prot_L-digitata_M_contig99257.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99257.1.1
Unique Nameprot_L-digitata_M_contig99257.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length41
Homology
BLAST of mRNA_L-digitata_M_contig99257.1.1 vs. uniprot
Match: A0A0Q6S979_9HYPH (Uncharacterized protein n=1 Tax=Rhizobium sp. Root1204 TaxID=1736428 RepID=A0A0Q6S979_9HYPH)

HSP 1 Score: 56.2 bits (134), Expect = 4.530e-8
Identity = 28/40 (70.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 MSITAVVLGGAVIGGGRGSFISVLLGAALVQITWTSSSFL 40
            MS+TAVVLGGA+I GGRGSF++ L GAALVQ+T +++SFL
Sbjct:  768 MSVTAVVLGGAIISGGRGSFVATLFGAALVQLTSSAASFL 807          
BLAST of mRNA_L-digitata_M_contig99257.1.1 vs. uniprot
Match: A0A6L7G8H1_9RHOB (ATP-binding cassette domain-containing protein n=1 Tax=Pseudooceanicola sp. GBMRC 2024 TaxID=2692189 RepID=A0A6L7G8H1_9RHOB)

HSP 1 Score: 52.8 bits (125), Expect = 7.590e-7
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 MSITAVVLGGAVIGGGRGSFISVLLGAALVQITWTSSSFL 40
            MSITAVVLGGA+I GGRGSF++ L GA LVQ+  +++SFL
Sbjct:  757 MSITAVVLGGAIISGGRGSFLATLFGAILVQVNASATSFL 796          
BLAST of mRNA_L-digitata_M_contig99257.1.1 vs. uniprot
Match: A0A0Q6SF31_9HYPH (Uncharacterized protein n=1 Tax=Rhizobium sp. Root1204 TaxID=1736428 RepID=A0A0Q6SF31_9HYPH)

HSP 1 Score: 51.2 bits (121), Expect = 2.660e-6
Identity = 26/40 (65.00%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 MSITAVVLGGAVIGGGRGSFISVLLGAALVQITWTSSSFL 40
            MSITAVVLGGAVI GG GSF++ L GA LVQ+T+++++F+
Sbjct: 1103 MSITAVVLGGAVISGGFGSFVATLFGALLVQMTFSATAFM 1142          
BLAST of mRNA_L-digitata_M_contig99257.1.1 vs. uniprot
Match: UPI0010F5237F (ATP-binding cassette domain-containing protein n=1 Tax=Mesorhizobium comanense TaxID=2502215 RepID=UPI0010F5237F)

HSP 1 Score: 50.1 bits (118), Expect = 6.810e-6
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    1 MSITAVVLGGAVIGGGRGSFISVLLGAALVQITWTSSSFL 40
            MSITAVVLGGA + GGRGSF++ + GA L+Q T ++SSFL
Sbjct:  771 MSITAVVLGGAAVTGGRGSFLATMAGALLIQSTISASSFL 810          
BLAST of mRNA_L-digitata_M_contig99257.1.1 vs. uniprot
Match: D3F3J0_CONWI (ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / CIP 108061 / JCM 11494 / NBRC 100937 / ID131577) TaxID=469383 RepID=D3F3J0_CONWI)

HSP 1 Score: 50.1 bits (118), Expect = 6.810e-6
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    2 SITAVVLGGAVIGGGRGSFISVLLGAALVQITWTSSSFL 40
            SITAVVLGGA I GGRGSF+  LLGAALVQ   T+++FL
Sbjct:  764 SITAVVLGGASIFGGRGSFLGALLGAALVQCATTATTFL 802          
BLAST of mRNA_L-digitata_M_contig99257.1.1 vs. uniprot
Match: A0A2A9G246_9PSEU (Ribose transport system ATP-binding protein n=3 Tax=Amycolatopsis TaxID=1813 RepID=A0A2A9G246_9PSEU)

HSP 1 Score: 49.3 bits (116), Expect = 1.270e-5
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    2 SITAVVLGGAVIGGGRGSFISVLLGAALVQITWTSSSF 39
            SITAVVLGGA I GGRGSF+ VL G  L+Q+T T++SF
Sbjct:  755 SITAVVLGGASIFGGRGSFVGVLFGVLLLQVTQTTASF 792          
BLAST of mRNA_L-digitata_M_contig99257.1.1 vs. uniprot
Match: A0A8G0E0J9_9PSEU (ATP-binding cassette domain-containing protein n=2 Tax=unclassified Amycolatopsis TaxID=2618356 RepID=A0A8G0E0J9_9PSEU)

HSP 1 Score: 48.1 bits (113), Expect = 3.270e-5
Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    2 SITAVVLGGAVIGGGRGSFISVLLGAALVQITWTSSSFL 40
            SITAVVLGGA + GGRGSFI  LLGAAL+Q    +++FL
Sbjct:  766 SITAVVLGGASLAGGRGSFIGTLLGAALIQEVLNATTFL 804          
BLAST of mRNA_L-digitata_M_contig99257.1.1 vs. uniprot
Match: A0A2N3Y027_SACSN (Ribose transport system ATP-binding protein n=4 Tax=Saccharopolyspora TaxID=1835 RepID=A0A2N3Y027_SACSN)

HSP 1 Score: 47.8 bits (112), Expect = 4.470e-5
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    2 SITAVVLGGAVIGGGRGSFISVLLGAALVQITWTSSSF 39
            SITAVVLGGA I GGRGSFI VL G  L+Q+T  ++SF
Sbjct:  759 SITAVVLGGASIFGGRGSFIGVLFGVLLLQVTQNTASF 796          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99257.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A0Q6S979_9HYPH4.530e-870.00Uncharacterized protein n=1 Tax=Rhizobium sp. Root... [more]
A0A6L7G8H1_9RHOB7.590e-767.50ATP-binding cassette domain-containing protein n=1... [more]
A0A0Q6SF31_9HYPH2.660e-665.00Uncharacterized protein n=1 Tax=Rhizobium sp. Root... [more]
UPI0010F5237F6.810e-665.00ATP-binding cassette domain-containing protein n=1... [more]
D3F3J0_CONWI6.810e-671.79ABC transporter related protein n=1 Tax=Conexibact... [more]
A0A2A9G246_9PSEU1.270e-568.42Ribose transport system ATP-binding protein n=3 Ta... [more]
A0A8G0E0J9_9PSEU3.270e-566.67ATP-binding cassette domain-containing protein n=2... [more]
A0A2N3Y027_SACSN4.470e-568.42Ribose transport system ATP-binding protein n=4 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99257contigL-digitata_M_contig99257:636..758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99257.1.1mRNA_L-digitata_M_contig99257.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99257 552..956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99257.1.1 ID=prot_L-digitata_M_contig99257.1.1|Name=mRNA_L-digitata_M_contig99257.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=41bp
MSITAVVLGGAVIGGGRGSFISVLLGAALVQITWTSSSFL*
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