prot_L-digitata_M_contig99264.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99264.1.1
Unique Nameprot_L-digitata_M_contig99264.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length115
Homology
BLAST of mRNA_L-digitata_M_contig99264.1.1 vs. uniprot
Match: A0A2E8XQI5_9PROT (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XQI5_9PROT)

HSP 1 Score: 184 bits (466), Expect = 9.110e-56
Identity = 90/111 (81.08%), Postives = 101/111 (90.99%), Query Frame = 0
Query:    1 MIAVSEGFALADKLNLDKQKLFDIASTATSQCWSMTSYCPVPGPVPTSPANRDYEAGFTVAMMLKDLKLAQEAAQTVDANTPLGAQATEIYDAFSAAGHDGLDFSAIFKHI 111
            MI+VSEGFAL +KL LD Q LFDIASTATSQCW+MTSYCPVPGPVPTSPAN +Y+AGFTVAMMLKDLKLAQEAA TVDANTPLG QATE+YDA++AAG++ LDFSAI + I
Sbjct:  182 MISVSEGFALGEKLGLDTQALFDIASTATSQCWAMTSYCPVPGPVPTSPANNNYQAGFTVAMMLKDLKLAQEAAATVDANTPLGTQATEMYDAYAAAGNEDLDFSAIIRQI 292          
BLAST of mRNA_L-digitata_M_contig99264.1.1 vs. uniprot
Match: A0A2E7PMJ8_9PROT (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PMJ8_9PROT)

HSP 1 Score: 182 bits (461), Expect = 5.180e-55
Identity = 87/111 (78.38%), Postives = 98/111 (88.29%), Query Frame = 0
Query:    1 MIAVSEGFALADKLNLDKQKLFDIASTATSQCWSMTSYCPVPGPVPTSPANRDYEAGFTVAMMLKDLKLAQEAAQTVDANTPLGAQATEIYDAFSAAGHDGLDFSAIFKHI 111
            MIAVSEGF LA+KL L+ QKLFDI+STAT+QCW+MTSYCPVPGPVPTSPAN DY AGFTVAMMLKDLKL+QE A    ANTPLGA ATE+YDA++ AGH+GLDFSAI +HI
Sbjct:  182 MIAVSEGFGLAEKLGLNAQKLFDISSTATAQCWAMTSYCPVPGPVPTSPANNDYAAGFTVAMMLKDLKLSQEVASITGANTPLGAHATELYDAYATAGHEGLDFSAIIRHI 292          
BLAST of mRNA_L-digitata_M_contig99264.1.1 vs. uniprot
Match: A0A2E7I2V1_9PROT (3-hydroxyisobutyrate dehydrogenase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I2V1_9PROT)

HSP 1 Score: 173 bits (439), Expect = 1.080e-51
Identity = 83/113 (73.45%), Postives = 96/113 (84.96%), Query Frame = 0
Query:    1 MIAVSEGFALADKLNLDKQKLFDIASTATSQCWSMTSYCPVPGPVPTSPANRDYEAGFTVAMMLKDLKLAQEAAQTVDANTPLGAQATEIYDAFSAAGHDGLDFSAIFKHIAD 113
            MIAVSEGF LA+KL LD QKLFDI+STAT+QCW+MTSYCPVPGPVP+SPAN  Y AGFTVAMMLKDLKL+QE A    ANTPLGA ATE++DA++  G++ LDFSAI +HI D
Sbjct:  182 MIAVSEGFGLAEKLGLDAQKLFDISSTATAQCWAMTSYCPVPGPVPSSPANNKYAAGFTVAMMLKDLKLSQEVASLTGANTPLGAHATELFDAYAGEGNENLDFSAIIRHITD 294          
BLAST of mRNA_L-digitata_M_contig99264.1.1 vs. uniprot
Match: A0A848W4Q6_9PROT (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W4Q6_9PROT)

HSP 1 Score: 171 bits (434), Expect = 6.290e-51
Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 0
Query:    1 MIAVSEGFALADKLNLDKQKLFDIASTATSQCWSMTSYCPVPGPVPTSPANRDYEAGFTVAMMLKDLKLAQEAAQTVDANTPLGAQATEIYDAFSAAGHDG-LDFSAIFKHIADA 114
            MIAVSEGF LA+KL+LD QKL+DI STATSQCW+MTSYCPVPGPVP+SPAN DY AGFTVAMMLKDLKL+QEAA + DANTPLGA AT++YD+F++ G +  LDFSAI + I D+
Sbjct:  182 MIAVSEGFLLAEKLDLDAQKLWDIVSTATSQCWAMTSYCPVPGPVPSSPANNDYAAGFTVAMMLKDLKLSQEAAASADANTPLGAHATQLYDSFASLGDNAELDFSAIIRQIRDS 296          
BLAST of mRNA_L-digitata_M_contig99264.1.1 vs. uniprot
Match: A0A6N7JQ23_9PROT (3-hydroxyisobutyrate dehydrogenase n=2 Tax=Azospirillaceae TaxID=2829815 RepID=A0A6N7JQ23_9PROT)

HSP 1 Score: 169 bits (429), Expect = 3.470e-50
Identity = 83/111 (74.77%), Postives = 94/111 (84.68%), Query Frame = 0
Query:    1 MIAVSEGFALADKLNLDKQKLFDIASTATSQCWSMTSYCPVPGPVPTSPANRDYEAGFTVAMMLKDLKLAQEAAQTVDANTPLGAQATEIYDAFSAAGHDGLDFSAIFKHI 111
            MIAVSE FALADKL LD+QKLFDI+S ++ QCWS+TSYCPVPGPVPTSPANRDY+ GF V MMLKDLKLAQ+AA +  A+TPLGAQA  +Y  FSAAGH GLDFSAI K +
Sbjct:  182 MIAVSEAFALADKLGLDRQKLFDISSKSSGQCWSLTSYCPVPGPVPTSPANRDYQPGFAVDMMLKDLKLAQQAAASAGASTPLGAQAAALYQLFSAAGHGGLDFSAIVKML 292          
BLAST of mRNA_L-digitata_M_contig99264.1.1 vs. uniprot
Match: A0A2S6QH70_9PROT (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha12_Bin1 TaxID=2013107 RepID=A0A2S6QH70_9PROT)

HSP 1 Score: 166 bits (421), Expect = 5.720e-49
Identity = 83/112 (74.11%), Postives = 99/112 (88.39%), Query Frame = 0
Query:    1 MIAVSEGFALADKLNLDKQKLFDIASTATSQCWSMTSYCPVPGPVPTSPANRDYEAGFTVAMMLKDLKLAQEAAQTVDANTPLGAQATEIYDAFSAAG-HDGLDFSAIFKHI 111
            MIAVSEGF LADKL LDKQKL+DIASTATSQCW+MT+YCPVPGPVP+SPANRDY+AGFT+AMMLKDLKL+QEAA+   A TPL A AT++Y++F++   +DGLDFS+I K I
Sbjct:  182 MIAVSEGFVLADKLGLDKQKLWDIASTATSQCWAMTNYCPVPGPVPSSPANRDYQAGFTIAMMLKDLKLSQEAAKNNGAFTPLAALATDLYESFASTNQNDGLDFSSIIKLI 293          
BLAST of mRNA_L-digitata_M_contig99264.1.1 vs. uniprot
Match: A0A2K9NHI1_9PROT (3-hydroxyisobutyrate dehydrogenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2K9NHI1_9PROT)

HSP 1 Score: 166 bits (420), Expect = 7.880e-49
Identity = 82/111 (73.87%), Postives = 94/111 (84.68%), Query Frame = 0
Query:    1 MIAVSEGFALADKLNLDKQKLFDIASTATSQCWSMTSYCPVPGPVPTSPANRDYEAGFTVAMMLKDLKLAQEAAQTVDANTPLGAQATEIYDAFSAAGHDGLDFSAIFKHI 111
            MIAVSE FALADKL L++QKLFDI+ST++ QCWS+TSYCPVPGPVPTSPANRDY  GF V MMLKDLKLAQ+AA +  A+TPLGAQA  +Y  FSAAG+ GLDFSAI K +
Sbjct:  182 MIAVSEAFALADKLGLERQKLFDISSTSSGQCWSLTSYCPVPGPVPTSPANRDYAPGFAVDMMLKDLKLAQQAAASSGASTPLGAQAASLYQLFSAAGNGGLDFSAIVKML 292          
BLAST of mRNA_L-digitata_M_contig99264.1.1 vs. uniprot
Match: A0A346R1A0_9HYPH (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Breoghania sp. L-A4 TaxID=2304600 RepID=A0A346R1A0_9HYPH)

HSP 1 Score: 166 bits (421), Expect = 8.930e-49
Identity = 79/111 (71.17%), Postives = 94/111 (84.68%), Query Frame = 0
Query:    1 MIAVSEGFALADKLNLDKQKLFDIASTATSQCWSMTSYCPVPGPVPTSPANRDYEAGFTVAMMLKDLKLAQEAAQTVDANTPLGAQATEIYDAFSAAGHDGLDFSAIFKHI 111
            MI VSE F LA+KL LD QKLFDIASTA+ QCWSMTSYCPVPGPVP SPANRDY+ GF  AMMLKDLKLAQ+AA++VDA+TPLGA+A+ +Y  F  AG++G+DFS I K++
Sbjct:  195 MIGVSEAFVLAEKLGLDHQKLFDIASTASGQCWSMTSYCPVPGPVPASPANRDYQPGFAAAMMLKDLKLAQDAARSVDASTPLGAEASALYSLFCNAGNEGMDFSGIIKYL 305          
BLAST of mRNA_L-digitata_M_contig99264.1.1 vs. uniprot
Match: UPI001C6590B9 (NAD-binding protein n=1 Tax=Aerococcus urinae TaxID=1376 RepID=UPI001C6590B9)

HSP 1 Score: 162 bits (410), Expect = 1.030e-48
Identity = 78/111 (70.27%), Postives = 91/111 (81.98%), Query Frame = 0
Query:    1 MIAVSEGFALADKLNLDKQKLFDIASTATSQCWSMTSYCPVPGPVPTSPANRDYEAGFTVAMMLKDLKLAQEAAQTVDANTPLGAQATEIYDAFSAAGHDGLDFSAIFKHI 111
            MIAVSE F L +KL LD Q LF+I+STA+ QCWSMTSYCPVPGPVPTSPANRDY+ GFT AMMLKDL+LAQ+A++T  A TPLGAQA ++Y    A+GHDGLDFS + K I
Sbjct:   69 MIAVSEAFVLGEKLGLDAQTLFNISSTASGQCWSMTSYCPVPGPVPTSPANRDYKPGFTAAMMLKDLRLAQDASKTAKAPTPLGAQAAQLYALMEASGHDGLDFSGVIKLI 179          
BLAST of mRNA_L-digitata_M_contig99264.1.1 vs. uniprot
Match: UPI0003FDABBA (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Niveispirillum irakense TaxID=34011 RepID=UPI0003FDABBA)

HSP 1 Score: 165 bits (418), Expect = 1.580e-48
Identity = 81/109 (74.31%), Postives = 93/109 (85.32%), Query Frame = 0
Query:    1 MIAVSEGFALADKLNLDKQKLFDIASTATSQCWSMTSYCPVPGPVPTSPANRDYEAGFTVAMMLKDLKLAQEAAQTVDANTPLGAQATEIYDAFSAAGHDGLDFSAIFK 109
            MIAVSE FALADKL L++QKLFDI+ST++ QCWS+TSYCPVPGPVPTSPANRDY+ GF V MMLKDLKLAQ+AA +  A TPLGAQA  +Y  FSAAG+ G+DFSAI K
Sbjct:  182 MIAVSEAFALADKLGLERQKLFDISSTSSGQCWSLTSYCPVPGPVPTSPANRDYQPGFAVDMMLKDLKLAQQAAASAGAATPLGAQAAALYQLFSAAGNGGMDFSAIVK 290          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99264.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8XQI5_9PROT9.110e-5681.083-hydroxyisobutyrate dehydrogenase n=1 Tax=Alphapr... [more]
A0A2E7PMJ8_9PROT5.180e-5578.383-hydroxyisobutyrate dehydrogenase n=1 Tax=Rhodosp... [more]
A0A2E7I2V1_9PROT1.080e-5173.453-hydroxyisobutyrate dehydrogenase n=2 Tax=Alphapr... [more]
A0A848W4Q6_9PROT6.290e-5173.913-hydroxyisobutyrate dehydrogenase n=1 Tax=Alphapr... [more]
A0A6N7JQ23_9PROT3.470e-5074.773-hydroxyisobutyrate dehydrogenase n=2 Tax=Azospir... [more]
A0A2S6QH70_9PROT5.720e-4974.113-hydroxyisobutyrate dehydrogenase n=1 Tax=Alphapr... [more]
A0A2K9NHI1_9PROT7.880e-4973.873-hydroxyisobutyrate dehydrogenase n=3 Tax=Alphapr... [more]
A0A346R1A0_9HYPH8.930e-4971.173-hydroxyisobutyrate dehydrogenase n=1 Tax=Breogha... [more]
UPI001C6590B91.030e-4870.27NAD-binding protein n=1 Tax=Aerococcus urinae TaxI... [more]
UPI0003FDABBA1.580e-4874.313-hydroxyisobutyrate dehydrogenase n=1 Tax=Niveisp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0133286-phosphogluconate dehydrogenase, domain 2GENE3D1.10.1040.10coord: 1..114
e-value: 1.3E-33
score: 117.8
IPR0291543-hydroxyisobutyrate dehydrogenase, NAD-binding domainPFAMPF14833NAD_binding_11coord: 1..110
e-value: 7.5E-30
score: 103.7
NoneNo IPR availablePANTHERPTHR229813-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATEDcoord: 1..112
NoneNo IPR availablePANTHERPTHR22981:SF73-HYDROXYISOBUTYRATE DEHYDROGENASE, MITOCHONDRIALcoord: 1..112
IPR0089276-phosphogluconate dehydrogenase-like, C-terminal domain superfamilySUPERFAMILY481796-phosphogluconate dehydrogenase C-terminal domain-likecoord: 1..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99264contigL-digitata_M_contig99264:13..357 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99264.1.1mRNA_L-digitata_M_contig99264.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99264 1..357 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99264.1.1 ID=prot_L-digitata_M_contig99264.1.1|Name=mRNA_L-digitata_M_contig99264.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=115bp
MIAVSEGFALADKLNLDKQKLFDIASTATSQCWSMTSYCPVPGPVPTSPA
NRDYEAGFTVAMMLKDLKLAQEAAQTVDANTPLGAQATEIYDAFSAAGHD
GLDFSAIFKHIADA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0133286PGD_dom2
IPR029154NADP-bd
IPR0089276-PGluconate_DH-like_C_sf