prot_L-digitata_M_contig9914.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9914.1.1
Unique Nameprot_L-digitata_M_contig9914.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length62
Homology
BLAST of mRNA_L-digitata_M_contig9914.1.1 vs. uniprot
Match: D7G6G8_ECTSI (Dynein 18 kDa light chain, flagellar outer arm n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6G8_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 4.640e-33
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0
Query:    1 MSLSQEEIDACHEAFREVDVGRRGHINVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGFV 62
            MSLSQEEIDAC EAFREVDVGRRG+INVWELRIVLQELGQNPTDKEFFEVVSTVDREMKG +
Sbjct:    1 MSLSQEEIDACQEAFREVDVGRRGNINVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGLI 62          
BLAST of mRNA_L-digitata_M_contig9914.1.1 vs. uniprot
Match: F0WBF6_9STRA (Dynein light chain putative n=15 Tax=Oomycota TaxID=4762 RepID=F0WBF6_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.120e-14
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 MSLSQEEIDACHEAFREVDVGRRGHINVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGFV 62
            M L+Q+EIDAC EAF   D  R G I+VWELR VLQ +GQ PT++E F+++S VD +M G +
Sbjct:   28 MVLAQDEIDACREAFLAFDKDRSGTIDVWELRQVLQAMGQQPTEEELFQMISEVDNDMSGAI 89          
BLAST of mRNA_L-digitata_M_contig9914.1.1 vs. uniprot
Match: A0A485KGT0_9STRA (Aste57867_5639 protein n=8 Tax=Oomycota TaxID=4762 RepID=A0A485KGT0_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.770e-14
Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 MSLSQEEIDACHEAFREVDVGRRGHINVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGFV 62
            M L+Q+EIDAC EAF   D  R G I+VWELR VL+ +GQ PT++E F+++S VD +M G +
Sbjct:    1 MVLAQDEIDACREAFLAFDKDRSGTIDVWELRQVLEAMGQQPTEEELFQMISEVDEDMSGAI 62          
BLAST of mRNA_L-digitata_M_contig9914.1.1 vs. uniprot
Match: A0A812KW91_SYMMI (Calmodulin n=6 Tax=cellular organisms TaxID=131567 RepID=A0A812KW91_SYMMI)

HSP 1 Score: 72.0 bits (175), Expect = 1.770e-14
Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 MSLSQEEIDACHEAFREVDVGRRGHINVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGFV 62
            M LSQEEID C EAF   D  R G I+VWELR VL+ +GQ PT++E F+++S VD  M G +
Sbjct:    1 MVLSQEEIDGCREAFLAFDKDRSGTIDVWELRQVLEAMGQKPTEEELFQMISEVDENMSGSI 62          
BLAST of mRNA_L-digitata_M_contig9914.1.1 vs. uniprot
Match: A0A812ZLM1_SYMMI (Calmodulin n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZLM1_SYMMI)

HSP 1 Score: 72.0 bits (175), Expect = 1.940e-14
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 MSLSQEEIDACHEAFREVDVGRRGHINVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGFV 62
            M LSQEEID C EAF   D  R G I++WELR VL+ +GQ+PT++E F+++S VD  M G +
Sbjct:    5 MVLSQEEIDGCREAFLAFDKDRSGTIDIWELRQVLEAMGQSPTEEELFQMISEVDENMSGAI 66          
BLAST of mRNA_L-digitata_M_contig9914.1.1 vs. uniprot
Match: A0A2D4C536_PYTIN (Dynein light chain putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C536_PYTIN)

HSP 1 Score: 72.0 bits (175), Expect = 2.310e-14
Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 MSLSQEEIDACHEAFREVDVGRRGHINVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGFV 62
            M L+Q+EIDAC EAF   D  R G I+VWELR VL+ +GQ PT++E F+++S VD +M G +
Sbjct:   27 MVLAQDEIDACREAFLAFDKDRSGTIDVWELRQVLEAMGQQPTEEELFQMISEVDEDMSGAI 88          
BLAST of mRNA_L-digitata_M_contig9914.1.1 vs. uniprot
Match: A0A1V9ZMK4_9STRA (EF hand-containing protein n=2 Tax=Oomycota TaxID=4762 RepID=A0A1V9ZMK4_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.410e-14
Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 MSLSQEEIDACHEAFREVDVGRRGHINVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGFV 62
            M L+Q+EIDAC EAF   D  R G I+VWELR VL+ +GQ PT++E F+++S VD +M G +
Sbjct:    1 MVLAQDEIDACREAFLAFDKDRSGTIDVWELRQVLEAMGQQPTEEELFQMISEVDEDMSGAI 62          
BLAST of mRNA_L-digitata_M_contig9914.1.1 vs. uniprot
Match: A0A6U4JW26_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JW26_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 6.230e-14
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 MSLSQEEIDACHEAFREVDVGRRGHINVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGFV 62
            M L+QEEID C EAF   D  R G I+VWELR VL+ +GQ PT++E F+++S VD  M G +
Sbjct:   48 MVLTQEEIDGCREAFLAFDKDRSGTIDVWELRQVLEAMGQKPTEEELFQMISEVDENMSGSI 109          
BLAST of mRNA_L-digitata_M_contig9914.1.1 vs. uniprot
Match: A0A7R9Z009_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z009_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 7.650e-14
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 MSLSQEEIDACHEAFREVDVGRRGHINVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGFV 62
            M L+QEEID C +AF   D  R G I+VWELR VL+ +GQ PT++E F+++S VD  M G +
Sbjct:    5 MPLTQEEIDGCKDAFLAFDKDRSGSIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSI 66          
BLAST of mRNA_L-digitata_M_contig9914.1.1 vs. uniprot
Match: A0A835Z187_9STRA (EF hand-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z187_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.000e-13
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 MSLSQEEIDACHEAFREVDVGRRGHINVWELRIVLQELGQNPTDKEFFEVVSTVDREMKGFV 62
            M L+QEEID C +AF   D  R G+I+VWELR VL+ +GQ PT++E F+++S VD  M G +
Sbjct:    1 MVLTQEEIDGCRDAFLAFDKDRSGNIDVWELRQVLEAMGQKPTEEELFQMISEVDDNMSGSI 62          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9914.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6G8_ECTSI4.640e-3393.55Dynein 18 kDa light chain, flagellar outer arm n=2... [more]
F0WBF6_9STRA1.120e-1454.84Dynein light chain putative n=15 Tax=Oomycota TaxI... [more]
A0A485KGT0_9STRA1.770e-1453.23Aste57867_5639 protein n=8 Tax=Oomycota TaxID=4762... [more]
A0A812KW91_SYMMI1.770e-1454.84Calmodulin n=6 Tax=cellular organisms TaxID=131567... [more]
A0A812ZLM1_SYMMI1.940e-1453.23Calmodulin n=1 Tax=Symbiodinium microadriaticum Ta... [more]
A0A2D4C536_PYTIN2.310e-1453.23Dynein light chain putative n=1 Tax=Pythium insidi... [more]
A0A1V9ZMK4_9STRA2.410e-1453.23EF hand-containing protein n=2 Tax=Oomycota TaxID=... [more]
A0A6U4JW26_9STRA6.230e-1453.23Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9Z009_9STRA7.650e-1451.61Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A835Z187_9STRA1.000e-1351.61EF hand-containing protein n=1 Tax=Tribonema minus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 1..62
e-value: 6.2E-12
score: 47.2
NoneNo IPR availablePANTHERPTHR23050:SF420EF HAND-CONTAINING PROTEINcoord: 2..60
NoneNo IPR availablePANTHERPTHR23050CALCIUM BINDING PROTEINcoord: 2..60
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 6..41
score: 9.324862
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 3..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9914contigL-digitata_M_contig9914:7649..9361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9914.1.1mRNA_L-digitata_M_contig9914.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9914 7649..9361 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9914.1.1 ID=prot_L-digitata_M_contig9914.1.1|Name=mRNA_L-digitata_M_contig9914.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=62bp
MSLSQEEIDACHEAFREVDVGRRGHINVWELRIVLQELGQNPTDKEFFEV
VSTVDREMKGFV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair