prot_L-digitata_M_contig99541.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99541.1.1
Unique Nameprot_L-digitata_M_contig99541.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length36
Homology
BLAST of mRNA_L-digitata_M_contig99541.1.1 vs. uniprot
Match: A0A418WIT0_9PROT (DUF1009 domain-containing protein n=2 Tax=Oleomonas cavernae TaxID=2320859 RepID=A0A418WIT0_9PROT)

HSP 1 Score: 51.2 bits (121), Expect = 1.950e-6
Identity = 24/34 (70.59%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 GLAGVAVAAGSTLVFEKDALIAEADAAGMFVIGI 34
            GLAG+AVAAG+TLV ++DAL+A ADA G+FV+GI
Sbjct:  239 GLAGIAVAAGATLVLDRDALVARADALGLFVVGI 272          
BLAST of mRNA_L-digitata_M_contig99541.1.1 vs. uniprot
Match: A0A6N8SBS8_9HYPH (UDP-2,3-diacylglucosamine diphosphatase LpxI n=2 Tax=Shinella TaxID=323620 RepID=A0A6N8SBS8_9HYPH)

HSP 1 Score: 50.1 bits (118), Expect = 5.240e-6
Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    1 GLAGVAVAAGSTLVFEKDALIAEADAAGMFVIGILP 36
            GLAGVAV AG +LV E++AL+AEADA G+FV GI+P
Sbjct:  250 GLAGVAVEAGRSLVLEREALVAEADAHGLFVTGIVP 285          
BLAST of mRNA_L-digitata_M_contig99541.1.1 vs. uniprot
Match: UPI001F2EE6FC (UDP-2,3-diacylglucosamine diphosphatase LpxI n=3 Tax=Shinella TaxID=323620 RepID=UPI001F2EE6FC)

HSP 1 Score: 50.1 bits (118), Expect = 5.240e-6
Identity = 23/36 (63.89%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    1 GLAGVAVAAGSTLVFEKDALIAEADAAGMFVIGILP 36
            GLAG+AV AG +L+ E++ L+A+ADAAG+FV GILP
Sbjct:  250 GLAGIAVEAGRSLILERETLVAQADAAGLFVTGILP 285          
BLAST of mRNA_L-digitata_M_contig99541.1.1 vs. uniprot
Match: UPI00041117F5 (UDP-2,3-diacylglucosamine diphosphatase LpxI n=1 Tax=Salinarimonas rosea TaxID=552063 RepID=UPI00041117F5)

HSP 1 Score: 49.3 bits (116), Expect = 9.910e-6
Identity = 22/36 (61.11%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    1 GLAGVAVAAGSTLVFEKDALIAEADAAGMFVIGILP 36
            GLAG+A+ AG+TL  E+DA+IAEAD AG+F++G+ P
Sbjct:  251 GLAGIALGAGATLTIERDAMIAEADRAGLFLVGVDP 286          
BLAST of mRNA_L-digitata_M_contig99541.1.1 vs. uniprot
Match: A0A848W677_9PROT (UDP-2,3-diacylglucosamine diphosphatase LpxI n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W677_9PROT)

HSP 1 Score: 48.9 bits (115), Expect = 1.330e-5
Identity = 23/36 (63.89%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    1 GLAGVAVAAGSTLVFEKDALIAEADAAGMFVIGILP 36
            GLAG+AVAAG+TLV E + + A+ADAAG+F++GI P
Sbjct:  236 GLAGIAVAAGATLVIEPNRVTADADAAGLFIVGIKP 271          
BLAST of mRNA_L-digitata_M_contig99541.1.1 vs. uniprot
Match: A0A2E7I3Z2_9PROT (UDP-2,3-diacylglucosamine pyrophosphatase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I3Z2_9PROT)

HSP 1 Score: 48.1 bits (113), Expect = 2.510e-5
Identity = 21/36 (58.33%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 GLAGVAVAAGSTLVFEKDALIAEADAAGMFVIGILP 36
            GLAG+A+ AG+TL+ ++  L+AEAD AG+FV+GI P
Sbjct:  236 GLAGIAIGAGNTLILDRTKLVAEADKAGLFVVGIRP 271          
BLAST of mRNA_L-digitata_M_contig99541.1.1 vs. uniprot
Match: UPI001D01AA79 (UDP-2,3-diacylglucosamine diphosphatase LpxI n=1 Tax=Kinneretia sp. XES5 TaxID=2877940 RepID=UPI001D01AA79)

HSP 1 Score: 47.8 bits (112), Expect = 3.490e-5
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 GLAGVAVAAGSTLVFEKDALIAEADAAGMFVIGILP 36
            GLAG+AV AG +LV E+D LIAEA+A G+FV GI+P
Sbjct:  250 GLAGIAVEAGRSLVLERDELIAEANAHGLFVTGIVP 285          
BLAST of mRNA_L-digitata_M_contig99541.1.1 vs. uniprot
Match: UPI0014126EE2 (LpxI family protein n=1 Tax=Rhizobium sp. CRIBSB TaxID=2683264 RepID=UPI0014126EE2)

HSP 1 Score: 47.8 bits (112), Expect = 3.500e-5
Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 GLAGVAVAAGSTLVFEKDALIAEADAAGMFVIGI 34
            GLAG+AV AG  LV E+DA+IA ADAAG+FV+G+
Sbjct:  254 GLAGIAVEAGRALVVERDAVIAAADAAGLFVVGV 287          
BLAST of mRNA_L-digitata_M_contig99541.1.1 vs. uniprot
Match: A0A0Q7A1G0_9HYPH (Uncharacterized protein n=4 Tax=Rhizobium TaxID=379 RepID=A0A0Q7A1G0_9HYPH)

HSP 1 Score: 47.0 bits (110), Expect = 6.580e-5
Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 GLAGVAVAAGSTLVFEKDALIAEADAAGMFVIGI 34
            GLAG+AV AG  LV E++A+IA ADAAG+FV+GI
Sbjct:  254 GLAGIAVEAGRALVVEREAMIAAADAAGLFVVGI 287          
BLAST of mRNA_L-digitata_M_contig99541.1.1 vs. uniprot
Match: A0A7C8HMB2_9CAUL (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A7C8HMB2_9CAUL)

HSP 1 Score: 46.6 bits (109), Expect = 8.900e-5
Identity = 22/36 (61.11%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    1 GLAGVAVAAGSTLVFEKDALIAEADAAGMFVIGILP 36
            GLAG+AV AG  L+ +++ALIA ADA G+FVIG  P
Sbjct:  244 GLAGIAVEAGGALIMQREALIARADALGLFVIGFTP 279          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99541.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A418WIT0_9PROT1.950e-670.59DUF1009 domain-containing protein n=2 Tax=Oleomona... [more]
A0A6N8SBS8_9HYPH5.240e-669.44UDP-2,3-diacylglucosamine diphosphatase LpxI n=2 T... [more]
UPI001F2EE6FC5.240e-663.89UDP-2,3-diacylglucosamine diphosphatase LpxI n=3 T... [more]
UPI00041117F59.910e-661.11UDP-2,3-diacylglucosamine diphosphatase LpxI n=1 T... [more]
A0A848W677_9PROT1.330e-563.89UDP-2,3-diacylglucosamine diphosphatase LpxI n=1 T... [more]
A0A2E7I3Z2_9PROT2.510e-558.33UDP-2,3-diacylglucosamine pyrophosphatase n=2 Tax=... [more]
UPI001D01AA793.490e-566.67UDP-2,3-diacylglucosamine diphosphatase LpxI n=1 T... [more]
UPI0014126EE23.500e-567.65LpxI family protein n=1 Tax=Rhizobium sp. CRIBSB T... [more]
A0A0Q7A1G0_9HYPH6.580e-567.65Uncharacterized protein n=4 Tax=Rhizobium TaxID=37... [more]
A0A7C8HMB2_9CAUL8.900e-561.11Uncharacterized protein n=2 Tax=Alphaproteobacteri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043167LpxI, C-terminal domain superfamilyGENE3D3.40.140.80coord: 1..35
e-value: 8.6E-8
score: 33.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99541contigL-digitata_M_contig99541:2..109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99541.1.1mRNA_L-digitata_M_contig99541.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99541 2..109 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99541.1.1 ID=prot_L-digitata_M_contig99541.1.1|Name=mRNA_L-digitata_M_contig99541.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=36bp
GLAGVAVAAGSTLVFEKDALIAEADAAGMFVIGILP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043167LpxI_C_sf