prot_L-digitata_M_contig99208.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99208.1.1
Unique Nameprot_L-digitata_M_contig99208.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length100
Homology
BLAST of mRNA_L-digitata_M_contig99208.1.1 vs. uniprot
Match: A0A2E8XTX8_9PROT (YHS domain protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XTX8_9PROT)

HSP 1 Score: 145 bits (367), Expect = 3.370e-43
Identity = 71/100 (71.00%), Postives = 78/100 (78.00%), Query Frame = 0
Query:    1 MRPFIQAATFLFAVFVLISPAHAVDPVFHVDGKAIRGYDPVAYFTQEKAVEGSPAHSIEYNGATWQFASAENRELFAANPEKYAPAYGGYCAFAVANNYT 100
            MR  I  ATFLF  FV   PA AVDPVF+  GKAIRGYDPVAYFT+EKAV+G   HS  + GA WQF+SA N+ELFAANPEKYAP YGGYCA+AV NNYT
Sbjct:    1 MRIAISVATFLFIAFVSAGPALAVDPVFNTGGKAIRGYDPVAYFTEEKAVKGKSEHSFTFQGAIWQFSSAANQELFAANPEKYAPQYGGYCAWAVVNNYT 100          
BLAST of mRNA_L-digitata_M_contig99208.1.1 vs. uniprot
Match: UPI001872992E (YHS domain-containing protein n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001872992E)

HSP 1 Score: 115 bits (289), Expect = 5.880e-31
Identity = 56/99 (56.57%), Postives = 68/99 (68.69%), Query Frame = 0
Query:    2 RPFIQAATFLFAVFVLISPAHAVDPVFHVDGKAIRGYDPVAYFTQEKAVEGSPAHSIEYNGATWQFASAENRELFAANPEKYAPAYGGYCAFAVANNYT 100
            R F+ AA           PA A+DP F+ DG AI+GYDPVAYFT+ K V G P  + ++ GATWQFASA NR+ FAA PE+YAP YGGYCA+AV+  YT
Sbjct:    9 RHFLAAAVAAGLAAGAAGPAQALDPTFNTDGLAIQGYDPVAYFTEGKPVYGKPEFTYDFAGATWQFASAANRDTFAAEPERYAPQYGGYCAWAVSEGYT 107          
BLAST of mRNA_L-digitata_M_contig99208.1.1 vs. uniprot
Match: A0A7G7ZDK5_9GAMM (YHS domain protein n=2 Tax=Halomonas sp. SH5A2 TaxID=2749040 RepID=A0A7G7ZDK5_9GAMM)

HSP 1 Score: 114 bits (286), Expect = 1.540e-30
Identity = 54/78 (69.23%), Postives = 61/78 (78.21%), Query Frame = 0
Query:   19 SPAHAVDPVFHVDGKAIRGYDPVAYFTQEKAVEGSPAHSIEYNGATWQFASAENRELFAANPEKYAPAYGGYCAFAVA 96
            SP    +PVF  DG AIRGYDPVAYFT +K V GS AH+ E+NG TW FA+AE+RE FAA PE YAPAYGGYCA+AVA
Sbjct:   22 SPVAEAEPVFAEDGIAIRGYDPVAYFTADKPVAGSSAHAFEWNGVTWHFANAEHRERFAAKPEMYAPAYGGYCAWAVA 99          
BLAST of mRNA_L-digitata_M_contig99208.1.1 vs. uniprot
Match: UPI000B3627E2 (YHS domain-containing protein n=1 Tax=Thaumasiovibrio occultus TaxID=1891184 RepID=UPI000B3627E2)

HSP 1 Score: 114 bits (284), Expect = 3.370e-30
Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = 0
Query:    1 MRPFIQAATFLFAVFVLISPAHAVDPVFHVD---GKAIRGYDPVAYFTQEKAVEGSPAHSIEYNGATWQFASAENRELFAANPEKYAPAYGGYCAFAVANNYT 100
            ++  + A + +F+   L   A A++PV+      GKAI+GYDPVAYFTQ K VEGS  +  E+ GA WQFASAE+R+LF ANPEKYAP YGGYCA+AV+  YT
Sbjct:    6 LKSVLMAFSLMFSAIALSPAALAIEPVYSDYFGYGKAIKGYDPVAYFTQGKPVEGSSDYQYEWMGADWQFASAEHRDLFVANPEKYAPQYGGYCAWAVSEGYT 108          
BLAST of mRNA_L-digitata_M_contig99208.1.1 vs. uniprot
Match: A0A511QNB6_9VIBR (YHS domain-containing protein n=1 Tax=Vibrio superstes NBRC 103154 TaxID=1219062 RepID=A0A511QNB6_9VIBR)

HSP 1 Score: 112 bits (280), Expect = 1.180e-29
Identity = 55/101 (54.46%), Postives = 72/101 (71.29%), Query Frame = 0
Query:    1 MRPFIQAATFLFAVFVLISPAHAVDPVFH-VDGKAIRGYDPVAYFTQEKAVEGSPAHSIEYNGATWQFASAENRELFAANPEKYAPAYGGYCAFAVANNYT 100
            ++  +Q  +    VF+LI PA AV+PV+    GKAI+GYDPVAYFT+ K VEGS  +  E+N ATW F+S++N+  F  NPEKYAP YGGYCA+AV+  YT
Sbjct:    3 LKGLLQLLSAFVLVFMLIRPALAVEPVYSDFFGKAIQGYDPVAYFTERKPVEGSKQYKYEWNDATWYFSSSKNKSAFIDNPEKYAPQYGGYCAWAVSQGYT 103          
BLAST of mRNA_L-digitata_M_contig99208.1.1 vs. uniprot
Match: UPI0014247035 (YHS domain-containing protein n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI0014247035)

HSP 1 Score: 112 bits (280), Expect = 1.480e-29
Identity = 54/96 (56.25%), Postives = 67/96 (69.79%), Query Frame = 0
Query:    5 IQAATFLFAVFVLISPAHAVDPVFHVDGKAIRGYDPVAYFTQEKAVEGSPAHSIEYNGATWQFASAENRELFAANPEKYAPAYGGYCAFAVANNYT 100
            + AA    A  +   PA A+DPVF   G AIRG+DPVAYFT+   VEG P  +  ++GA WQFASA NR+ FAA+PE+YAP YGGYCA+AV+  YT
Sbjct:   15 VMAAGLTAAALISARPAWAIDPVFTKGGLAIRGFDPVAYFTEGTPVEGKPLFTHRHDGALWQFASAANRDAFAADPERYAPQYGGYCAWAVSQGYT 110          
BLAST of mRNA_L-digitata_M_contig99208.1.1 vs. uniprot
Match: A0A090RG79_9VIBR (YHS domain-containing protein n=2 Tax=Vibrio TaxID=662 RepID=A0A090RG79_9VIBR)

HSP 1 Score: 110 bits (276), Expect = 4.510e-29
Identity = 55/101 (54.46%), Postives = 72/101 (71.29%), Query Frame = 0
Query:    1 MRPFIQAATFLFAVFVLISPAHAVDPVFH-VDGKAIRGYDPVAYFTQEKAVEGSPAHSIEYNGATWQFASAENRELFAANPEKYAPAYGGYCAFAVANNYT 100
            MR F++  + +  +F  +S A+A++PV+    GKAI+GYDPVAYFT+ KAVEG      E+NGA W F+S EN E FA NPE+YAP YGGYCA+AV+  YT
Sbjct:    1 MRLFLKLFSVVTLMFSFMSTAYALEPVYSDFFGKAIKGYDPVAYFTEGKAVEGDSDFQYEWNGADWYFSSQENLERFAGNPERYAPQYGGYCAWAVSKGYT 101          
BLAST of mRNA_L-digitata_M_contig99208.1.1 vs. uniprot
Match: A0A657B4R4_9GAMM (YHS domain protein n=2 Tax=unclassified Oleiphilus TaxID=2631174 RepID=A0A657B4R4_9GAMM)

HSP 1 Score: 110 bits (275), Expect = 6.400e-29
Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = 0
Query:    1 MRPFIQAATFLFAVFVLISPAHAVDPVF-HVDGKAIRGYDPVAYFTQEKAVEGSPAHSIEYNGATWQFASAENRELFAANPEKYAPAYGGYCAFAVANNYT 100
            M+  +++ +F+  + + ISPA+AV+ V+    GKAI GYDPVAYF+Q K V+G    + E+NGATW FA+AEN++LF  NPE++AP YGGYCA+AV+  YT
Sbjct:    1 MQTLLRSLSFVTLLTLFISPANAVEHVYTDFFGKAIEGYDPVAYFSQSKPVKGESEFTYEWNGATWYFANAENKQLFIDNPEQFAPQYGGYCAWAVSQGYT 101          
BLAST of mRNA_L-digitata_M_contig99208.1.1 vs. uniprot
Match: A0A0B8QNT5_9VIBR (YHS domain-containing protein n=4 Tax=Vibrio TaxID=662 RepID=A0A0B8QNT5_9VIBR)

HSP 1 Score: 110 bits (274), Expect = 9.590e-29
Identity = 55/95 (57.89%), Postives = 71/95 (74.74%), Query Frame = 0
Query:    7 AATFLFAVFVLISPAHAVDPVFH-VDGKAIRGYDPVAYFTQEKAVEGSPAHSIEYNGATWQFASAENRELFAANPEKYAPAYGGYCAFAVANNYT 100
            +A F  +VF+ + PA A++PV+    GKAI+GYDPVAYFT+ K VEGS  H  E+N ATW FAS +NR+ F A+PEK+AP YGGYCA+AV+  YT
Sbjct:   10 SAIFFVSVFISM-PALALEPVYSDFFGKAIQGYDPVAYFTESKPVEGSKKHKYEWNDATWYFASEKNRDAFKADPEKFAPQYGGYCAWAVSQGYT 103          
BLAST of mRNA_L-digitata_M_contig99208.1.1 vs. uniprot
Match: A0A6M8WE91_9PROT (YHS domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8WE91_9PROT)

HSP 1 Score: 110 bits (274), Expect = 9.860e-29
Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 0
Query:   21 AHAVDPVFHVDGKAIRGYDPVAYFTQEKAVEGSPAHSIEYNGATWQFASAENRELFAANPEKYAPAYGGYCAFAVANNYT 100
            A A +PVF     AIRGYDPVAYF Q K V+G P  S+EY GATW+FASAENR+ FAA P +YAP YGGYCA+AV+  YT
Sbjct:   25 AAAEEPVFSTRAGAIRGYDPVAYFAQGKPVKGDPRFSLEYQGATWRFASAENRDRFAAEPGRYAPQYGGYCAWAVSQGYT 104          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99208.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8XTX8_9PROT3.370e-4371.00YHS domain protein n=1 Tax=Alphaproteobacteria bac... [more]
UPI001872992E5.880e-3156.57YHS domain-containing protein n=1 Tax=Pelagibius s... [more]
A0A7G7ZDK5_9GAMM1.540e-3069.23YHS domain protein n=2 Tax=Halomonas sp. SH5A2 Tax... [more]
UPI000B3627E23.370e-3055.34YHS domain-containing protein n=1 Tax=Thaumasiovib... [more]
A0A511QNB6_9VIBR1.180e-2954.46YHS domain-containing protein n=1 Tax=Vibrio super... [more]
UPI00142470351.480e-2956.25YHS domain-containing protein n=1 Tax=Pelagibius l... [more]
A0A090RG79_9VIBR4.510e-2954.46YHS domain-containing protein n=2 Tax=Vibrio TaxID... [more]
A0A657B4R4_9GAMM6.400e-2952.48YHS domain protein n=2 Tax=unclassified Oleiphilus... [more]
A0A0B8QNT5_9VIBR9.590e-2957.89YHS domain-containing protein n=4 Tax=Vibrio TaxID... [more]
A0A6M8WE91_9PROT9.860e-2965.00YHS domain-containing protein n=1 Tax=Proteobacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007029YHS domainPFAMPF04945YHScoord: 43..86
e-value: 2.8E-9
score: 36.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99208contigL-digitata_M_contig99208:3..302 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99208.1.1mRNA_L-digitata_M_contig99208.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99208 3..308 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99208.1.1 ID=prot_L-digitata_M_contig99208.1.1|Name=mRNA_L-digitata_M_contig99208.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=100bp
MRPFIQAATFLFAVFVLISPAHAVDPVFHVDGKAIRGYDPVAYFTQEKAV
EGSPAHSIEYNGATWQFASAENRELFAANPEKYAPAYGGYCAFAVANNYT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007029YHS_dom