTRRVEGGASGXXXXXXXXXTKKGK--AATADFCCVRLVRWIFDRAVMKFPGDVDIWLHYIDFTARQGQSKVR 179          
BLAST of mRNA_L-digitata_M_contig99568.1.1 vs. uniprot
Match: A0A7I6MYP0_9STRA (U3 small nucleolar RNA-associated protein 6 (Fragment) n=1 Tax=Aphanomyces iridis TaxID=601994 RepID=A0A7I6MYP0_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.300e-20
Identity = 51/116 (43.97%), Postives = 74/116 (63.79%), Query Frame = 0
Query:    2 DEVRAIVARRREFEYMLRRQEARRLDYMRYAEHELNLESLRALRTKRLGAGKGFKDNKQKKKGXXAAATSDFSCVRLVRWIFDRAVMKFPGDVDIWLHYIDFTARQGQTKVRSRFY 117
            DE+R IV +RR+FEY ++R   R++D +RY E+E+NL++LR  R KR+G         QKK      + SDF+ ++ V  IFDRA+MK  GDVD+WL +I F    G TK+ S+ +
Sbjct:    1 DEIRQIVQKRRDFEYTMKRTPLRKVDCLRYIEYEINLDALRRQRKKRMGL--------QKK------SLSDFAGMQRVHNIFDRALMKHRGDVDLWLQHIAFCKNTGSTKIMSKLF 102          
BLAST of mRNA_L-digitata_M_contig99568.1.1 vs. uniprot
Match: A0A425D2I6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425D2I6_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 7.360e-19
Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 0
Query:    2 DEVRAIVARRREFEYMLRRQEARRLDYMRYAEHELNLESLRALRTKRLGAGKGFKDNKQKKKGXXAAATSDFSCVRLVRWIFDRAVMKFPGDVDIWLHYIDFTARQGQTKVRSRFY 117
            DEVR IV +RR+FEY ++R   R++D +RY E+ELNL++LR  R KR+G  K               + SD S ++ V  IFDRA+MK  GDVD+WL +I F    G +K+ S+ +
Sbjct:   28 DEVRQIVQKRRDFEYTMKRTPLRKVDCLRYIEYELNLDALRRQRKKRMGLTK--------------LSLSDHSGMQRVHNIFDRALMKHRGDVDLWLQHIAFCKNTGSSKLLSKLF 129          
BLAST of mRNA_L-digitata_M_contig99568.1.1 vs. uniprot
Match: A0A396ZLQ1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZLQ1_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.600e-18
Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 0
Query:    2 DEVRAIVARRREFEYMLRRQEARRLDYMRYAEHELNLESLRALRTKRLGAGKGFKDNKQKKKGXXAAATSDFSCVRLVRWIFDRAVMKFPGDVDIWLHYIDFTARQGQTKVRSRFY 117
            DEVR IV +RR+FEY ++R   R++D +RY E+ELNL++LR  R KR+G  K               + SD S ++ V  IFDRA+MK  GDVD+WL +I F    G +K+ S+ +
Sbjct:   28 DEVRQIVQKRRDFEYTMKRTPLRKVDCLRYIEYELNLDALRRQRKKRMGLTK--------------LSLSDHSGMQRVHNIFDRALMKHRGDVDLWLQHIAFCKNTGSSKLLSKLF 129          
BLAST of mRNA_L-digitata_M_contig99568.1.1 vs. uniprot
Match: A0A6G0XVP7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVP7_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.250e-18
Identity = 51/116 (43.97%), Postives = 74/116 (63.79%), Query Frame = 0
Query:    2 DEVRAIVARRREFEYMLRRQEARRLDYMRYAEHELNLESLRALRTKRLGAGKGFKDNKQKKKGXXAAATSDFSCVRLVRWIFDRAVMKFPGDVDIWLHYIDFTARQGQTKVRSRFY 117
            DE+R IV +RR+FEY ++R   R++D +RY E+E+NL++LR  R KR+G         QKK      + SDF+ ++ V  IFDRA+MK  GDVD+WL +I F    G TK+ S+ +
Sbjct:   28 DEIRQIVQKRRDFEYTMKRTPLRKVDCLRYIEYEINLDALRRQRKKRMGL--------QKK------SLSDFAGMQRVHNIFDRALMKHRGDVDLWLQHIAFCKNTGSTKIMSKLF 129          
BLAST of mRNA_L-digitata_M_contig99568.1.1 vs. uniprot
Match: A0A1Y1Y702_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y702_9FUNG)

HSP 1 Score: 86.3 bits (212), Expect = 2.740e-17
Identity = 49/117 (41.88%), Postives = 74/117 (63.25%), Query Frame = 0
Query:    2 DEVRAIVARRREFEYMLRRQEARRLDYMRYAEHELNLESLRALRTKRLGAGKGFKDNKQKKKGXXAAATSDFSCVRLVRWIFDRAVMKFPGDVDIWLHYIDFTARQGQTKVRSRFYA 118
            +E+R+IV +R  FEY L+R+  +++DY+RY E+ELNLE+LR  R  RL       D K K       + SD++  R V +IF+RA++KF GDV +WL ++DF  R    K+ S+ +A
Sbjct:   28 EEIRSIVKKRTNFEYALKRRSPKKIDYLRYIEYELNLENLRKKRKARL-------DIKGK------PSVSDYAGPRRVNFIFERALLKFKGDVPLWLQWVDFAKRNKMNKLLSKIFA 131          
BLAST of mRNA_L-digitata_M_contig99568.1.1 vs. uniprot
Match: W7TSJ7_9STRA (RNA-processing protein, HAT helix n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSJ7_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.790e-17
Identity = 48/114 (42.11%), Postives = 70/114 (61.40%), Query Frame = 0
Query:    2 DEVRAIVARRREFEYMLRRQEARRLDYMRYAEHELNLESLRALRTKRLGAGKGFKDNKQKKKGXXAAATSDFSCVRLVRWIFDRAVMKFPGDVDIWLHYIDFTARQGQTKVRSR 115
            +EVRAI ++RR+FE++LRR+ AR+ D++RY  HELNLE LR LR              + K G    + SD +   L+ +IF+RA+ KF GD+++WL Y+D+    G  K  SR
Sbjct:   28 EEVRAIASKRRDFEFLLRRRTARKNDFLRYITHELNLEELRHLR--------------KHKAGLVKTSLSDHAGRGLIHFIFERALRKFRGDLELWLQYLDYCESTGSHKAHSR 127          
BLAST of mRNA_L-digitata_M_contig99568.1.1 vs. uniprot
Match: A0A7I6N543_9STRA (U3 small nucleolar RNA-associated protein 6 (Fragment) n=1 Tax=Halophytophthora batemanensis TaxID=127446 RepID=A0A7I6N543_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 6.940e-17
Identity = 49/112 (43.75%), Postives = 65/112 (58.04%), Query Frame = 0
Query:    3 EVRAIVARRREFEYMLRRQEARRLDYMRYAEHELNLESLRALRTKRLGAGKGFKDNKQKKKGXXAAATSDFSCVRLVRWIFDRAVMKFPGDVDIWLHYIDFTARQGQTKVRS 114
            EVR IVA+RR+FEY LRR   R++D +RY E+EL L++LRA R  RLG  K                  D + VR V  +FDRA+ KF G V++WL Y+ F   +G  +V S
Sbjct:   15 EVRQIVAKRRDFEYALRRLPMRKIDALRYIEYELQLDALRAARKTRLGLTK--------------TTLGDTAGVRRVHALFDRALRKFRGSVELWLQYVAFCQSEGSDRVLS 112          
BLAST of mRNA_L-digitata_M_contig99568.1.1 vs. uniprot
Match: W4H669_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H669_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 6.970e-17
Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 0
Query:    2 DEVRAIVARRREFEYMLRRQEARRLDYMRYAEHELNLESLRALRTKRLGAGKGFKDNKQKKKGXXAAATSDFSCVRLVRWIFDRAVMKFPGDVDIWLHYIDFTARQGQTKVRSRFY 117
            DEVR IV +RR+FEY ++R   R++D +RY E+ELNL++LR  R KR+G  K               + SD S ++ V  IFDRA+MK  GDVD+WL +I F    G +K+ S+ +
Sbjct:   28 DEVRQIVQKRRDFEYTMKRTPLRKVDCLRYIEYELNLDALRRQRKKRMGLTK--------------LSLSDHSGMQRVHNIFDRALMKHRGDVDLWLQHIAFCKNTGSSKLLSKLF 129          
BLAST of mRNA_L-digitata_M_contig99568.1.1 vs. uniprot
Match: A0A7I6MX11_9STRA (U3 small nucleolar RNA-associated protein 6 (Fragment) n=1 Tax=Halophytophthora exoprolifera TaxID=707993 RepID=A0A7I6MX11_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 8.120e-17
Identity = 50/110 (45.45%), Postives = 67/110 (60.91%), Query Frame = 0
Query:    3 EVRAIVARRREFEYMLRRQEARRLDYMRYAEHELNLESLRALRTKRLGAGKGFKDNKQKKKGXXAAATSDFSCVRLVRWIFDRAVMKFPGDVDIWLHYIDFTARQGQTKV 112
            E+ AIV +RR FEYML+RQ  R++D +RY E+ELNL++LRA R +RLG  K  K              SD + VR V  IFDRA+ K  G V++WL Y+ F  R+   +V
Sbjct:   10 EIHAIVEKRRGFEYMLKRQPLRKIDALRYIEYELNLDALRAKRKERLGLVKLEK--------------SDTAGVRRVHSIFDRALYKHRGSVELWLQYVAFCKREESGRV 105          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99568.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8P6_9PHAE6.660e-4674.78Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7I6MYP0_9STRA4.300e-2043.97U3 small nucleolar RNA-associated protein 6 (Fragm... [more]
A0A425D2I6_9STRA7.360e-1943.10Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A396ZLQ1_9STRA3.600e-1843.10Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6G0XVP7_9STRA4.250e-1843.97Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1Y1Y702_9FUNG2.740e-1741.88Uncharacterized protein n=1 Tax=Basidiobolus meris... [more]
W7TSJ7_9STRA2.790e-1742.11RNA-processing protein, HAT helix n=2 Tax=Monodops... [more]
A0A7I6N543_9STRA6.940e-1743.75U3 small nucleolar RNA-associated protein 6 (Fragm... [more]
W4H669_9STRA6.970e-1743.10Uncharacterized protein n=10 Tax=Aphanomyces astac... [more]
A0A7I6MX11_9STRA8.120e-1745.45U3 small nucleolar RNA-associated protein 6 (Fragm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 3..117
e-value: 5.6E-6
score: 28.3
IPR013949U3 small nucleolar RNA-associated protein 6PFAMPF08640U3_assoc_6coord: 1..60
e-value: 2.6E-16
score: 59.3
IPR013949U3 small nucleolar RNA-associated protein 6PANTHERPTHR23271HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66coord: 2..118
NoneNo IPR availablePANTHERPTHR23271:SF1U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 6 HOMOLOGcoord: 2..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99568contigL-digitata_M_contig99568:449..802 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99568.1.1mRNA_L-digitata_M_contig99568.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99568 449..802 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99568.1.1 ID=prot_L-digitata_M_contig99568.1.1|Name=mRNA_L-digitata_M_contig99568.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=118bp
QDEVRAIVARRREFEYMLRRQEARRLDYMRYAEHELNLESLRALRTKRLG
AGKGFKDNKQKKKGGGAAATSDFSCVRLVRWIFDRAVMKFPGDVDIWLHY
IDFTARQGQTKVRSRFYA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013949Utp6