prot_L-digitata_M_contig991.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig991.1.1
Unique Nameprot_L-digitata_M_contig991.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length239
Homology
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BLAST of mRNA_L-digitata_M_contig991.1.1 vs. uniprot
Match: D7G7N7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N7_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 7.670e-44
Identity = 89/131 (67.94%), Postives = 97/131 (74.05%), Query Frame = 0 
Query:  106 WAEERFPGCSTVVSPVTRLSGLLAEVWETLADPSAVQAGKPRVLAFPDCPAVASPRGLQSLYEHLEVCQDACEQFGTTVSIVPHPKGGNSDAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDRSLLDDD 236
            WAE +FPGCSTV+S  TRLSGLLA+VWETLADPSA +A +PRVL FPDCPAVA  RGLQ+LYEHLEVCQDACEQFGT VSIVPHP+GG + AP                       XXXXXXIDRSLLDDD
Sbjct:   20 WAESQFPGCSTVLSKATRLSGLLADVWETLADPSAAEAERPRVLMFPDCPAVAEARGLQNLYEHLEVCQDACEQFGTMVSIVPHPRGGRTGAPAPSLVVQVVPGAGGGDDFGYDPDXXXXXXIDRSLLDDD 150
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BLAST of mRNA_L-digitata_M_contig991.1.1 vs. uniprot
Match: A0A6H5L2Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q2_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 1.330e-43
Identity = 90/131 (68.70%), Postives = 98/131 (74.81%), Query Frame = 0 
Query:  106 WAEERFPGCSTVVSPVTRLSGLLAEVWETLADPSAVQAGKPRVLAFPDCPAVASPRGLQSLYEHLEVCQDACEQFGTTVSIVPHPKGGNSDAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDRSLLDDD 236
            WAE +FPGCSTV+S  TRLSGLLA+VWETLADPSAV+A +PRVL FPDCPAVA  RGLQ+LYEHLEVCQDACEQFGT VSIVPHP+GG + AP                       XXXXXXIDRSLLDDD
Sbjct:   82 WAESQFPGCSTVLSKATRLSGLLADVWETLADPSAVEAERPRVLMFPDCPAVAEARGLQNLYEHLEVCQDACEQFGTMVSIVPHPRGGKNGAPAPSLVVQVVPGAGGGDDFGYDPDXXXXXXIDRSLLDDD 212
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig991.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7N7_ECTSI7.670e-4467.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2Q2_9PHAE1.330e-4368.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig991contigL-digitata_M_contig991:14031..19150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig991.1.1mRNA_L-digitata_M_contig991.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig991 14031..19150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig991.1.1 ID=prot_L-digitata_M_contig991.1.1|Name=mRNA_L-digitata_M_contig991.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=239bp
LIAKPRARPRQRVAMSSTICTIALLTASISPFSHGFVATSPPTSSTPRRS
AHNFRLGGGTPHVAPNVAAESRQRLPGHASSLRRSAGRAMAMSAATESSA
TASNVWAEERFPGCSTVVSPVTRLSGLLAEVWETLADPSAVQAGKPRVLA
FPDCPAVASPRGLQSLYEHLEVCQDACEQFGTTVSIVPHPKGGNSDAPAP
ALVVQVVAGAGGEDDFDYDPDWDGDWDIDRSLLDDDDDE
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