prot_L-digitata_M_contig9916.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9916.1.1
Unique Nameprot_L-digitata_M_contig9916.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length260
Homology
BLAST of mRNA_L-digitata_M_contig9916.1.1 vs. uniprot
Match: D8LSA6_ECTSI (3Beta_HSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSA6_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 3.080e-103
Identity = 169/273 (61.90%), Postives = 201/273 (73.63%), Query Frame = 0
Query:    1 MVYVDNLVEAQVLAGRKLMEGAADAQAGGAGWSTH-APVCSGQAYFVTDGR------------PCNLQAFADGVLDGLDFSTSKVVRVPKVIALATAGMAELVCKVRLTRTPVW-TRKEVRTLTEDRTSSIARIRTDLGYEPIVDAGTALRSTVAGLKEAGWGRHTFLVPGLGYWIAIPLYLWFLTISGFESACPAFLAPVQRASLYIHLAICRRLFVVRAIAVLLLLLHVVEGLYAYTRAQRAGHKDTAPLWLIQTVIIGFPSTRLVMRLLS 259
            M++  NL++A VLAG +L EGAA AQAGGAGWST   P CSGQ+Y VTDG+            P  LQAF DGVL+GLDF+TSKV+R+P   ALA A   ELVCK++LT  P   TR EVR L E+R S I R R DLGYEP VD  TALR+ V  LK  GWGRHT LVPGLGYWI IPL +W   ++ F++ CPAFLAPVQR SLYIHLA+ R+L++VR + VL +L HV+EG YA+ RA+RAGH DTAP WLIQT+I+G+PSTRLVMRLLS
Sbjct:   92 MIFFQNLIDATVLAGTQLAEGAAGAQAGGAGWSTRKGPACSGQSYCVTDGQRGGGDGDGGGVQPGGLQAFMDGVLEGLDFTTSKVLRLPVFFALAIAWAMELVCKMKLTEAPPSITRSEVRKLVENRCSDIERARKDLGYEPRVDRNTALRTIVEDLKRDGWGRHTLLVPGLGYWICIPLGIWLNAVAAFKALCPAFLAPVQRFSLYIHLAVFRKLWIVRLVCVLAILAHVLEGWYAFVRAKRAGHGDTAPRWLIQTLILGYPSTRLVMRLLS 364          
BLAST of mRNA_L-digitata_M_contig9916.1.1 vs. uniprot
Match: A0A6H5LLR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLR3_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.180e-22
Identity = 47/72 (65.28%), Postives = 61/72 (84.72%), Query Frame = 0
Query:  188 QRASLYIHLAICRRLFVVRAIAVLLLLLHVVEGLYAYTRAQRAGHKDTAPLWLIQTVIIGFPSTRLVMRLLS 259
            Q  +L+IHLA+ R+L++VR + VL +L HV+EG YA+ RA+RAGH DTAP WLIQT+I+G+PSTRLVMRLLS
Sbjct:    8 QTTALHIHLAVFRKLWIVRLVCVLAILAHVLEGWYAFVRAKRAGHGDTAPRWLIQTLILGYPSTRLVMRLLS 79          
BLAST of mRNA_L-digitata_M_contig9916.1.1 vs. uniprot
Match: A0A661N096_9DELT (Steroid delta-isomerase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661N096_9DELT)

HSP 1 Score: 74.3 bits (181), Expect = 1.040e-11
Identity = 53/137 (38.69%), Postives = 70/137 (51.09%), Query Frame = 0
Query:    3 YVDNLVEAQVLAGRKLMEGAADAQAGGAGWSTHAPVCSGQAYFVTDGRPCNLQAFADGVLDGLDFSTSKVVRVPKVIALATAGMAELVCKVRLTRTPVWTRKEVRTLTEDRTSSIARIRTDLGYEPIVDAGTALRST 139
            Y+DNLV+AQ+ A  +L+EG+              PVC GQAYFVTDG P N  AF+  ++  +      V R+P  +A   A   E V +V     P  +  EVR    D   SI + R DLGY+P+VD    LR T
Sbjct:  215 YIDNLVDAQIRAAERLVEGS--------------PVC-GQAYFVTDGDPINTGAFSQTLVSDMGLDVRSV-RIPGRVARVLATAGERVFQVLGKPKPPVSIVEVRLCVRDSYFSIDKARRDLGYQPLVDTREGLRRT 335          
BLAST of mRNA_L-digitata_M_contig9916.1.1 vs. uniprot
Match: D8RPB8_SELML (3Beta_HSD domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RPB8_SELML)

HSP 1 Score: 70.5 bits (171), Expect = 3.270e-10
Identity = 78/264 (29.55%), Postives = 119/264 (45.08%), Query Frame = 0
Query:    2 VYVDNLVEAQVLAGRKLMEGAADAQAGGAGWSTHAPVCSGQAYFVTDGRPCNLQAFADGVLDGLDFS-TSKVVRVPKVIALA-----TAGMAELVCKVRLTRTPVWTRKEVRTLTEDRTSSIARIRTDLGYEPIVDAGTALRSTVAGLKEAGWGRHTFL-VPGLGYWIAIPLYLWFLTISGFESACPAFLAP---VQRASLYIHLAICRRLFVVRAIAVLLLLLHVVEGLYAYTRAQRAGHKDTAPLWLIQTVIIGFPSTRLVM 255
            +YVDNLV A +LA   L++   D    G       P  +G+AYFV+D  P N   F   +++GL++    + + V   +  A       G+     +      P+    EV  +      S  R R +LGY P++D    L  T+A LKE    +H  L  P  G+WI I   ++ L  S F      F+ P   V+   + +H ++ R L +V   A L    H  E  YA+  A+     + A  W  QT+ +GFPS RL++
Sbjct:  230 IYVDNLVNAHLLASMALLD---DVPGTGG-----VPTAAGKAYFVSDDAPTNYFEFVRPLVEGLNYKFPQRELSVSAALRFAWFFWGLYGLLYPWLERSWIPDPLLLPSEVHKVGITHYFSSLRARQELGYVPLIDQKEGLERTLAYLKEK---KHRELETPTFGWWIGILAAMFALFCSAFVP--DPFMGPFECVRSLGILLHGSV-RNLKLVFLTACLA---HAAEASYAWKLAKSVD-PENAKGWFWQTLALGFPSLRLLL 475          
BLAST of mRNA_L-digitata_M_contig9916.1.1 vs. uniprot
Match: A0A520YHQ8_9DELT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A520YHQ8_9DELT)

HSP 1 Score: 66.2 bits (160), Expect = 6.770e-9
Identity = 47/138 (34.06%), Postives = 72/138 (52.17%), Query Frame = 0
Query:    2 VYVDNLVEAQVLAGRKLMEGAADAQAGGAGWSTHAPVCSGQAYFVTDGRPCNLQAFADGVLDGLDFSTSKVVRVPKVIALATAGMAELVCKVRLTRTPVWTRKEVRTLTEDRTSSIARIRTDLGYEPIVDAGTALRST 139
            VY+DNLV+A++ A  +L+EG+              PVC G+AYF++D  P N   F+  ++  +   T ++VRVP  +A A A   E + +      P++T   V+    D   SI + + DLGY P+VD    LR T
Sbjct:  228 VYIDNLVDAELRAAERLVEGS--------------PVC-GEAYFLSDETPINAGQFSIELVANMGLQT-RLVRVPDPLARAMAVAMERIYQALGVVKPLFTEANVKLCDIDHYFSIDKAKRDLGYRPLVDTKEGLRRT 349          
BLAST of mRNA_L-digitata_M_contig9916.1.1 vs. uniprot
Match: A0A2D9SZZ5_9DELT (3Beta_HSD domain-containing protein n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2D9SZZ5_9DELT)

HSP 1 Score: 66.6 bits (161), Expect = 6.770e-9
Identity = 78/261 (29.89%), Postives = 109/261 (41.76%), Query Frame = 0
Query:    2 VYVDNLVEAQVLAGRKLMEGAADAQAGGAGWSTHAPVCSGQAYFVTDGRPCNLQAFADGVLD--GLDFSTSKVVRVPKVIALATAGMAELVCKVRLTRTPVWTRKEVRTLTEDRTSSIARIRTDLGYEPIVDAGTALRSTVAGLKEAGWGRHTFLV-----PGLGYWIAIPLYLWFLTISGFESACPAFLAPVQRASLYIHLAICRRLFVVRAIAVLLLLLHVVEGLYAYTRAQRAGHKDTAPLWLIQTVIIGFPSTRLVM 255
            VY+D+LV A  +A   L E  ADA+              G+AYF+ DG P N   F    LD  G+ F T  V   P  +      + EL+  +   R P+ T  E+  L  D   SI     D G+ P V      R     + +      T +      P LG+WIAI   +  L    F     AF           H+       V++ IAV+ L LH  E  YAY  A++ G    A  W  QT+++G+PS RL++
Sbjct:  285 VYIDDLVAAHRMAAEALTE--ADAKN------------RGRAYFINDGEPQNYFHFFRPTLDALGIPFPTRTV---PAALVEPVTQLGELLHSLGGPRPPLTT-MELDKLRHDHFFSIGGAARDFGWRPEVPPAEGHRRCADWVAQLADEERTRMADDVERPALGWWIAIGGGMGLLLALAFVPEAYAFWRR--------HVGPMMPRRVLQGIAVVALGLHAGEAAYAYRVARKHG-LPKAGKWAWQTLLLGYPSLRLLL 518          
BLAST of mRNA_L-digitata_M_contig9916.1.1 vs. uniprot
Match: A0A0S8EW04_9DELT (3Beta_HSD domain-containing protein n=1 Tax=Myxococcales bacterium SG8_38_1 TaxID=1703408 RepID=A0A0S8EW04_9DELT)

HSP 1 Score: 62.0 bits (149), Expect = 1.750e-7
Identity = 45/144 (31.25%), Postives = 70/144 (48.61%), Query Frame = 0
Query:    2 VYVDNLVEAQVLAGRKLMEGAADAQAGGAGWSTHAPVCSGQAYFVTDGRPCNLQAFADGVLDGLDFSTSKVVRVPKVIALATAGMAELVCKVRLTRTPVWTRKEVRTLTEDRTSSIARIRTDLGYEPIVDAGTALRSTVAGLKE 145
            VY+D+LVE ++ A  +L+EG+              PVC GQAYF++D  P N   F+  +   +      +VRVP  +A A   + E   ++     P++T   V+    D   SI + + DLGY P+VD    +R T    +E
Sbjct:  212 VYIDSLVEGEIRAAERLVEGS--------------PVC-GQAYFLSDDTPINAGQFSIDLAKHMGLQVP-LVRVPDPLARAVGTVWERFYQIFGAPKPMFTLANVKLCDIDHYFSIEKAKRDLGYAPLVDTDEGIRRTAVEARE 339          
BLAST of mRNA_L-digitata_M_contig9916.1.1 vs. uniprot
Match: A0A3S7KA94_9GAMM (Radical SAM protein n=12 Tax=Xanthomonadaceae TaxID=32033 RepID=A0A3S7KA94_9GAMM)

HSP 1 Score: 61.6 bits (148), Expect = 2.330e-7
Identity = 39/114 (34.21%), Postives = 62/114 (54.39%), Query Frame = 0
Query:   39 CSGQAYFVTDGRPCNLQAFADGVLDGLDFSTSKVVRVPKVIALATAGMAELVCKVRLTRT-PVWTRKEVRTLTEDRTSSIARIRTDLGYEPIVDAGTALRSTVAGLKEAGWGRH 151
            CSG+AY ++ G P ++ A  +G+ + +D    ++  VP+ +ALA AG+AE V ++R  R  P  TR  V  L   +T  I+  R DLGY+P      AL++     K+    +H
Sbjct:  221 CSGRAYNISAGTPLHVHALVNGLFEAMDLQV-RLRPVPRTLALAAAGVAEAVARLRPGRPEPRLTRYGVGVLGYSQTLDISAARRDLGYDPRTGVQAALQAFATHWKQHACKQH 333          
BLAST of mRNA_L-digitata_M_contig9916.1.1 vs. uniprot
Match: A0A2I0WLF7_9ASPA (3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WLF7_9ASPA)

HSP 1 Score: 58.2 bits (139), Expect = 4.500e-6
Identity = 67/281 (23.84%), Postives = 120/281 (42.70%), Query Frame = 0
Query:    2 VYVDNLVEAQVLAGRKLMEGAADAQAGGAGWSTHAPVCSGQAYFVTDGRPCN-LQAFADGVLDGLDFSTSKV---VRVPKVIA----------------------LATAGMAELVCKVRLTRTPVWTRKEVRTLTEDRTSSIARIRTDLGYEPIVDAGTALRSTVAGLKEAGWGRHTFLVPGLGYWIAIPLYLWFLTISGFESACPAFLAPVQRASLYIHLAICRRLFVVRAIAVLLLLLHVVEGLYAYTRAQRAGHKDTAPLWLIQTVIIGFPSTRLVMR 256
            VYVDNLV+A +LA   L++  +  +          P+ +GQAYF++DG P N   +    +   LD++  K+   VR+  +++                      L        VC +      +      R       S + +   +LGY P+V     L  T++  K+    +     P + +WI     +  L  + F + C   L  +   SL++     R +F +R +  +   LH+ E +Y +  A+R    + AP W +QT ++G+PST+L ++
Sbjct:  241 VYVDNLVQALILASVGLLDDISGREGN--------PIAAGQAYFISDGSPVNTFDSIISPLFKSLDYNVPKLTIHVRLALILSQIFWFISMLFYPFLNQPWVPGPLLLPAEVYKVCSIVAAAFAIDFTMITRIGVTHYFSHL-KATEELGYVPMVSPHEGLNRTISYWKDRK--QKEINRPNILFWIFCIGGMLALFYTAFLTPCGP-LRWLNSLSLFLF----RSVFNLRLVFYIAAALHISEAIYIWLLARRKDPAN-APGWFLQTFLLGYPSTKLFLK 504          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9916.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LSA6_ECTSI3.080e-10361.903Beta_HSD domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5LLR3_9PHAE1.180e-2265.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A661N096_9DELT1.040e-1138.69Steroid delta-isomerase n=1 Tax=Deltaproteobacteri... [more]
D8RPB8_SELML3.270e-1029.553Beta_HSD domain-containing protein n=2 Tax=Selagi... [more]
A0A520YHQ8_9DELT6.770e-934.06NAD-dependent epimerase/dehydratase family protein... [more]
A0A2D9SZZ5_9DELT6.770e-929.893Beta_HSD domain-containing protein n=1 Tax=Sandar... [more]
A0A0S8EW04_9DELT1.750e-731.253Beta_HSD domain-containing protein n=1 Tax=Myxoco... [more]
A0A3S7KA94_9GAMM2.330e-734.21Radical SAM protein n=12 Tax=Xanthomonadaceae TaxI... [more]
A0A2I0WLF7_9ASPA4.500e-623.843beta-hydroxysteroid-dehydrogenase/decarboxylase i... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028110Transmembrane protein 254PFAMPF14934DUF4499coord: 168..254
e-value: 1.5E-16
score: 60.4
NoneNo IPR availableGENE3D3.40.50.720coord: 1..149
e-value: 7.4E-12
score: 47.0
IPR0022253-beta hydroxysteroid dehydrogenase/isomerasePFAMPF010733Beta_HSDcoord: 2..75
e-value: 9.6E-7
score: 28.1
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9916contigL-digitata_M_contig9916:2860..7868 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9916.1.1mRNA_L-digitata_M_contig9916.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9916 301..9221 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9916.1.1 ID=prot_L-digitata_M_contig9916.1.1|Name=mRNA_L-digitata_M_contig9916.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=260bp
MVYVDNLVEAQVLAGRKLMEGAADAQAGGAGWSTHAPVCSGQAYFVTDGR
PCNLQAFADGVLDGLDFSTSKVVRVPKVIALATAGMAELVCKVRLTRTPV
WTRKEVRTLTEDRTSSIARIRTDLGYEPIVDAGTALRSTVAGLKEAGWGR
HTFLVPGLGYWIAIPLYLWFLTISGFESACPAFLAPVQRASLYIHLAICR
RLFVVRAIAVLLLLLHVVEGLYAYTRAQRAGHKDTAPLWLIQTVIIGFPS
TRLVMRLLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028110TMEM254
IPR0022253Beta_OHSteriod_DH/Estase
IPR036291NAD(P)-bd_dom_sf